RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 COX4I1P13073 169 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 RAD23AP54725 363 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 ARMC4Q5T2S8 1044 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 COLGALT1Q8NBJ5 622 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 RDM1Q8NG50 284 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 FNIP1Q8TF40 1166 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 SEPT8Q92599 483 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 CCDC126Q96EE4 140 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 TRIM54Q9BYV2 358 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 C17orf75Q9HAS0 396 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 EVPLLA8MZ36 301 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 HSMCR30P0CW71 290 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 GARTP22102 1010 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 SOX6P35712 828 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 SLC12A3P55017 1021 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 DLG4P78352 724 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 SLC1A5Q15758 541 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 CCDC153Q494R4 210 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 ARMCX4Q5H9R4 360 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 ATF7IP2Q5U623 682 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 FAM136AQ96C01 138 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 ZNF560Q96MR9 790 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 BDH2Q9BUT1 245 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 MAN1C1Q9NR34 630 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 PRR23D1E9PI22 279 aaPredicted RBP12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 FSCN2O14926 492 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 MTSS1O43312 755 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 PRR23D2P0DMB1 279 aaPredicted RBP12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 ALOX12P18054 663 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 CDH3P22223 829 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 MYL6P60660 151 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 POU4F1Q01851 419 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 GPR107Q5VW38 600 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 ABI1Q8IZP0 508 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 LRRC71Q8N4P6 559 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 NAT14Q8WUY8 206 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 RORBQ92753 470 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 PHF21BQ96EK2 531 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 RNF145Q96MT1 663 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 KCTD14Q9BQ13 255 aaPredicted RBP12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 C9orf16Q9BUW7 83 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 MECRQ9BV79 373 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 FHDC1Q9C0D6 1143 aaPredicted RBP12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 TRIM24O15164 1050 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 CLASP2O75122 1294 aaKnown RBP12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 CDK7P50613 346 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 RAB14P61106 215 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 EFL1Q7Z2Z2 1120 aaKnown RBP12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 RBM15BQ8NDT2 890 aaKnown RBP12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 ARHGEF3Q9NR81 526 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 DOLKQ9UPQ8 538 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 DMTF1Q9Y222 760 aa12.73□□□□□ -0.37
CSPG4P13-202ENST00000567704 C5orf60A6NFR6 353 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 KCNQ2O43526 872 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 LIASO43766 372 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 DDHD2O94830 711 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 PIGNO95427 931 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 PAEPP09466 180 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 TTKP33981 857 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 CSTF3Q12996 717 aaKnown RBP12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 MAPRE1Q15691 268 aaKnown RBP12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 ATP6AP1LQ52LC2 224 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 SAMD4BQ5PRF9 694 aaKnown RBP12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 MIER2Q8N344 545 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 NSMCE2Q96MF7 247 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 RPAP3Q9H6T3 665 aaPredicted RBP12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 LATS2Q9NRM7 1088 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 EURLQ9NYK6 297 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 SELENONQ9NZV5 590 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 A0A0B4J269 797 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 LSM8O95777 96 aaKnown RBP12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 GLRA2P23416 452 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 MGAT1P26572 445 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 MSX2P35548 267 aaPredicted RBP12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 PTAR1Q7Z6K3 402 aaPredicted RBP12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 TRIM69Q86WT6 500 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 ERO1BQ86YB8 467 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 FLAD1Q8NFF5 587 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 VCPIP1Q96JH7 1222 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 UBP1Q9NZI7 540 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 SLC12A4Q9UP95 1085 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 RHOBTB1O94844 696 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 SLITRK3O94933 977 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 SERPINA6P08185 405 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 GCNT1Q02742 428 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 NFIL3Q16649 462 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 AMIGO2Q86SJ2 522 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 LINC00523Q86TU6 105 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 FAM131BQ86XD5 332 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 CAMK1DQ8IU85 385 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 THEM5Q8N1Q8 247 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 RBM46Q8TBY0 533 aaKnown RBP12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 OSCP1Q8WVF1 389 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 MARK4Q96L34 752 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 PTPRHQ9HD43 1115 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 FBXO28Q9NVF7 368 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 USP32Q8NFA0 1604 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 MAP3K13O43283 966 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 TAL1P17542 331 aaPredicted RBP12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 VCLP18206 1134 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms