RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 TFAP2BQ92481 460 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 WNT2BQ93097 391 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 PLD4Q96BZ4 506 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 SPACA7Q96KW9 195 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 HSFY1Q96LI6 401 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 FAM81BQ96LP2 452 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 SLC4A5Q9BY07 1137 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 INTS2Q9H0H0 1204 aaKnown RBP5.01□□□□□ -1.61
CLK3-219ENST00000567805 DUSP15Q9H1R2 295 aaPredicted RBP5.01□□□□□ -1.61
CLK3-219ENST00000567805 ARRDC1-AS1Q9H2J1 176 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 ABCC13Q9NSE7 274 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 FBXO10Q9UK96 956 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 AGO1Q9UL18 857 aaKnown RBP5.01□□□□□ -1.61
CLK3-219ENST00000567805 CNTN6Q9UQ52 1028 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 PCDHGA5Q9Y5G8 931 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.01□□□□□ -1.61
CLK3-219ENST00000567805 MUC22E2RYF6 1773 aaPredicted RBP5.01□□□□□ -1.61
CLK3-219ENST00000567805 ABCA7Q8IZY2 2146 aa5□□□□□ -1.61
CLK3-219ENST00000567805 GTPBP10A4D1E9 387 aaKnown RBP5□□□□□ -1.61
CLK3-219ENST00000567805 YJEFN3A6XGL0 299 aa5□□□□□ -1.61
CLK3-219ENST00000567805 E7ENQ6 273 aa5□□□□□ -1.61
CLK3-219ENST00000567805 RNF225M0QZC1 329 aaPredicted RBP5□□□□□ -1.61
CLK3-219ENST00000567805 GFRA2O00451 464 aa5□□□□□ -1.61
CLK3-219ENST00000567805 DCLK1O15075 740 aa5□□□□□ -1.61
CLK3-219ENST00000567805 NPC1O15118 1278 aa5□□□□□ -1.61
CLK3-219ENST00000567805 TRIM24O15164 1050 aa5□□□□□ -1.61
CLK3-219ENST00000567805 MED7O43513 233 aa5□□□□□ -1.61
CLK3-219ENST00000567805 FBXO21O94952 628 aa5□□□□□ -1.61
CLK3-219ENST00000567805 LATS1O95835 1130 aa5□□□□□ -1.61
CLK3-219ENST00000567805 PENKP01210 267 aaPredicted RBP5□□□□□ -1.61
CLK3-219ENST00000567805 LTFP02788 710 aa5□□□□□ -1.61
CLK3-219ENST00000567805 CYBBP04839 570 aa5□□□□□ -1.61
CLK3-219ENST00000567805 HMBSP08397 361 aa5□□□□□ -1.61
CLK3-219ENST00000567805 CISD3P0C7P0 127 aa5□□□□□ -1.61
CLK3-219ENST00000567805 ZNF806P0C7X5 589 aa5□□□□□ -1.61
CLK3-219ENST00000567805 KRT5P13647 590 aa5□□□□□ -1.61
CLK3-219ENST00000567805 LCP1P13796 627 aa5□□□□□ -1.61
CLK3-219ENST00000567805 HOXB2P14652 356 aa5□□□□□ -1.61
CLK3-219ENST00000567805 HNRNPLP14866 589 aaKnown RBP eCLIP5□□□□□ -1.61
CLK3-219ENST00000567805 FECHP22830 423 aa5□□□□□ -1.61
CLK3-219ENST00000567805 BRD2P25440 801 aaKnown RBP5□□□□□ -1.61
CLK3-219ENST00000567805 NTSR1P30989 418 aa5□□□□□ -1.61
CLK3-219ENST00000567805 GBP1P32455 592 aa5□□□□□ -1.61
CLK3-219ENST00000567805 ANP32AP39687 249 aaKnown RBP5□□□□□ -1.61
CLK3-219ENST00000567805 MPLP40238 635 aa5□□□□□ -1.61
CLK3-219ENST00000567805 HARS2P49590 506 aaKnown RBP5□□□□□ -1.61
CLK3-219ENST00000567805 ATXN1P54253 815 aaKnown RBP5□□□□□ -1.61
CLK3-219ENST00000567805 MFAP3P55082 362 aa5□□□□□ -1.61
CLK3-219ENST00000567805 DAOAP59103 153 aa5□□□□□ -1.61
CLK3-219ENST00000567805 ZNF445P59923 1031 aa5□□□□□ -1.61
CLK3-219ENST00000567805 BYSLQ13895 437 aaKnown RBP5□□□□□ -1.61
CLK3-219ENST00000567805 E2F5Q15329 346 aa5□□□□□ -1.61
CLK3-219ENST00000567805 TRIP4Q15650 581 aaPredicted RBP5□□□□□ -1.61
CLK3-219ENST00000567805 MEA1Q16626 185 aa5□□□□□ -1.61
CLK3-219ENST00000567805 TPD52L1Q16890 204 aaPredicted RBP5□□□□□ -1.61
CLK3-219ENST00000567805 EXOC3L4Q17RC7 722 aa5□□□□□ -1.61
CLK3-219ENST00000567805 AASDHQ4L235 1098 aaPredicted RBP5□□□□□ -1.61
CLK3-219ENST00000567805 SPDYCQ5MJ68 293 aa5□□□□□ -1.61
CLK3-219ENST00000567805 PLA2G2CQ5R387 149 aa5□□□□□ -1.61
CLK3-219ENST00000567805 EMC10Q5UCC4 262 aa5□□□□□ -1.61
CLK3-219ENST00000567805 FYB2Q5VWT5 728 aa5□□□□□ -1.61
CLK3-219ENST00000567805 BSPRYQ5W0U4 402 aa5□□□□□ -1.61
CLK3-219ENST00000567805 PMS2CLQ68D20 193 aa5□□□□□ -1.61
CLK3-219ENST00000567805 SDE2Q6IQ49 451 aa5□□□□□ -1.61
CLK3-219ENST00000567805 PMF1Q6P1K2 205 aa5□□□□□ -1.61
CLK3-219ENST00000567805 MSANTD2Q6P1R3 559 aa5□□□□□ -1.61
CLK3-219ENST00000567805 TRIM65Q6PJ69 517 aa5□□□□□ -1.61
CLK3-219ENST00000567805 GBP6Q6ZN66 633 aa5□□□□□ -1.61
CLK3-219ENST00000567805 TOGARAM2Q6ZUX3 1019 aa5□□□□□ -1.61
CLK3-219ENST00000567805 DENND1CQ8IV53 801 aa5□□□□□ -1.61
CLK3-219ENST00000567805 FMNL3Q8IVF7 1028 aa5□□□□□ -1.61
CLK3-219ENST00000567805 ARHGEF19Q8IW93 802 aa5□□□□□ -1.61
CLK3-219ENST00000567805 CHPFQ8IZ52 775 aa5□□□□□ -1.61
CLK3-219ENST00000567805 C12orf50Q8NA57 414 aaPredicted RBP5□□□□□ -1.61
CLK3-219ENST00000567805 OLIG1Q8TAK6 271 aa5□□□□□ -1.61
CLK3-219ENST00000567805 HMGB4Q8WW32 186 aa5□□□□□ -1.61
CLK3-219ENST00000567805 IRGQQ8WZA9 623 aa5□□□□□ -1.61
CLK3-219ENST00000567805 NDRG1Q92597 394 aaKnown RBP5□□□□□ -1.61
CLK3-219ENST00000567805 GOLGA1Q92805 767 aa5□□□□□ -1.61
CLK3-219ENST00000567805 KAT5Q92993 513 aa5□□□□□ -1.61
CLK3-219ENST00000567805 BHMTQ93088 406 aa5□□□□□ -1.61
CLK3-219ENST00000567805 KREMEN1Q96MU8 473 aa5□□□□□ -1.61
CLK3-219ENST00000567805 GABRG3Q99928 467 aa5□□□□□ -1.61
CLK3-219ENST00000567805 ZSWIM1Q9BR11 485 aa5□□□□□ -1.61
CLK3-219ENST00000567805 RTKNQ9BST9 563 aa5□□□□□ -1.61
CLK3-219ENST00000567805 TRIM62Q9BVG3 475 aa5□□□□□ -1.61
CLK3-219ENST00000567805 SLC2A11Q9BYW1 496 aa5□□□□□ -1.61
CLK3-219ENST00000567805 TPSD1Q9BZJ3 242 aa5□□□□□ -1.61
CLK3-219ENST00000567805 CLSTN2Q9H4D0 955 aa5□□□□□ -1.61
CLK3-219ENST00000567805 UBE2TQ9NPD8 197 aaPredicted RBP5□□□□□ -1.61
CLK3-219ENST00000567805 ZDHHC4Q9NPG8 344 aa5□□□□□ -1.61
CLK3-219ENST00000567805 BCCIPQ9P287 314 aaKnown RBP eCLIP5□□□□□ -1.61
CLK3-219ENST00000567805 APEX2Q9UBZ4 518 aa5□□□□□ -1.61
CLK3-219ENST00000567805 SFMBT1Q9UHJ3 866 aa5□□□□□ -1.61
CLK3-219ENST00000567805 DACH1Q9UI36 760 aa5□□□□□ -1.61
CLK3-219ENST00000567805 SLC27A6Q9Y2P4 619 aa5□□□□□ -1.61
CLK3-219ENST00000567805 HBS1LQ9Y450 684 aaKnown RBP5□□□□□ -1.61
CLK3-219ENST00000567805 ADAMTS9Q9P2N4 1935 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 CACNA1AO00555 2505 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 ASPMQ8IZT6 3477 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms