RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 RAB27BO00194 218 aa2.76□□□□□ -1.97
SMG1-212ENST00000566328 GRID2O43424 1007 aa2.76□□□□□ -1.97
SMG1-212ENST00000566328 ACAA1P09110 424 aaPredicted RBP2.76□□□□□ -1.97
SMG1-212ENST00000566328 HSPA6P17066 643 aa2.76□□□□□ -1.97
SMG1-212ENST00000566328 ACVR2AP27037 513 aa2.76□□□□□ -1.97
SMG1-212ENST00000566328 DUSP1P28562 367 aa2.76□□□□□ -1.97
SMG1-212ENST00000566328 RFX2P48378 723 aa2.76□□□□□ -1.97
SMG1-212ENST00000566328 VPS41P49754 854 aa2.76□□□□□ -1.97
SMG1-212ENST00000566328 DGKQP52824 942 aa2.76□□□□□ -1.97
SMG1-212ENST00000566328 AMPD3Q01432 767 aa2.76□□□□□ -1.97
SMG1-212ENST00000566328 ZNF267Q14586 743 aaPredicted RBP2.76□□□□□ -1.97
SMG1-212ENST00000566328 GLE1Q53GS7 698 aaKnown RBP2.76□□□□□ -1.97
SMG1-212ENST00000566328 PIK3CD-AS1Q5SR53 167 aa2.76□□□□□ -1.97
SMG1-212ENST00000566328 ISM2Q6H9L7 571 aa2.76□□□□□ -1.97
SMG1-212ENST00000566328 FSTL5Q8N475 847 aaPredicted RBP2.76□□□□□ -1.97
SMG1-212ENST00000566328 IL31RAQ8NI17 732 aa2.76□□□□□ -1.97
SMG1-212ENST00000566328 WFIKKN2Q8TEU8 576 aa2.76□□□□□ -1.97
SMG1-212ENST00000566328 TRIM43Q96BQ3 446 aaPredicted RBP2.76□□□□□ -1.97
SMG1-212ENST00000566328 PHF21BQ96EK2 531 aa2.76□□□□□ -1.97
SMG1-212ENST00000566328 NT5C1BQ96P26 610 aa2.76□□□□□ -1.97
SMG1-212ENST00000566328 SLITRK1Q96PX8 696 aa2.76□□□□□ -1.97
SMG1-212ENST00000566328 WDR83Q9BRX9 315 aaKnown RBP2.76□□□□□ -1.97
SMG1-212ENST00000566328 TM6SF1Q9BZW5 370 aa2.76□□□□□ -1.97
SMG1-212ENST00000566328 CDT1Q9H211 546 aa2.76□□□□□ -1.97
SMG1-212ENST00000566328 SLC12A5Q9H2X9 1139 aa2.76□□□□□ -1.97
SMG1-212ENST00000566328 RMI1Q9H9A7 625 aa2.76□□□□□ -1.97
SMG1-212ENST00000566328 NMRK2Q9NPI5 230 aa2.76□□□□□ -1.97
SMG1-212ENST00000566328 PLSCR4Q9NRQ2 329 aa2.76□□□□□ -1.97
SMG1-212ENST00000566328 VPS45Q9NRW7 570 aa2.76□□□□□ -1.97
SMG1-212ENST00000566328 SACM1LQ9NTJ5 587 aa2.76□□□□□ -1.97
SMG1-212ENST00000566328 IP6K2Q9UHH9 426 aa2.76□□□□□ -1.97
SMG1-212ENST00000566328 MYO6Q9UM54 1294 aa2.76□□□□□ -1.97
SMG1-212ENST00000566328 TRIP12Q14669 1992 aaPredicted RBP2.76□□□□□ -1.97
SMG1-212ENST00000566328 SPATA31A5Q5VU36 1347 aa2.75□□□□□ -1.97
SMG1-212ENST00000566328 SPATA31A7Q8IWB4 1347 aa2.75□□□□□ -1.97
SMG1-212ENST00000566328 DENND3A2RUS2 1198 aa2.75□□□□□ -1.97
SMG1-212ENST00000566328 DPPA5A6NC42 116 aa2.75□□□□□ -1.97
SMG1-212ENST00000566328 ISM1B1AKI9 464 aa2.75□□□□□ -1.97
SMG1-212ENST00000566328 FAM227AF5H4B4 570 aa2.75□□□□□ -1.97
SMG1-212ENST00000566328 TBX3O15119 743 aa2.75□□□□□ -1.97
SMG1-212ENST00000566328 ZNF432O94892 652 aa2.75□□□□□ -1.97
SMG1-212ENST00000566328 HOXA11P31270 313 aaPredicted RBP2.75□□□□□ -1.97
SMG1-212ENST00000566328 HOXD12P35452 270 aa2.75□□□□□ -1.97
SMG1-212ENST00000566328 IDUAP35475 653 aa2.75□□□□□ -1.97
SMG1-212ENST00000566328 AGFG1P52594 562 aaKnown RBP2.75□□□□□ -1.97
SMG1-212ENST00000566328 COPAP53621 1224 aa2.75□□□□□ -1.97
SMG1-212ENST00000566328 SMTNL2Q2TAL5 461 aa2.75□□□□□ -1.97
SMG1-212ENST00000566328 C6orf10Q5SRN2 563 aa2.75□□□□□ -1.97
SMG1-212ENST00000566328 NUGGCQ68CJ6 796 aa2.75□□□□□ -1.97
SMG1-212ENST00000566328 B3GNT9Q6UX72 402 aa2.75□□□□□ -1.97
SMG1-212ENST00000566328 RTL10Q7L3V2 364 aa2.75□□□□□ -1.97
SMG1-212ENST00000566328 RBM23Q86U06 439 aaKnown RBP2.75□□□□□ -1.97
SMG1-212ENST00000566328 TMEM174Q8WUU8 243 aa2.75□□□□□ -1.97
SMG1-212ENST00000566328 MAML1Q92585 1016 aa2.75□□□□□ -1.97
SMG1-212ENST00000566328 CELF1Q92879 486 aaKnown RBP2.75□□□□□ -1.97
SMG1-212ENST00000566328 NMD3Q96D46 503 aaKnown RBP2.75□□□□□ -1.97
SMG1-212ENST00000566328 ERVK-5Q9HDB9 667 aa2.75□□□□□ -1.97
SMG1-212ENST00000566328 AASDHPPTQ9NRN7 309 aa2.75□□□□□ -1.97
SMG1-212ENST00000566328 ASNSD1Q9NWL6 643 aa2.75□□□□□ -1.97
SMG1-212ENST00000566328 DKK4Q9UBT3 224 aa2.75□□□□□ -1.97
SMG1-212ENST00000566328 RGS17Q9UGC6 210 aaPredicted RBP2.75□□□□□ -1.97
SMG1-212ENST00000566328 AFF4Q9UHB7 1163 aaKnown RBP2.75□□□□□ -1.97
SMG1-212ENST00000566328 PNMA8BQ9ULN7 279 aaPredicted RBP2.75□□□□□ -1.97
SMG1-212ENST00000566328 COL15A1P39059 1388 aa2.74□□□□□ -1.97
SMG1-212ENST00000566328 EMSYQ7Z589 1322 aa2.74□□□□□ -1.97
SMG1-212ENST00000566328 C16orf96A6NNT2 1141 aa2.74□□□□□ -1.97
SMG1-212ENST00000566328 PODXLO00592 558 aa2.74□□□□□ -1.97
SMG1-212ENST00000566328 SGPL1O95470 568 aa2.74□□□□□ -1.97
SMG1-212ENST00000566328 MBPP02686 304 aaPredicted RBP2.74□□□□□ -1.97
SMG1-212ENST00000566328 ENO1P06733 434 aaKnown RBP2.74□□□□□ -1.97
SMG1-212ENST00000566328 PKMP14618 531 aaKnown RBP2.74□□□□□ -1.97
SMG1-212ENST00000566328 NTSR1P30989 418 aa2.74□□□□□ -1.97
SMG1-212ENST00000566328 ART1P52961 327 aa2.74□□□□□ -1.97
SMG1-212ENST00000566328 SUMO3P55854 103 aaPredicted RBP2.74□□□□□ -1.97
SMG1-212ENST00000566328 RAE1P78406 368 aaKnown RBP2.74□□□□□ -1.97
SMG1-212ENST00000566328 ROR2Q01974 943 aaKnown RBP2.74□□□□□ -1.97
SMG1-212ENST00000566328 GAD2Q05329 585 aa2.74□□□□□ -1.97
SMG1-212ENST00000566328 IZUMO4Q1ZYL8 232 aa2.74□□□□□ -1.97
SMG1-212ENST00000566328 GRHL2Q6ISB3 625 aa2.74□□□□□ -1.97
SMG1-212ENST00000566328 TRILQ7L0X0 811 aa2.74□□□□□ -1.97
SMG1-212ENST00000566328 MAEAQ7L5Y9 396 aa2.74□□□□□ -1.97
SMG1-212ENST00000566328 LMO3Q8TAP4 145 aa2.74□□□□□ -1.97
SMG1-212ENST00000566328 AKAP1Q92667 903 aaKnown RBP eCLIP2.74□□□□□ -1.97
SMG1-212ENST00000566328 AIFM3Q96NN9 605 aa2.74□□□□□ -1.97
SMG1-212ENST00000566328 TRIM2Q9C040 744 aa2.74□□□□□ -1.97
SMG1-212ENST00000566328 ABHD10Q9NUJ1 306 aa2.74□□□□□ -1.97
SMG1-212ENST00000566328 DDX56Q9NY93 547 aaKnown RBP2.74□□□□□ -1.97
SMG1-212ENST00000566328 PCDHGB1Q9Y5G3 927 aa2.74□□□□□ -1.97
SMG1-212ENST00000566328 OR6C75A6NL08 312 aa2.73□□□□□ -1.97
SMG1-212ENST00000566328 NTN3O00634 580 aaPredicted RBP2.73□□□□□ -1.97
SMG1-212ENST00000566328 WDR47O94967 919 aa2.73□□□□□ -1.97
SMG1-212ENST00000566328 MAP4K4O95819 1239 aaPredicted RBP2.73□□□□□ -1.97
SMG1-212ENST00000566328 CGAP01215 116 aa2.73□□□□□ -1.97
SMG1-212ENST00000566328 IFNA2P01563 188 aa2.73□□□□□ -1.97
SMG1-212ENST00000566328 TXNP10599 105 aaKnown RBP2.73□□□□□ -1.97
SMG1-212ENST00000566328 CHRNB1P11230 501 aa2.73□□□□□ -1.97
SMG1-212ENST00000566328 AKR1A1P14550 325 aa2.73□□□□□ -1.97
SMG1-212ENST00000566328 BRAFP15056 766 aa2.73□□□□□ -1.97
SMG1-212ENST00000566328 CPA1P15085 419 aa2.73□□□□□ -1.97
SMG1-212ENST00000566328 ZKSCAN1P17029 563 aaPredicted RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms