RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 PNPLA8Q9NP80 782 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 ADAM21Q9UKJ8 722 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 MAGED2Q9UNF1 606 aaPredicted RBP7.32□□□□□ -1.24
SMG1-215ENST00000568239 SNX10Q9Y5X0 201 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 NR2E3Q9Y5X4 410 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 CDY1Q9Y6F8 540 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 FNDC1Q4ZHG4 1894 aaPredicted RBP7.32□□□□□ -1.24
SMG1-215ENST00000568239 PTPRDP23468 1912 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 PDE4DIPQ5VU43 2346 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 NLRC5Q86WI3 1866 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 A0A1W2PQH9 124 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 OR6C75A6NL08 312 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 GOLGA8KD6RF30 607 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 H3BRJ5 948 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 MSI1O43347 362 aaKnown RBP7.32□□□□□ -1.24
SMG1-215ENST00000568239 MOCS2O96007 188 aaPredicted RBP7.32□□□□□ -1.24
SMG1-215ENST00000568239 F9P00740 461 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 SRGAP2BP0DMP2 458 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 ZFXP17010 805 aaPredicted RBP7.32□□□□□ -1.24
SMG1-215ENST00000568239 FGFR3P22607 806 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 STIP1P31948 543 aaKnown RBP7.32□□□□□ -1.24
SMG1-215ENST00000568239 RPL22P35268 128 aaKnown RBP7.32□□□□□ -1.24
SMG1-215ENST00000568239 SLCO1A2P46721 670 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 PGFP49763 221 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 ZNF844Q08AG5 666 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 DUSP4Q13115 394 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 TTMPQ5BVD1 217 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 HIBCHQ6NVY1 386 aaPredicted RBP7.32□□□□□ -1.24
SMG1-215ENST00000568239 VSTM1Q6UX27 236 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 RNF19BQ6ZMZ0 732 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 OTOP2Q7RTS6 562 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 CRIPAKQ8N1N5 446 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 CCNYQ8ND76 341 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 DQX1Q8TE96 717 aaKnown RBP7.32□□□□□ -1.24
SMG1-215ENST00000568239 IRGQQ8WZA9 623 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 FUBP3Q96I24 572 aaKnown RBP eCLIP7.32□□□□□ -1.24
SMG1-215ENST00000568239 RBM15Q96T37 977 aaKnown RBP eCLIP7.32□□□□□ -1.24
SMG1-215ENST00000568239 ADAM7Q9H2U9 754 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 WDR6Q9NNW5 1121 aaKnown RBP7.32□□□□□ -1.24
SMG1-215ENST00000568239 ANLNQ9NQW6 1124 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 AAASQ9NRG9 546 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 ABCC13Q9NSE7 274 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 MRPL42Q9Y6G3 142 aaKnown RBP7.32□□□□□ -1.24
SMG1-215ENST00000568239 USP3Q9Y6I4 520 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 TANC1Q9C0D5 1861 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 FAM72CH0Y354 149 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 TRIM66O15016 1216 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 DGKIO75912 1065 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 AMHP03971 560 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 HPDP32754 393 aaPredicted RBP7.32□□□□□ -1.24
SMG1-215ENST00000568239 CA8P35219 290 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 TPI1P60174 286 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 DEFB103AP81534 67 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 AP1B1Q10567 949 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 SLC10A2Q12908 348 aaPredicted RBP7.32□□□□□ -1.24
SMG1-215ENST00000568239 FAXCQ5TGI0 409 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 FAM72AQ5TYM5 149 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 NCBP2-AS2Q69YL0 99 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 FAM72DQ6L9T8 149 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 RHBDF2Q6PJF5 856 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 KCNT2Q6UVM3 1135 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 DENND5BQ6ZUT9 1274 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 ANKS3Q6ZW76 656 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 NECAB2Q7Z6G3 386 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 FAM72BQ86X60 149 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 FAM76AQ8TAV0 307 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 GIPC2Q8TF65 315 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 TMEM175Q9BSA9 504 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 TXLNGYQ9BZA5 131 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 FAM129AQ9BZQ8 928 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 TSPYL1Q9H0U9 437 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 NMUR1Q9HB89 426 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 SAYSD1Q9NPB0 183 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 ARHGEF4Q9NR80 690 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 RRN3Q9NYV6 651 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 FBXW11Q9UKB1 542 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 MTMR11A4FU01 709 aa7.31□□□□□ -1.24
SMG1-215ENST00000568239 ZBBXA8MT70 800 aa7.31□□□□□ -1.24
SMG1-215ENST00000568239 F5H423 210 aaPredicted RBP7.31□□□□□ -1.24
SMG1-215ENST00000568239 H0YGN5 161 aa7.31□□□□□ -1.24
SMG1-215ENST00000568239 H7C4K7 107 aa7.31□□□□□ -1.24
SMG1-215ENST00000568239 I6L893 689 aaPredicted RBP7.31□□□□□ -1.24
SMG1-215ENST00000568239 TNFRSF10BO14763 440 aa7.31□□□□□ -1.24
SMG1-215ENST00000568239 RIPK2O43353 540 aa7.31□□□□□ -1.24
SMG1-215ENST00000568239 EPHB2P29323 1055 aa7.31□□□□□ -1.24
SMG1-215ENST00000568239 OR1D2P34982 312 aa7.31□□□□□ -1.24
SMG1-215ENST00000568239 C1QTNF8P60827 252 aa7.31□□□□□ -1.24
SMG1-215ENST00000568239 USP46P62068 366 aa7.31□□□□□ -1.24
SMG1-215ENST00000568239 BTG3Q14201 252 aaPredicted RBP7.31□□□□□ -1.24
SMG1-215ENST00000568239 C1orf53Q5VUE5 145 aa7.31□□□□□ -1.24
SMG1-215ENST00000568239 ANKRD22Q5VYY1 191 aa7.31□□□□□ -1.24
SMG1-215ENST00000568239 HEATR6Q6AI08 1181 aaKnown RBP7.31□□□□□ -1.24
SMG1-215ENST00000568239 RWDD4Q6NW29 188 aaKnown RBP7.31□□□□□ -1.24
SMG1-215ENST00000568239 RFX8Q6ZV50 586 aa7.31□□□□□ -1.24
SMG1-215ENST00000568239 CCDC110Q8TBZ0 833 aa7.31□□□□□ -1.24
SMG1-215ENST00000568239 FBXO32Q969P5 355 aa7.31□□□□□ -1.24
SMG1-215ENST00000568239 FAF2Q96CS3 445 aa7.31□□□□□ -1.24
SMG1-215ENST00000568239 TMEM169Q96HH4 297 aa7.31□□□□□ -1.24
SMG1-215ENST00000568239 LGMNQ99538 433 aa7.31□□□□□ -1.24
SMG1-215ENST00000568239 SH3GL2Q99962 352 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms