RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 MAN1C1Q9NR34 630 aa11.55□□□□□ -0.56
SF3B3-205ENST00000564899 DPP7Q9UHL4 492 aa11.55□□□□□ -0.56
SF3B3-205ENST00000564899 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.55□□□□□ -0.56
SF3B3-205ENST00000564899 ASB3Q9Y575 518 aa11.55□□□□□ -0.56
SF3B3-205ENST00000564899 SAR1BQ9Y6B6 198 aa11.55□□□□□ -0.56
SF3B3-205ENST00000564899 MYH10P35580 1976 aa11.55□□□□□ -0.56
SF3B3-205ENST00000564899 OTOGLQ3ZCN5 2332 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 SYNJ2BP-COX16A0A087WUM0 186 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 M0QYT0 321 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 CCL16O15467 120 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 PRPSAP2O60256 369 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 SRGAP2O75044 1071 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 ZMYND10O75800 440 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 ZDHHC11BP0C7U3 371 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 RALAP11233 206 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 RARGP13631 454 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 TCF4P15884 667 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 CXCR5P32302 372 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 ID4P47928 161 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 PGFP49763 221 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 HDAC4P56524 1084 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 RWDD2BP57060 319 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 PITX1P78337 314 aaPredicted RBP11.54□□□□□ -0.56
SF3B3-205ENST00000564899 SLC25A11Q02978 314 aaKnown RBP11.54□□□□□ -0.56
SF3B3-205ENST00000564899 DEUP1Q05D60 604 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 RAB6CQ53S08 254 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 ZFYVE27Q5T4F4 411 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 LRRC38Q5VT99 294 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 SCYL2Q6P3W7 929 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 ELMSAN1Q6PJG2 1045 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 TMEM184AQ6ZMB5 413 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 RTL10Q7L3V2 364 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 RSRC2Q7L4I2 434 aaKnown RBP11.54□□□□□ -0.56
SF3B3-205ENST00000564899 DNAJB7Q7Z6W7 309 aaPredicted RBP11.54□□□□□ -0.56
SF3B3-205ENST00000564899 TAC4Q86UU9 113 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 C12orf76Q8N812 135 aaPredicted RBP11.54□□□□□ -0.56
SF3B3-205ENST00000564899 ADAM32Q8TC27 787 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 ALG3Q92685 438 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 NT5C3BQ969T7 300 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 ZNF512Q96ME7 567 aaPredicted RBP11.54□□□□□ -0.56
SF3B3-205ENST00000564899 OSBPL9Q96SU4 736 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 ADAM33Q9BZ11 813 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 RAB6CQ9H0N0 254 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 ZWILCHQ9H900 591 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 DDIT4Q9NX09 232 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 OSER1Q9NX31 292 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 CLIC5Q9NZA1 410 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 TRPM5Q9NZQ8 1165 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 COX16Q9P0S2 106 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 UXTQ9UBK9 157 aaPredicted RBP11.54□□□□□ -0.56
SF3B3-205ENST00000564899 PCSK1NQ9UHG2 260 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 USP18Q9UMW8 372 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 PCDHA3Q9Y5H8 950 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 HCFC2Q9Y5Z7 792 aa11.54□□□□□ -0.56
SF3B3-205ENST00000564899 ZNF840PA6NDX5 716 aa11.53□□□□□ -0.56
SF3B3-205ENST00000564899 SPDYE4A6NLX3 237 aa11.53□□□□□ -0.56
SF3B3-205ENST00000564899 TRUB2O95900 331 aaKnown RBP11.53□□□□□ -0.56
SF3B3-205ENST00000564899 KRT1P04264 644 aa11.53□□□□□ -0.56
SF3B3-205ENST00000564899 KRT7P08729 469 aa11.53□□□□□ -0.56
SF3B3-205ENST00000564899 PRLRP16471 622 aa11.53□□□□□ -0.56
SF3B3-205ENST00000564899 IL1R2P27930 398 aa11.53□□□□□ -0.56
SF3B3-205ENST00000564899 HOXA9P31269 272 aa11.53□□□□□ -0.56
SF3B3-205ENST00000564899 GBP1P32455 592 aa11.53□□□□□ -0.56
SF3B3-205ENST00000564899 PEX5P50542 639 aa11.53□□□□□ -0.56
SF3B3-205ENST00000564899 ATXN1P54253 815 aaKnown RBP11.53□□□□□ -0.56
SF3B3-205ENST00000564899 NME3Q13232 169 aa11.53□□□□□ -0.56
SF3B3-205ENST00000564899 SMTNL2Q2TAL5 461 aa11.53□□□□□ -0.56
SF3B3-205ENST00000564899 TXNRD3NBQ6F5E7 133 aa11.53□□□□□ -0.56
SF3B3-205ENST00000564899 MSANTD2Q6P1R3 559 aa11.53□□□□□ -0.56
SF3B3-205ENST00000564899 SND1Q7KZF4 910 aaKnown RBP eCLIP11.53□□□□□ -0.56
SF3B3-205ENST00000564899 BNIPLQ7Z465 357 aa11.53□□□□□ -0.56
SF3B3-205ENST00000564899 POLNQ7Z5Q5 900 aa11.53□□□□□ -0.56
SF3B3-205ENST00000564899 FAM131BQ86XD5 332 aa11.53□□□□□ -0.56
SF3B3-205ENST00000564899 KATNAL2Q8IYT4 538 aa11.53□□□□□ -0.56
SF3B3-205ENST00000564899 COG1Q8WTW3 980 aa11.53□□□□□ -0.56
SF3B3-205ENST00000564899 HDAC7Q8WUI4 952 aa11.53□□□□□ -0.56
SF3B3-205ENST00000564899 CASP10Q92851 521 aa11.53□□□□□ -0.56
SF3B3-205ENST00000564899 RMDN1Q96DB5 314 aa11.53□□□□□ -0.56
SF3B3-205ENST00000564899 PGAP3Q96FM1 320 aaPredicted RBP11.53□□□□□ -0.56
SF3B3-205ENST00000564899 PBKQ96KB5 322 aa11.53□□□□□ -0.56
SF3B3-205ENST00000564899 SERPINB11Q96P15 392 aa11.53□□□□□ -0.56
SF3B3-205ENST00000564899 PEBP4Q96S96 227 aa11.53□□□□□ -0.56
SF3B3-205ENST00000564899 CDK5RAP1Q96SZ6 601 aaKnown RBP11.53□□□□□ -0.56
SF3B3-205ENST00000564899 CDCA3Q99618 268 aaPredicted RBP11.53□□□□□ -0.56
SF3B3-205ENST00000564899 CARD9Q9H257 536 aa11.53□□□□□ -0.56
SF3B3-205ENST00000564899 ZNF334Q9HCZ1 680 aaPredicted RBP11.53□□□□□ -0.56
SF3B3-205ENST00000564899 OLA1Q9NTK5 396 aaKnown RBP11.53□□□□□ -0.56
SF3B3-205ENST00000564899 KLHL11Q9NVR0 708 aa11.53□□□□□ -0.56
SF3B3-205ENST00000564899 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.53□□□□□ -0.56
SF3B3-205ENST00000564899 DDX56Q9NY93 547 aaKnown RBP11.53□□□□□ -0.56
SF3B3-205ENST00000564899 CALCOCO1Q9P1Z2 691 aa11.53□□□□□ -0.56
SF3B3-205ENST00000564899 CDC23Q9UJX2 597 aa11.53□□□□□ -0.56
SF3B3-205ENST00000564899 NUDT5Q9UKK9 219 aa11.53□□□□□ -0.56
SF3B3-205ENST00000564899 SORCS3Q9UPU3 1222 aa11.53□□□□□ -0.56
SF3B3-205ENST00000564899 ACACBO00763 2458 aa11.52□□□□□ -0.56
SF3B3-205ENST00000564899 CES2O00748 559 aa11.52□□□□□ -0.57
SF3B3-205ENST00000564899 ZNF185O15231 689 aa11.52□□□□□ -0.57
SF3B3-205ENST00000564899 CEP104O60308 925 aa11.52□□□□□ -0.57
SF3B3-205ENST00000564899 TLR5O60602 858 aa11.52□□□□□ -0.57
SF3B3-205ENST00000564899 XYLBO75191 536 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms