RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 WBP2Q969T9 261 aa16.64■□□□□ 0.25
RAB40C-208ENST00000564703 DNAJC7Q99615 494 aa16.64■□□□□ 0.25
RAB40C-208ENST00000564703 DDX50Q9BQ39 737 aaKnown RBP16.64■□□□□ 0.25
RAB40C-208ENST00000564703 SYT11Q9BT88 431 aa16.64■□□□□ 0.25
RAB40C-208ENST00000564703 SPHK2Q9NRA0 654 aa16.64■□□□□ 0.25
RAB40C-208ENST00000564703 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.64■□□□□ 0.25
RAB40C-208ENST00000564703 DDIT4Q9NX09 232 aa16.64■□□□□ 0.25
RAB40C-208ENST00000564703 COX16Q9P0S2 106 aa16.64■□□□□ 0.25
RAB40C-208ENST00000564703 AGO1Q9UL18 857 aaKnown RBP16.64■□□□□ 0.25
RAB40C-208ENST00000564703 NDRG2Q9UN36 371 aaKnown RBP16.64■□□□□ 0.25
RAB40C-208ENST00000564703 TICRRQ7Z2Z1 1910 aa16.63■□□□□ 0.25
RAB40C-208ENST00000564703 M0QYT0 321 aa16.63■□□□□ 0.25
RAB40C-208ENST00000564703 DDX3XO00571 662 aaKnown RBP eCLIP16.63■□□□□ 0.25
RAB40C-208ENST00000564703 KLKB1P03952 638 aa16.63■□□□□ 0.25
RAB40C-208ENST00000564703 ADH5P11766 374 aa16.63■□□□□ 0.25
RAB40C-208ENST00000564703 ABCB4P21439 1286 aa16.63■□□□□ 0.25
RAB40C-208ENST00000564703 GRSF1Q12849 480 aaKnown RBP eCLIP16.63■□□□□ 0.25
RAB40C-208ENST00000564703 NME3Q13232 169 aa16.63■□□□□ 0.25
RAB40C-208ENST00000564703 MTA1Q13330 715 aa16.63■□□□□ 0.25
RAB40C-208ENST00000564703 PREPLQ4J6C6 727 aaPredicted RBP16.63■□□□□ 0.25
RAB40C-208ENST00000564703 ADGRF1Q5T601 910 aa16.63■□□□□ 0.25
RAB40C-208ENST00000564703 HGSNATQ68CP4 663 aa16.63■□□□□ 0.25
RAB40C-208ENST00000564703 ASTLQ6HA08 431 aaPredicted RBP16.63■□□□□ 0.25
RAB40C-208ENST00000564703 DNAJC24Q6P3W2 148 aa16.63■□□□□ 0.25
RAB40C-208ENST00000564703 Q6ZNB5 142 aa16.63■□□□□ 0.25
RAB40C-208ENST00000564703 TPGS1Q6ZTW0 290 aa16.63■□□□□ 0.25
RAB40C-208ENST00000564703 TAC4Q86UU9 113 aa16.63■□□□□ 0.25
RAB40C-208ENST00000564703 ATP6V0D2Q8N8Y2 350 aa16.63■□□□□ 0.25
RAB40C-208ENST00000564703 AZIN2Q96A70 460 aa16.63■□□□□ 0.25
RAB40C-208ENST00000564703 TRIM11Q96F44 468 aa16.63■□□□□ 0.25
RAB40C-208ENST00000564703 XPO6Q96QU8 1125 aaKnown RBP16.63■□□□□ 0.25
RAB40C-208ENST00000564703 DDX23Q9BUQ8 820 aaKnown RBP16.63■□□□□ 0.25
RAB40C-208ENST00000564703 METTL5Q9NRN9 209 aaKnown RBP16.63■□□□□ 0.25
RAB40C-208ENST00000564703 PAXBP1Q9Y5B6 917 aa16.63■□□□□ 0.25
RAB40C-208ENST00000564703 OTOL1A6NHN0 477 aaPredicted RBP16.62■□□□□ 0.25
RAB40C-208ENST00000564703 SIGLEC16A6NMB1 481 aa16.62■□□□□ 0.25
RAB40C-208ENST00000564703 GREM1O60565 184 aa16.62■□□□□ 0.25
RAB40C-208ENST00000564703 MFAP3LO75121 409 aa16.62■□□□□ 0.25
RAB40C-208ENST00000564703 LATS1O95835 1130 aa16.62■□□□□ 0.25
RAB40C-208ENST00000564703 PDGFBP01127 241 aaPredicted RBP16.62■□□□□ 0.25
RAB40C-208ENST00000564703 CYP17A1P05093 508 aa16.62■□□□□ 0.25
RAB40C-208ENST00000564703 PDGFRAP16234 1089 aa16.62■□□□□ 0.25
RAB40C-208ENST00000564703 SDC4P31431 198 aa16.62■□□□□ 0.25
RAB40C-208ENST00000564703 CCR1P32246 355 aa16.62■□□□□ 0.25
RAB40C-208ENST00000564703 SULT1E1P49888 294 aa16.62■□□□□ 0.25
RAB40C-208ENST00000564703 GALK1P51570 392 aa16.62■□□□□ 0.25
RAB40C-208ENST00000564703 DEUP1Q05D60 604 aa16.62■□□□□ 0.25
RAB40C-208ENST00000564703 PTP4A2Q12974 167 aa16.62■□□□□ 0.25
RAB40C-208ENST00000564703 PON2Q15165 354 aa16.62■□□□□ 0.25
RAB40C-208ENST00000564703 SLC25A52Q3SY17 297 aa16.62■□□□□ 0.25
RAB40C-208ENST00000564703 ZC3H12AQ5D1E8 599 aaKnown RBP16.62■□□□□ 0.25
RAB40C-208ENST00000564703 DCUN1D2Q6PH85 259 aa16.62■□□□□ 0.25
RAB40C-208ENST00000564703 NUDT18Q6ZVK8 323 aa16.62■□□□□ 0.25
RAB40C-208ENST00000564703 MON1BQ7L1V2 547 aa16.62■□□□□ 0.25
RAB40C-208ENST00000564703 TMEM25Q86YD3 366 aa16.62■□□□□ 0.25
RAB40C-208ENST00000564703 C3orf20Q8ND61 904 aa16.62■□□□□ 0.25
RAB40C-208ENST00000564703 CCDC42Q96M95 316 aa16.62■□□□□ 0.25
RAB40C-208ENST00000564703 P2RY13Q9BPV8 354 aa16.62■□□□□ 0.25
RAB40C-208ENST00000564703 BBS2Q9BXC9 721 aa16.62■□□□□ 0.25
RAB40C-208ENST00000564703 OSBPL6Q9BZF3 934 aa16.62■□□□□ 0.25
RAB40C-208ENST00000564703 WDCPQ9H6R7 721 aa16.62■□□□□ 0.25
RAB40C-208ENST00000564703 LTB4R2Q9NPC1 389 aa16.62■□□□□ 0.25
RAB40C-208ENST00000564703 ABHD10Q9NUJ1 306 aa16.62■□□□□ 0.25
RAB40C-208ENST00000564703 PARVAQ9NVD7 372 aa16.62■□□□□ 0.25
RAB40C-208ENST00000564703 TAS2R14Q9NYV8 317 aa16.62■□□□□ 0.25
RAB40C-208ENST00000564703 TMEM59LQ9UK28 342 aa16.62■□□□□ 0.25
RAB40C-208ENST00000564703 F5P12259 2224 aa16.61■□□□□ 0.25
RAB40C-208ENST00000564703 IRAK2O43187 625 aa16.61■□□□□ 0.25
RAB40C-208ENST00000564703 AKR1B10O60218 316 aa16.61■□□□□ 0.25
RAB40C-208ENST00000564703 ACSL4O60488 711 aa16.61■□□□□ 0.25
RAB40C-208ENST00000564703 MOCS2O96007 188 aaPredicted RBP16.61■□□□□ 0.25
RAB40C-208ENST00000564703 IGLV3-27P01718 113 aa16.61■□□□□ 0.25
RAB40C-208ENST00000564703 PLEKP08567 350 aaPredicted RBP16.61■□□□□ 0.25
RAB40C-208ENST00000564703 MYBL1P10243 752 aa16.61■□□□□ 0.25
RAB40C-208ENST00000564703 EIF4A3P38919 411 aaKnown RBP16.61■□□□□ 0.25
RAB40C-208ENST00000564703 GSCP56915 257 aaPredicted RBP16.61■□□□□ 0.25
RAB40C-208ENST00000564703 TBX2Q13207 712 aaPredicted RBP16.61■□□□□ 0.25
RAB40C-208ENST00000564703 CCDC122Q5T0U0 273 aa16.61■□□□□ 0.25
RAB40C-208ENST00000564703 CPXM2Q8N436 756 aa16.61■□□□□ 0.25
RAB40C-208ENST00000564703 DDI1Q8WTU0 396 aa16.61■□□□□ 0.25
RAB40C-208ENST00000564703 RXFP2Q8WXD0 754 aa16.61■□□□□ 0.25
RAB40C-208ENST00000564703 CD101Q93033 1021 aa16.61■□□□□ 0.25
RAB40C-208ENST00000564703 TMA16Q96EY4 203 aaKnown RBP16.61■□□□□ 0.25
RAB40C-208ENST00000564703 BTN2A3PQ96KV6 586 aa16.61■□□□□ 0.25
RAB40C-208ENST00000564703 FCRL2Q96LA5 508 aaPredicted RBP16.61■□□□□ 0.25
RAB40C-208ENST00000564703 NPY6RQ99463 290 aa16.61■□□□□ 0.25
RAB40C-208ENST00000564703 LRFN3Q9BTN0 628 aa16.61■□□□□ 0.25
RAB40C-208ENST00000564703 FOXQ1Q9C009 403 aa16.61■□□□□ 0.25
RAB40C-208ENST00000564703 C11orf16Q9NQ32 467 aa16.61■□□□□ 0.25
RAB40C-208ENST00000564703 ARHGAP20Q9P2F6 1191 aa16.61■□□□□ 0.25
RAB40C-208ENST00000564703 MYOFQ9NZM1 2061 aa16.6■□□□□ 0.25
RAB40C-208ENST00000564703 SSU72P8A0A1W2PR75 194 aa16.6■□□□□ 0.25
RAB40C-208ENST00000564703 TYW5A2RUC4 315 aaKnown RBP16.6■□□□□ 0.25
RAB40C-208ENST00000564703 GOLGA6L6A8MZA4 724 aa16.6■□□□□ 0.25
RAB40C-208ENST00000564703 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.6■□□□□ 0.25
RAB40C-208ENST00000564703 NEDD8-MDP1E9PL57 170 aa16.6■□□□□ 0.25
RAB40C-208ENST00000564703 TRDMT1O14717 391 aaKnown RBP16.6■□□□□ 0.25
RAB40C-208ENST00000564703 ADCY5O95622 1261 aa16.6■□□□□ 0.25
RAB40C-208ENST00000564703 AOC1P19801 751 aa16.6■□□□□ 0.25
RAB40C-208ENST00000564703 RRM1P23921 792 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms