RNA–Protein interactions for RNA: ENST00000567988.5

FANCA-229, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 915 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-229ENST00000567988 USP33Q8TEY7 942 aa12.82□□□□□ -0.36
FANCA-229ENST00000567988 NT5C3BQ969T7 300 aa12.82□□□□□ -0.36
FANCA-229ENST00000567988 PCDHB18PQ96TA0 734 aa12.82□□□□□ -0.36
FANCA-229ENST00000567988 POPDC2Q9HBU9 364 aa12.82□□□□□ -0.36
FANCA-229ENST00000567988 CD248Q9HCU0 757 aa12.82□□□□□ -0.36
FANCA-229ENST00000567988 NLRC4Q9NPP4 1024 aa12.82□□□□□ -0.36
FANCA-229ENST00000567988 ST7Q9NRC1 585 aa12.82□□□□□ -0.36
FANCA-229ENST00000567988 SPATA6Q9NWH7 488 aaPredicted RBP12.82□□□□□ -0.36
FANCA-229ENST00000567988 LSM7Q9UK45 103 aaKnown RBP12.82□□□□□ -0.36
FANCA-229ENST00000567988 STRIP2Q9ULQ0 834 aa12.82□□□□□ -0.36
FANCA-229ENST00000567988 MYO6Q9UM54 1294 aa12.82□□□□□ -0.36
FANCA-229ENST00000567988 MYOFQ9NZM1 2061 aa12.82□□□□□ -0.36
FANCA-229ENST00000567988 RIF1Q5UIP0 2472 aaKnown RBP12.81□□□□□ -0.36
FANCA-229ENST00000567988 IRAK2O43187 625 aa12.81□□□□□ -0.36
FANCA-229ENST00000567988 LAMTOR5O43504 91 aa12.81□□□□□ -0.36
FANCA-229ENST00000567988 GFPT2O94808 682 aa12.81□□□□□ -0.36
FANCA-229ENST00000567988 KAT7O95251 611 aa12.81□□□□□ -0.36
FANCA-229ENST00000567988 UNGP13051 313 aaPredicted RBP12.81□□□□□ -0.36
FANCA-229ENST00000567988 HOXD11P31277 338 aaPredicted RBP12.81□□□□□ -0.36
FANCA-229ENST00000567988 KRT9P35527 623 aa12.81□□□□□ -0.36
FANCA-229ENST00000567988 GRIA2P42262 883 aa12.81□□□□□ -0.36
FANCA-229ENST00000567988 CCR3P51677 355 aa12.81□□□□□ -0.36
FANCA-229ENST00000567988 YWHAZP63104 245 aaKnown RBP12.81□□□□□ -0.36
FANCA-229ENST00000567988 NFKBIBQ15653 356 aa12.81□□□□□ -0.36
FANCA-229ENST00000567988 FIGNQ5HY92 759 aa12.81□□□□□ -0.36
FANCA-229ENST00000567988 E4F1Q66K89 784 aaPredicted RBP12.81□□□□□ -0.36
FANCA-229ENST00000567988 NADSYN1Q6IA69 706 aa12.81□□□□□ -0.36
FANCA-229ENST00000567988 IRF2BP2Q7Z5L9 587 aa12.81□□□□□ -0.36
FANCA-229ENST00000567988 XYLT1Q86Y38 959 aa12.81□□□□□ -0.36
FANCA-229ENST00000567988 DENND1CQ8IV53 801 aa12.81□□□□□ -0.36
FANCA-229ENST00000567988 TERB1Q8NA31 727 aa12.81□□□□□ -0.36
FANCA-229ENST00000567988 TMEM35BQ8NCS4 154 aa12.81□□□□□ -0.36
FANCA-229ENST00000567988 NEK11Q8NG66 645 aa12.81□□□□□ -0.36
FANCA-229ENST00000567988 RNF139Q8WU17 664 aa12.81□□□□□ -0.36
FANCA-229ENST00000567988 PNKPQ96T60 521 aa12.81□□□□□ -0.36
FANCA-229ENST00000567988 IRX2Q9BZI1 471 aaPredicted RBP12.81□□□□□ -0.36
FANCA-229ENST00000567988 FAM86C1Q9NVL1 165 aa12.81□□□□□ -0.36
FANCA-229ENST00000567988 CALCOCO1Q9P1Z2 691 aa12.81□□□□□ -0.36
FANCA-229ENST00000567988 CLEC4EQ9ULY5 219 aa12.81□□□□□ -0.36
FANCA-229ENST00000567988 TLR6Q9Y2C9 796 aa12.81□□□□□ -0.36
FANCA-229ENST00000567988 SLC27A6Q9Y2P4 619 aa12.81□□□□□ -0.36
FANCA-229ENST00000567988 STARD13Q9Y3M8 1113 aa12.81□□□□□ -0.36
FANCA-229ENST00000567988 DMXL1Q9Y485 3027 aa12.81□□□□□ -0.36
FANCA-229ENST00000567988 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.8□□□□□ -0.36
FANCA-229ENST00000567988 HSF2BPO75031 334 aa12.8□□□□□ -0.36
FANCA-229ENST00000567988 DAB1O75553 588 aa12.8□□□□□ -0.36
FANCA-229ENST00000567988 HMBSP08397 361 aa12.8□□□□□ -0.36
FANCA-229ENST00000567988 NCAM1P13591 858 aa12.8□□□□□ -0.36
FANCA-229ENST00000567988 TYRP14679 529 aa12.8□□□□□ -0.36
FANCA-229ENST00000567988 MMP8P22894 467 aa12.8□□□□□ -0.36
FANCA-229ENST00000567988 CHKAP35790 457 aa12.8□□□□□ -0.36
FANCA-229ENST00000567988 STAT1P42224 750 aa12.8□□□□□ -0.36
FANCA-229ENST00000567988 GSCP56915 257 aaPredicted RBP12.8□□□□□ -0.36
FANCA-229ENST00000567988 SLC6A3Q01959 620 aa12.8□□□□□ -0.36
FANCA-229ENST00000567988 TAF3Q5VWG9 929 aa12.8□□□□□ -0.36
FANCA-229ENST00000567988 TRNP1Q6NT89 227 aa12.8□□□□□ -0.36
FANCA-229ENST00000567988 TSSK4Q6SA08 328 aa12.8□□□□□ -0.36
FANCA-229ENST00000567988 ARCQ7LC44 396 aa12.8□□□□□ -0.36
FANCA-229ENST00000567988 ZDHHC17Q8IUH5 632 aa12.8□□□□□ -0.36
FANCA-229ENST00000567988 MYEOVQ96EZ4 313 aa12.8□□□□□ -0.36
FANCA-229ENST00000567988 LMLNQ96KR4 655 aa12.8□□□□□ -0.36
FANCA-229ENST00000567988 SERPINB11Q96P15 392 aa12.8□□□□□ -0.36
FANCA-229ENST00000567988 TRIM62Q9BVG3 475 aa12.8□□□□□ -0.36
FANCA-229ENST00000567988 FAM126AQ9BYI3 521 aaPredicted RBP12.8□□□□□ -0.36
FANCA-229ENST00000567988 POLR3BQ9NW08 1133 aaPredicted RBP12.8□□□□□ -0.36
FANCA-229ENST00000567988 WDR35Q9P2L0 1181 aa12.8□□□□□ -0.36
FANCA-229ENST00000567988 TMEM59LQ9UK28 342 aa12.8□□□□□ -0.36
FANCA-229ENST00000567988 TCRBV5S1A1TA0A578 114 aa12.79□□□□□ -0.36
FANCA-229ENST00000567988 KCNU1A8MYU2 1149 aa12.79□□□□□ -0.36
FANCA-229ENST00000567988 PRRT4C9JH25 899 aa12.79□□□□□ -0.36
FANCA-229ENST00000567988 NEDD8-MDP1E9PL57 170 aa12.79□□□□□ -0.36
FANCA-229ENST00000567988 I6L893 689 aaPredicted RBP12.79□□□□□ -0.36
FANCA-229ENST00000567988 TRUB2O95900 331 aaKnown RBP12.79□□□□□ -0.36
FANCA-229ENST00000567988 HNRNPLP14866 589 aaKnown RBP eCLIP12.79□□□□□ -0.36
FANCA-229ENST00000567988 HOXD9P28356 352 aaPredicted RBP12.79□□□□□ -0.36
FANCA-229ENST00000567988 SLC6A4P31645 630 aa12.79□□□□□ -0.36
FANCA-229ENST00000567988 TNFRSF4P43489 277 aa12.79□□□□□ -0.36
FANCA-229ENST00000567988 CXCL12P48061 93 aa12.79□□□□□ -0.36
FANCA-229ENST00000567988 SGSHP51688 502 aa12.79□□□□□ -0.36
FANCA-229ENST00000567988 FANCCQ00597 558 aa12.79□□□□□ -0.36
FANCA-229ENST00000567988 CENPCQ03188 943 aa12.79□□□□□ -0.36
FANCA-229ENST00000567988 CSTF1Q05048 431 aaKnown RBP12.79□□□□□ -0.36
FANCA-229ENST00000567988 DMWDQ09019 674 aa12.79□□□□□ -0.36
FANCA-229ENST00000567988 EFHC1Q5JVL4 640 aa12.79□□□□□ -0.36
FANCA-229ENST00000567988 ADGRF1Q5T601 910 aa12.79□□□□□ -0.36
FANCA-229ENST00000567988 NUGGCQ68CJ6 796 aa12.79□□□□□ -0.36
FANCA-229ENST00000567988 TPGS1Q6ZTW0 290 aa12.79□□□□□ -0.36
FANCA-229ENST00000567988 TOGARAM2Q6ZUX3 1019 aa12.79□□□□□ -0.36
FANCA-229ENST00000567988 SYT13Q7L8C5 426 aa12.79□□□□□ -0.36
FANCA-229ENST00000567988 KIAA0907Q7Z7F0 614 aaPredicted RBP12.79□□□□□ -0.36
FANCA-229ENST00000567988 DEFB106AQ8N104 65 aa12.79□□□□□ -0.36
FANCA-229ENST00000567988 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.79□□□□□ -0.36
FANCA-229ENST00000567988 IL17RCQ8NAC3 791 aa12.79□□□□□ -0.36
FANCA-229ENST00000567988 ADAM32Q8TC27 787 aa12.79□□□□□ -0.36
FANCA-229ENST00000567988 ATOH1Q92858 354 aaPredicted RBP12.79□□□□□ -0.36
FANCA-229ENST00000567988 EXOC4Q96A65 974 aa12.79□□□□□ -0.36
FANCA-229ENST00000567988 FAM149B1Q96BN6 582 aa12.79□□□□□ -0.36
FANCA-229ENST00000567988 FAM122AQ96E09 287 aa12.79□□□□□ -0.36
FANCA-229ENST00000567988 PGAP3Q96FM1 320 aaPredicted RBP12.79□□□□□ -0.36
FANCA-229ENST00000567988 PRICKLE1Q96MT3 831 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms