RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 PRO3102Q9H379 93 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 ANKZF1Q9H8Y5 726 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 VIPAS39Q9H9C1 493 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 CERS4Q9HA82 394 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 MARCH2Q9P0N8 246 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 LSM7Q9UK45 103 aaKnown RBP10.21□□□□□ -0.77
SF3B3-207ENST00000566095 NAALADL1Q9UQQ1 740 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 ZNF510Q9Y2H8 683 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 HCFC2Q9Y5Z7 792 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 PLXNA3P51805 1871 aa10.21□□□□□ -0.78
SF3B3-207ENST00000566095 PDE4DIPQ5VU43 2346 aa10.21□□□□□ -0.78
SF3B3-207ENST00000566095 TRAV19A0A0A6YYK7 116 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 ZNF840PA6NDX5 716 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 ZNF185O15231 689 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 CCL16O15467 120 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 IRAK2O43187 625 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 GABBR2O75899 941 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 ARHGEF15O94989 841 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 CSPG5O95196 566 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 GJB6O95452 261 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 LATS1O95835 1130 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 FGGP02679 453 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 HMGA1P17096 107 aaKnown RBP10.2□□□□□ -0.78
SF3B3-207ENST00000566095 IRS1P35568 1242 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 NRIP1P48552 1158 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 SLC11A2P49281 568 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 CXCR3P49682 368 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 DNA2P51530 1060 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 TBX4P57082 545 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 USP46P62068 366 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 OGDHQ02218 1023 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 SCAPQ12770 1279 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 KLF1Q13351 362 aaPredicted RBP10.2□□□□□ -0.78
SF3B3-207ENST00000566095 TAF5Q15542 800 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 TRIP4Q15650 581 aaPredicted RBP10.2□□□□□ -0.78
SF3B3-207ENST00000566095 CCNG2Q16589 344 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 C15orf59Q2T9L4 293 aaPredicted RBP10.2□□□□□ -0.78
SF3B3-207ENST00000566095 TFDP3Q5H9I0 405 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 PRPF38BQ5VTL8 546 aaKnown RBP10.2□□□□□ -0.78
SF3B3-207ENST00000566095 DCAF12L1Q5VU92 463 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 EMBQ6PCB8 327 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 TMCO3Q6UWJ1 677 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 LRRC31Q6UY01 552 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 BHLHA9Q7RTU4 235 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 SCD5Q86SK9 330 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 TAC4Q86UU9 113 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 EFHBQ8N7U6 833 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 GPR152Q8TDT2 470 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 GRK7Q8WTQ7 553 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 KHSRPQ92945 711 aaKnown RBP eCLIP10.2□□□□□ -0.783e-6■■■■□ 22.5
SF3B3-207ENST00000566095 PIWIL1Q96J94 861 aaKnown RBP10.2□□□□□ -0.78
SF3B3-207ENST00000566095 HAPLN3Q96S86 360 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 ZNF670Q9BS34 389 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 TRIM7Q9C029 511 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 ATXN3LQ9H3M9 355 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 RETREG1Q9H6L5 497 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 RASAL2Q9UJF2 1139 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 AP4E1Q9UPM8 1137 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 MYO16Q9Y6X6 1858 aa10.2□□□□□ -0.78
SF3B3-207ENST00000566095 SYNJ2BP-COX16A0A087WUM0 186 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 TYW5A2RUC4 315 aaKnown RBP10.19□□□□□ -0.78
SF3B3-207ENST00000566095 SMAPO00193 183 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 DAPK3O43293 454 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 PHF2O75151 1096 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 SPATA31D3P0C874 917 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 MBL2P11226 248 aaPredicted RBP10.19□□□□□ -0.78
SF3B3-207ENST00000566095 EPCAMP16422 314 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 GABRR2P28476 465 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 CXCR5P32302 372 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 AVPR1AP37288 418 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 CDR1P51861 262 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 EPHA5P54756 1037 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 CDH6P55285 790 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 HDAC4P56524 1084 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 SLC25A11Q02978 314 aaKnown RBP10.19□□□□□ -0.78
SF3B3-207ENST00000566095 ZNF252P-AS1Q0IIN9 211 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 EFEMP1Q12805 493 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 MTMR3Q13615 1198 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 CAMK1Q14012 370 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 DPYSL2Q16555 572 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 LONRF2Q1L5Z9 754 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 SYPL2Q5VXT5 272 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 CES5AQ6NT32 575 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 CCNI2Q6ZMN8 369 aaPredicted RBP10.19□□□□□ -0.78
SF3B3-207ENST00000566095 CEP128Q6ZU80 1094 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 SPATA31D4Q6ZUB0 917 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 HFE2Q6ZVN8 426 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 BNIPLQ7Z465 357 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 RBM23Q86U06 439 aaKnown RBP10.19□□□□□ -0.78
SF3B3-207ENST00000566095 FAM131BQ86XD5 332 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 NOA1Q8NC60 698 aaKnown RBP10.19□□□□□ -0.78
SF3B3-207ENST00000566095 SMG7Q92540 1137 aaKnown RBP10.19□□□□□ -0.78
SF3B3-207ENST00000566095 TSC1Q92574 1164 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 HSPH1Q92598 858 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 HAUS1Q96CS2 278 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 BTN2A3PQ96KV6 586 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 CAPZA3Q96KX2 299 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 CORO1BQ9BR76 489 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 CALN1Q9BXU9 219 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 FOXP3Q9BZS1 431 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms