RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 DNAJC24Q6P3W2 148 aa27.06■■□□□ 1.92
NME3-208ENST00000565379 ZNF852Q6ZMS4 543 aa27.06■■□□□ 1.92
NME3-208ENST00000565379 DDX42Q86XP3 938 aaKnown RBP eCLIP27.06■■□□□ 1.92
NME3-208ENST00000565379 KIAA1958Q8N8K9 716 aa27.06■■□□□ 1.92
NME3-208ENST00000565379 ARL14EPQ8N8R7 260 aaPredicted RBP27.06■■□□□ 1.92
NME3-208ENST00000565379 RIN3Q8TB24 985 aa27.06■■□□□ 1.92
NME3-208ENST00000565379 EIF3CQ99613 913 aaKnown RBP27.06■■□□□ 1.92
NME3-208ENST00000565379 MRPL47Q9HD33 250 aaKnown RBP27.06■■□□□ 1.92
NME3-208ENST00000565379 INTUQ9ULD6 942 aa27.06■■□□□ 1.92
NME3-208ENST00000565379 ARHGAP26Q9UNA1 814 aa27.06■■□□□ 1.92
NME3-208ENST00000565379 CCL26Q9Y258 94 aa27.06■■□□□ 1.92
NME3-208ENST00000565379 EPN1Q9Y6I3 576 aaPredicted RBP27.06■■□□□ 1.92
NME3-208ENST00000565379 DENND4CQ5VZ89 1909 aa27.06■■□□□ 1.92
NME3-208ENST00000565379 SIGLEC16A6NMB1 481 aa27.05■■□□□ 1.92
NME3-208ENST00000565379 GOLGA8SH3BPF8 625 aa27.05■■□□□ 1.92
NME3-208ENST00000565379 H2AFZP0C0S5 128 aa27.05■■□□□ 1.92
NME3-208ENST00000565379 MBL2P11226 248 aaPredicted RBP27.05■■□□□ 1.92
NME3-208ENST00000565379 KRT3P12035 628 aa27.05■■□□□ 1.92
NME3-208ENST00000565379 TCF3P15923 654 aa27.05■■□□□ 1.92
NME3-208ENST00000565379 RRM1P23921 792 aa27.05■■□□□ 1.92
NME3-208ENST00000565379 NOS2P35228 1153 aa27.05■■□□□ 1.92
NME3-208ENST00000565379 MATKP42679 507 aa27.05■■□□□ 1.92
NME3-208ENST00000565379 KPNA1P52294 538 aaPredicted RBP27.05■■□□□ 1.92
NME3-208ENST00000565379 PLEKHA7Q6IQ23 1121 aa27.05■■□□□ 1.92
NME3-208ENST00000565379 H2AFVQ71UI9 128 aa27.05■■□□□ 1.92
NME3-208ENST00000565379 TMEM139Q8IV31 216 aa27.05■■□□□ 1.92
NME3-208ENST00000565379 LRRC8AQ8IWT6 810 aa27.05■■□□□ 1.92
NME3-208ENST00000565379 YAF2Q8IY57 180 aa27.05■■□□□ 1.92
NME3-208ENST00000565379 EDEM1Q92611 657 aa27.05■■□□□ 1.92
NME3-208ENST00000565379 CLDN23Q96B33 292 aa27.05■■□□□ 1.92
NME3-208ENST00000565379 ZNF653Q96CK0 615 aa27.05■■□□□ 1.92
NME3-208ENST00000565379 PIWIL1Q96J94 861 aaKnown RBP27.05■■□□□ 1.92
NME3-208ENST00000565379 OSBPL6Q9BZF3 934 aa27.05■■□□□ 1.92
NME3-208ENST00000565379 TDP1Q9NUW8 608 aa27.05■■□□□ 1.92
NME3-208ENST00000565379 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP27.05■■□□□ 1.92
NME3-208ENST00000565379 CNOT8Q9UFF9 292 aaKnown RBP27.05■■□□□ 1.92
NME3-208ENST00000565379 TMEM59LQ9UK28 342 aa27.05■■□□□ 1.92
NME3-208ENST00000565379 STAP1Q9ULZ2 295 aa27.05■■□□□ 1.92
NME3-208ENST00000565379 TCRBV5S1A1TA0A578 114 aa27.04■■□□□ 1.92
NME3-208ENST00000565379 NDUFA10O95299 355 aa27.04■■□□□ 1.92
NME3-208ENST00000565379 FYNP06241 537 aa27.04■■□□□ 1.92
NME3-208ENST00000565379 COG7P83436 770 aa27.04■■□□□ 1.92
NME3-208ENST00000565379 TNK2Q07912 1038 aa27.04■■□□□ 1.92
NME3-208ENST00000565379 CCDC173Q0VFZ6 552 aa27.04■■□□□ 1.92
NME3-208ENST00000565379 ZC3H14Q6PJT7 736 aaKnown RBP27.04■■□□□ 1.92
NME3-208ENST00000565379 CELF5Q8N6W0 485 aaKnown RBP27.04■■□□□ 1.92
NME3-208ENST00000565379 CTNNBL1Q8WYA6 563 aaPredicted RBP27.04■■□□□ 1.92
NME3-208ENST00000565379 RNF38Q9H0F5 515 aa27.04■■□□□ 1.92
NME3-208ENST00000565379 TRPV5Q9NQA5 729 aa27.04■■□□□ 1.92
NME3-208ENST00000565379 SPTLC3Q9NUV7 552 aa27.04■■□□□ 1.92
NME3-208ENST00000565379 SOWAHDA6NJG2 315 aa27.03■■□□□ 1.92
NME3-208ENST00000565379 DPYSL4O14531 572 aa27.03■■□□□ 1.92
NME3-208ENST00000565379 CHADO15335 359 aa27.03■■□□□ 1.92
NME3-208ENST00000565379 GALCP54803 685 aa27.03■■□□□ 1.92
NME3-208ENST00000565379 NNTQ13423 1086 aa27.03■■□□□ 1.92
NME3-208ENST00000565379 TAF5Q15542 800 aa27.03■■□□□ 1.92
NME3-208ENST00000565379 TXNDC11Q6PKC3 985 aa27.03■■□□□ 1.92
NME3-208ENST00000565379 DEFB106AQ8N104 65 aa27.03■■□□□ 1.92
NME3-208ENST00000565379 TXLNBQ8N3L3 684 aa27.03■■□□□ 1.92
NME3-208ENST00000565379 FAM3CQ92520 227 aa27.03■■□□□ 1.92
NME3-208ENST00000565379 SLC22A12Q96S37 553 aa27.03■■□□□ 1.92
NME3-208ENST00000565379 CYP2S1Q96SQ9 504 aa27.03■■□□□ 1.92
NME3-208ENST00000565379 METTL5Q9NRN9 209 aaKnown RBP27.03■■□□□ 1.92
NME3-208ENST00000565379 GTSE1Q9NYZ3 720 aa27.03■■□□□ 1.92
NME3-208ENST00000565379 MARCH2Q9P0N8 246 aa27.03■■□□□ 1.92
NME3-208ENST00000565379 NAALADL1Q9UQQ1 740 aa27.03■■□□□ 1.92
NME3-208ENST00000565379 ZNF292O60281 2723 aa27.03■■□□□ 1.92
NME3-208ENST00000565379 ANAPC1Q9H1A4 1944 aa27.02■■□□□ 1.92
NME3-208ENST00000565379 PTMAP06454 111 aaKnown RBP27.02■■□□□ 1.92
NME3-208ENST00000565379 TMEM253P0C7T8 217 aa27.02■■□□□ 1.92
NME3-208ENST00000565379 DESP17661 470 aa27.02■■□□□ 1.92
NME3-208ENST00000565379 ABCB4P21439 1286 aa27.02■■□□□ 1.92
NME3-208ENST00000565379 GBP1P32455 592 aa27.02■■□□□ 1.92
NME3-208ENST00000565379 ID4P47928 161 aa27.02■■□□□ 1.92
NME3-208ENST00000565379 RNASE9P60153 205 aaKnown RBP27.02■■□□□ 1.92
NME3-208ENST00000565379 EFEMP1Q12805 493 aa27.02■■□□□ 1.92
NME3-208ENST00000565379 MAMLD1Q13495 774 aa27.02■■□□□ 1.92
NME3-208ENST00000565379 DCAF6Q58WW2 860 aa27.02■■□□□ 1.92
NME3-208ENST00000565379 PPP1R15BQ5SWA1 713 aa27.02■■□□□ 1.92
NME3-208ENST00000565379 DCUN1D2Q6PH85 259 aa27.02■■□□□ 1.92
NME3-208ENST00000565379 TSSK4Q6SA08 328 aa27.02■■□□□ 1.92
NME3-208ENST00000565379 SERPINB11Q96P15 392 aa27.02■■□□□ 1.92
NME3-208ENST00000565379 HBS1LQ9Y450 684 aaKnown RBP27.02■■□□□ 1.92
NME3-208ENST00000565379 CPQQ9Y646 472 aa27.02■■□□□ 1.92
NME3-208ENST00000565379 FAM170AA1A519 330 aa27.01■■□□□ 1.91
NME3-208ENST00000565379 ARHGAP6O43182 974 aa27.01■■□□□ 1.91
NME3-208ENST00000565379 GRAP2O75791 330 aa27.01■■□□□ 1.91
NME3-208ENST00000565379 TBX18O95935 607 aa27.01■■□□□ 1.91
NME3-208ENST00000565379 CYP1A2P05177 515 aa27.01■■□□□ 1.91
NME3-208ENST00000565379 KRT83P78385 493 aa27.01■■□□□ 1.91
NME3-208ENST00000565379 MTAPQ13126 283 aa27.01■■□□□ 1.91
NME3-208ENST00000565379 ERMP1Q7Z2K6 904 aa27.01■■□□□ 1.91
NME3-208ENST00000565379 USP13Q92995 863 aaPredicted RBP27.01■■□□□ 1.91
NME3-208ENST00000565379 KLF16Q9BXK1 252 aaPredicted RBP27.01■■□□□ 1.91
NME3-208ENST00000565379 THAP2Q9H0W7 228 aa27.01■■□□□ 1.91
NME3-208ENST00000565379 RASAL2Q9UJF2 1139 aa27.01■■□□□ 1.91
NME3-208ENST00000565379 OTOGLQ3ZCN5 2332 aa27.01■■□□□ 1.91
NME3-208ENST00000565379 FANCMQ8IYD8 2048 aa27■■□□□ 1.91
NME3-208ENST00000565379 KIF26AQ9ULI4 1882 aaPredicted RBP27■■□□□ 1.91
NME3-208ENST00000565379 MAGEA1P43355 309 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms