RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 GRIK2Q13002 908 aa16.28■□□□□ 0.2
NME3-211ENST00000568561 SYCP2LQ5T4T6 812 aa16.28■□□□□ 0.2
NME3-211ENST00000568561 RSRC2Q7L4I2 434 aaKnown RBP16.28■□□□□ 0.2
NME3-211ENST00000568561 TADA2BQ86TJ2 420 aa16.28■□□□□ 0.2
NME3-211ENST00000568561 PIGZQ86VD9 579 aa16.28■□□□□ 0.2
NME3-211ENST00000568561 SLC4A11Q8NBS3 891 aa16.28■□□□□ 0.2
NME3-211ENST00000568561 NDRG1Q92597 394 aaKnown RBP16.28■□□□□ 0.2
NME3-211ENST00000568561 SPATA32Q96LK8 384 aa16.28■□□□□ 0.2
NME3-211ENST00000568561 MIR1-1HGQ9H1L0 117 aa16.28■□□□□ 0.2
NME3-211ENST00000568561 TMEM8AQ9HCN3 771 aa16.28■□□□□ 0.2
NME3-211ENST00000568561 MARCH2Q9P0N8 246 aa16.28■□□□□ 0.2
NME3-211ENST00000568561 THAP10Q9P2Z0 257 aaPredicted RBP16.28■□□□□ 0.2
NME3-211ENST00000568561 USP25Q9UHP3 1055 aa16.28■□□□□ 0.2
NME3-211ENST00000568561 SLC27A6Q9Y2P4 619 aa16.28■□□□□ 0.2
NME3-211ENST00000568561 TMEM131Q92545 1883 aa16.28■□□□□ 0.2
NME3-211ENST00000568561 NBEAQ8NFP9 2946 aa16.27■□□□□ 0.2
NME3-211ENST00000568561 SLC12A8A0AV02 714 aa16.27■□□□□ 0.2
NME3-211ENST00000568561 TULP2O00295 520 aa16.27■□□□□ 0.2
NME3-211ENST00000568561 GJB3O75712 270 aa16.27■□□□□ 0.2
NME3-211ENST00000568561 PRKCHP24723 683 aa16.27■□□□□ 0.2
NME3-211ENST00000568561 PSMC2P35998 433 aaKnown RBP16.27■□□□□ 0.2
NME3-211ENST00000568561 RAD23BP54727 409 aa16.27■□□□□ 0.2
NME3-211ENST00000568561 COG7P83436 770 aa16.27■□□□□ 0.2
NME3-211ENST00000568561 DPYDQ12882 1025 aa16.27■□□□□ 0.2
NME3-211ENST00000568561 ADAM9Q13443 819 aa16.27■□□□□ 0.2
NME3-211ENST00000568561 ZNF234Q14588 700 aa16.27■□□□□ 0.2
NME3-211ENST00000568561 NFIL3Q16649 462 aa16.27■□□□□ 0.2
NME3-211ENST00000568561 WDR45BQ5MNZ6 344 aa16.27■□□□□ 0.2
NME3-211ENST00000568561 ANKS1BQ7Z6G8 1248 aa16.27■□□□□ 0.2
NME3-211ENST00000568561 SMYD4Q8IYR2 804 aaPredicted RBP16.27■□□□□ 0.2
NME3-211ENST00000568561 CCDC150Q8NCX0 1101 aa16.27■□□□□ 0.2
NME3-211ENST00000568561 FOXJ1Q92949 421 aa16.27■□□□□ 0.2
NME3-211ENST00000568561 PIWIL1Q96J94 861 aaKnown RBP16.27■□□□□ 0.2
NME3-211ENST00000568561 CIPCQ9C0C6 399 aa16.27■□□□□ 0.2
NME3-211ENST00000568561 FAM124BQ9H5Z6 455 aaPredicted RBP16.27■□□□□ 0.2
NME3-211ENST00000568561 CISHQ9NSE2 258 aa16.27■□□□□ 0.2
NME3-211ENST00000568561 WSB2Q9NYS7 404 aaPredicted RBP16.27■□□□□ 0.2
NME3-211ENST00000568561 USP36Q9P275 1121 aaKnown RBP16.27■□□□□ 0.2
NME3-211ENST00000568561 SUSD2Q9UGT4 822 aa16.27■□□□□ 0.2
NME3-211ENST00000568561 PLXNB3Q9ULL4 1909 aa16.27■□□□□ 0.19
NME3-211ENST00000568561 PTPRBP23467 1997 aa16.26■□□□□ 0.19
NME3-211ENST00000568561 TP53BP1Q12888 1972 aaPredicted RBP16.26■□□□□ 0.19
NME3-211ENST00000568561 MYL1P05976 194 aa16.26■□□□□ 0.19
NME3-211ENST00000568561 HLA-EP13747 358 aa16.26■□□□□ 0.19
NME3-211ENST00000568561 GNSP15586 552 aa16.26■□□□□ 0.19
NME3-211ENST00000568561 CHKAP35790 457 aa16.26■□□□□ 0.19
NME3-211ENST00000568561 MXI1P50539 228 aa16.26■□□□□ 0.19
NME3-211ENST00000568561 TPMTP51580 245 aa16.26■□□□□ 0.19
NME3-211ENST00000568561 YWHAGP61981 247 aaKnown RBP eCLIP16.26■□□□□ 0.19
NME3-211ENST00000568561 GOLGA7BQ2TAP0 167 aa16.26■□□□□ 0.19
NME3-211ENST00000568561 ZCWPW2Q504Y3 356 aa16.26■□□□□ 0.19
NME3-211ENST00000568561 DCAF12L1Q5VU92 463 aa16.26■□□□□ 0.19
NME3-211ENST00000568561 TMEM215Q68D42 235 aa16.26■□□□□ 0.19
NME3-211ENST00000568561 KRT39Q6A163 491 aa16.26■□□□□ 0.19
NME3-211ENST00000568561 RAB44Q7Z6P3 723 aaPredicted RBP16.26■□□□□ 0.19
NME3-211ENST00000568561 FAM124AQ86V42 546 aa16.26■□□□□ 0.19
NME3-211ENST00000568561 TMPRSS6Q8IU80 811 aa16.26■□□□□ 0.19
NME3-211ENST00000568561 NAXDQ8IW45 347 aa16.26■□□□□ 0.19
NME3-211ENST00000568561 ZNF276Q8N554 614 aa16.26■□□□□ 0.19
NME3-211ENST00000568561 PNPLA1Q8N8W4 532 aa16.26■□□□□ 0.19
NME3-211ENST00000568561 DDI1Q8WTU0 396 aa16.26■□□□□ 0.19
NME3-211ENST00000568561 TATDN2Q93075 761 aa16.26■□□□□ 0.19
NME3-211ENST00000568561 CCDC47Q96A33 483 aaKnown RBP16.26■□□□□ 0.19
NME3-211ENST00000568561 SIPA1Q96FS4 1042 aa16.26■□□□□ 0.19
NME3-211ENST00000568561 CDK5RAP1Q96SZ6 601 aaKnown RBP16.26■□□□□ 0.19
NME3-211ENST00000568561 ULBP1Q9BZM6 244 aa16.26■□□□□ 0.19
NME3-211ENST00000568561 DCLK3Q9C098 648 aa16.26■□□□□ 0.19
NME3-211ENST00000568561 GOLPH3LQ9H4A5 285 aa16.26■□□□□ 0.19
NME3-211ENST00000568561 IL21RQ9HBE5 538 aa16.26■□□□□ 0.19
NME3-211ENST00000568561 ZNF510Q9Y2H8 683 aa16.26■□□□□ 0.19
NME3-211ENST00000568561 LAMA5O15230 3695 aa16.26■□□□□ 0.19
NME3-211ENST00000568561 A0A1B0GTW7 788 aa16.25■□□□□ 0.19
NME3-211ENST00000568561 SYNCRIPO60506 623 aaKnown RBP16.25■□□□□ 0.19
NME3-211ENST00000568561 TSPAN3O60637 253 aa16.25■□□□□ 0.19
NME3-211ENST00000568561 CYBBP04839 570 aa16.25■□□□□ 0.19
NME3-211ENST00000568561 EPHX1P07099 455 aa16.25■□□□□ 0.19
NME3-211ENST00000568561 FTH1P19P0C7X4 201 aa16.25■□□□□ 0.19
NME3-211ENST00000568561 RPL13P26373 211 aaKnown RBP16.25■□□□□ 0.19
NME3-211ENST00000568561 TKTL1P51854 596 aa16.25■□□□□ 0.19
NME3-211ENST00000568561 COPAP53621 1224 aa16.25■□□□□ 0.19
NME3-211ENST00000568561 ENPP2Q13822 863 aa16.25■□□□□ 0.19
NME3-211ENST00000568561 TRIP6Q15654 476 aaKnown RBP16.25■□□□□ 0.19
NME3-211ENST00000568561 RAB41Q5JT25 222 aa16.25■□□□□ 0.19
NME3-211ENST00000568561 GUF1Q8N442 669 aaKnown RBP16.25■□□□□ 0.19
NME3-211ENST00000568561 ZNF366Q8N895 744 aa16.25■□□□□ 0.19
NME3-211ENST00000568561 RBBP8NLQ8NC74 664 aaPredicted RBP16.25■□□□□ 0.19
NME3-211ENST00000568561 UCMAQ8WVF2 138 aa16.25■□□□□ 0.19
NME3-211ENST00000568561 TMEM176AQ96HP8 235 aa16.25■□□□□ 0.19
NME3-211ENST00000568561 DNAI2Q9GZS0 605 aa16.25■□□□□ 0.19
NME3-211ENST00000568561 ITM2CQ9NQX7 267 aa16.25■□□□□ 0.19
NME3-211ENST00000568561 ELOVL2Q9NXB9 296 aa16.25■□□□□ 0.19
NME3-211ENST00000568561 STRIP2Q9ULQ0 834 aa16.25■□□□□ 0.19
NME3-211ENST00000568561 SLCO1B1Q9Y6L6 691 aa16.25■□□□□ 0.19
NME3-211ENST00000568561 FASNP49327 2511 aaKnown RBP16.24■□□□□ 0.19
NME3-211ENST00000568561 APC2O95996 2303 aa16.24■□□□□ 0.19
NME3-211ENST00000568561 H0Y626 953 aa16.24■□□□□ 0.19
NME3-211ENST00000568561 TRIM16O95361 564 aa16.24■□□□□ 0.19
NME3-211ENST00000568561 KRT85P78386 507 aa16.24■□□□□ 0.19
NME3-211ENST00000568561 BNC1Q01954 994 aa16.24■□□□□ 0.19
NME3-211ENST00000568561 ZNF423Q2M1K9 1284 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms