RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 SCAMP3O14828 347 aaKnown RBP8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 ADAM23O75077 832 aa8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 IRF1P10914 325 aa8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 CYP11B1P15538 503 aa8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 TGM1P22735 817 aa8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 HOXC13P31276 330 aa8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 SCNN1AP37088 669 aa8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 YWHAZP63104 245 aaKnown RBP8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 IQCB1Q15051 598 aa8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 CRY1Q16526 586 aa8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 SYPL2Q5VXT5 272 aa8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 NUDT18Q6ZVK8 323 aa8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 RSRC2Q7L4I2 434 aaKnown RBP8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 ARCQ7LC44 396 aa8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 ZNF677Q86XU0 584 aa8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 MIB1Q86YT6 1006 aa8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 ZDHHC17Q8IUH5 632 aa8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 DENND1CQ8IV53 801 aa8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 UNC45BQ8IWX7 931 aa8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 DHX40Q8IX18 779 aaKnown RBP8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 TERB1Q8NA31 727 aa8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 IL17RCQ8NAC3 791 aa8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 RNF139Q8WU17 664 aa8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 EDEM1Q92611 657 aa8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 NT5C3BQ969T7 300 aa8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 ZC3H10Q96K80 434 aaKnown RBP8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 LMLNQ96KR4 655 aa8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 FCRL2Q96LA5 508 aaPredicted RBP8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 SLC2A13Q96QE2 648 aa8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 XPO6Q96QU8 1125 aaKnown RBP8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 CPXM1Q96SM3 734 aa8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 TRIM62Q9BVG3 475 aa8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 BBS2Q9BXC9 721 aa8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 VPS16Q9H269 839 aa8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 POPDC2Q9HBU9 364 aa8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 ARHGEF4Q9NR80 690 aa8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 TMEM51Q9NW97 253 aa8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 TAB2Q9NYJ8 693 aa8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 RASAL2Q9UJF2 1139 aa8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 TLR6Q9Y2C9 796 aa8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 GON4LQ3T8J9 2241 aa8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 KCNU1A8MYU2 1149 aa8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 PRRT4C9JH25 899 aa8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 NPC1O15118 1278 aa8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 TRIM24O15164 1050 aa8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 EPHB6O15197 1021 aa8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 IRAK2O43187 625 aa8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 CYP1A1P04798 512 aaPredicted RBP8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 NCAM1P13591 858 aa8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 FNTBP49356 437 aa8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 HARS2P49590 506 aaKnown RBP8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 DGKEP52429 567 aa8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 SNX16P57768 344 aa8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 DMC1Q14565 340 aa8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 ANO4Q32M45 955 aa8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 PTPN20Q4JDL3 420 aa8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 MPPE1Q53F39 396 aa8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 FAM133BQ5BKY9 247 aaKnown RBP8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 EFHC1Q5JVL4 640 aa8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 EMC10Q5UCC4 262 aa8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 PIK3R6Q5UE93 754 aa8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 NUGGCQ68CJ6 796 aa8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 OLFML1Q6UWY5 402 aa8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 TMEM92Q6UXU6 159 aa8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 TPGS1Q6ZTW0 290 aa8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 SLC26A9Q7LBE3 791 aa8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 BNIPLQ7Z465 357 aa8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 NAT16Q8N8M0 369 aa8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 C1orf131Q8NDD1 294 aaKnown RBP8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 TTC16Q8NEE8 873 aa8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 OLIG1Q8TAK6 271 aa8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 EPS8L1Q8TE68 723 aa8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 DQX1Q8TE96 717 aaKnown RBP8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 GAB3Q8WWW8 586 aa8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 LOXL4Q96JB6 756 aa8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 PPP1R13BQ96KQ4 1090 aa8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 GABRG3Q99928 467 aa8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 LSM14BQ9BX40 385 aaKnown RBP8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 MIS12Q9H081 205 aa8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 NAT10Q9H0A0 1025 aaKnown RBP8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 TJP2Q9UDY2 1190 aa8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 NOCTQ9UK39 431 aaKnown RBP8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 SLC8A2Q9UPR5 921 aa8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 NAALADL1Q9UQQ1 740 aa8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 DCHS1Q96JQ0 3298 aa8.53□□□□□ -1.04
HDGFL3-205ENST00000568129 NYNRINQ9P2P1 1898 aaKnown RBP8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 TBC1D3BA6NDS4 549 aa8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 SMTNL1A8MU46 457 aa8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 NEDD8-MDP1E9PL57 170 aa8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 SGK1O00141 431 aa8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 PIK3R2O00459 728 aa8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 MSI1O43347 362 aaKnown RBP8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 TIMM44O43615 452 aa8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 ACSL4O60488 711 aa8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 HSF2BPO75031 334 aa8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 LRP3O75074 770 aa8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 APBB3O95704 486 aa8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 LSM8O95777 96 aaKnown RBP8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 ERBB2P04626 1255 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms