RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 STON1Q9Y6Q2 735 aa25.01■■□□□ 1.59
NME3-206ENST00000564252 PCDH15Q96QU1 1955 aa25■■□□□ 1.59
NME3-206ENST00000564252 SLC12A8A0AV02 714 aa25■■□□□ 1.59
NME3-206ENST00000564252 TRIM49BA6NDI0 452 aa25■■□□□ 1.59
NME3-206ENST00000564252 CFIP05156 583 aa25■■□□□ 1.59
NME3-206ENST00000564252 LRRC63Q05C16 580 aa25■■□□□ 1.59
NME3-206ENST00000564252 SGO2Q562F6 1265 aa25■■□□□ 1.59
NME3-206ENST00000564252 FAM217AQ8IXS0 508 aa25■■□□□ 1.59
NME3-206ENST00000564252 PLD4Q96BZ4 506 aa25■■□□□ 1.59
NME3-206ENST00000564252 PIWIL1Q96J94 861 aaKnown RBP25■■□□□ 1.59
NME3-206ENST00000564252 CAPN10Q9HC96 672 aa25■■□□□ 1.59
NME3-206ENST00000564252 FSCN3Q9NQT6 498 aa25■■□□□ 1.59
NME3-206ENST00000564252 THAP10Q9P2Z0 257 aaPredicted RBP25■■□□□ 1.59
NME3-206ENST00000564252 ARMCX3Q9UH62 379 aaPredicted RBP25■■□□□ 1.59
NME3-206ENST00000564252 SLC6A14Q9UN76 642 aa25■■□□□ 1.59
NME3-206ENST00000564252 ADAMTS9Q9P2N4 1935 aa25■■□□□ 1.59
NME3-206ENST00000564252 NPC1O15118 1278 aa24.99■■□□□ 1.59
NME3-206ENST00000564252 SMC2O95347 1197 aa24.99■■□□□ 1.59
NME3-206ENST00000564252 SERPINF2P08697 491 aa24.99■■□□□ 1.59
NME3-206ENST00000564252 IL12RB1P42701 662 aa24.99■■□□□ 1.59
NME3-206ENST00000564252 BST2Q10589 180 aaKnown RBP24.99■■□□□ 1.59
NME3-206ENST00000564252 ENPP2Q13822 863 aa24.99■■□□□ 1.59
NME3-206ENST00000564252 DEFB124Q8NES8 71 aa24.99■■□□□ 1.59
NME3-206ENST00000564252 CLEC4EQ9ULY5 219 aa24.99■■□□□ 1.59
NME3-206ENST00000564252 WASF3Q9UPY6 502 aa24.99■■□□□ 1.59
NME3-206ENST00000564252 CFAP47Q6ZTR5 3102 aa24.99■■□□□ 1.59
NME3-206ENST00000564252 CYBBP04839 570 aa24.98■■□□□ 1.59
NME3-206ENST00000564252 YWHAEP62258 255 aaKnown RBP24.98■■□□□ 1.59
NME3-206ENST00000564252 ADIGQ0VDE8 80 aa24.98■■□□□ 1.59
NME3-206ENST00000564252 STARD3Q14849 445 aa24.98■■□□□ 1.59
NME3-206ENST00000564252 TRIP4Q15650 581 aaPredicted RBP24.98■■□□□ 1.59
NME3-206ENST00000564252 FUT11Q495W5 492 aa24.98■■□□□ 1.59
NME3-206ENST00000564252 ANKS1BQ7Z6G8 1248 aa24.98■■□□□ 1.59
NME3-206ENST00000564252 RABEPKQ7Z6M1 372 aa24.98■■□□□ 1.59
NME3-206ENST00000564252 TRIML1Q8N9V2 468 aa24.98■■□□□ 1.59
NME3-206ENST00000564252 SMARCE1Q969G3 411 aa24.98■■□□□ 1.59
NME3-206ENST00000564252 ZNF419Q96HQ0 510 aaPredicted RBP24.98■■□□□ 1.59
NME3-206ENST00000564252 HSPA12BQ96MM6 686 aa24.98■■□□□ 1.59
NME3-206ENST00000564252 LRRC4Q9HBW1 653 aa24.98■■□□□ 1.59
NME3-206ENST00000564252 HESX1Q9UBX0 185 aa24.98■■□□□ 1.59
NME3-206ENST00000564252 GOLGA6L4A6NEF3 574 aa24.97■■□□□ 1.59
NME3-206ENST00000564252 O00370 1275 aa24.97■■□□□ 1.59
NME3-206ENST00000564252 VDRP11473 427 aa24.97■■□□□ 1.59
NME3-206ENST00000564252 CD19P15391 556 aa24.97■■□□□ 1.59
NME3-206ENST00000564252 GFPT1Q06210 699 aaPredicted RBP24.97■■□□□ 1.59
NME3-206ENST00000564252 LRMPQ12912 555 aa24.97■■□□□ 1.59
NME3-206ENST00000564252 KIAA1324Q6UXG2 1013 aaKnown RBP24.97■■□□□ 1.59
NME3-206ENST00000564252 METTL3Q86U44 580 aaKnown RBP24.97■■□□□ 1.59
NME3-206ENST00000564252 FMNL3Q8IVF7 1028 aa24.97■■□□□ 1.59
NME3-206ENST00000564252 RBBP8NLQ8NC74 664 aaPredicted RBP24.97■■□□□ 1.59
NME3-206ENST00000564252 UBA3Q8TBC4 463 aa24.97■■□□□ 1.59
NME3-206ENST00000564252 GTPBP4Q9BZE4 634 aaKnown RBP24.97■■□□□ 1.59
NME3-206ENST00000564252 MKRN2Q9H000 416 aaKnown RBP24.97■■□□□ 1.59
NME3-206ENST00000564252 OLA1Q9NTK5 396 aaKnown RBP24.97■■□□□ 1.59
NME3-206ENST00000564252 YJEFN3A6XGL0 299 aa24.96■■□□□ 1.59
NME3-206ENST00000564252 E7ENQ6 273 aa24.96■■□□□ 1.59
NME3-206ENST00000564252 TBXAS1P24557 533 aaPredicted RBP24.96■■□□□ 1.59
NME3-206ENST00000564252 ZNF132P52740 706 aa24.96■■□□□ 1.59
NME3-206ENST00000564252 FOXC1Q12948 553 aa24.96■■□□□ 1.59
NME3-206ENST00000564252 SEMA3BQ13214 749 aa24.96■■□□□ 1.59
NME3-206ENST00000564252 PKDCCQ504Y2 493 aa24.96■■□□□ 1.59
NME3-206ENST00000564252 PIP4P1Q86T03 277 aa24.96■■□□□ 1.59
NME3-206ENST00000564252 DDI1Q8WTU0 396 aa24.96■■□□□ 1.59
NME3-206ENST00000564252 UCMAQ8WVF2 138 aa24.96■■□□□ 1.59
NME3-206ENST00000564252 KCTD13Q8WZ19 329 aa24.96■■□□□ 1.59
NME3-206ENST00000564252 TIGD1Q96MW7 591 aa24.96■■□□□ 1.59
NME3-206ENST00000564252 IPO9Q96P70 1041 aaKnown RBP24.96■■□□□ 1.59
NME3-206ENST00000564252 SLC2A11Q9BYW1 496 aa24.96■■□□□ 1.59
NME3-206ENST00000564252 PRDM16Q9HAZ2 1276 aa24.96■■□□□ 1.59
NME3-206ENST00000564252 ELOVL2Q9NXB9 296 aa24.96■■□□□ 1.59
NME3-206ENST00000564252 HBS1LQ9Y450 684 aaKnown RBP24.96■■□□□ 1.59
NME3-206ENST00000564252 UPK3BL1B0FP48 263 aa24.95■■□□□ 1.58
NME3-206ENST00000564252 UPK3BL2E5RIL1 263 aa24.95■■□□□ 1.58
NME3-206ENST00000564252 NDUFS2O75306 463 aa24.95■■□□□ 1.58
NME3-206ENST00000564252 SETSIPP0DME0 302 aa24.95■■□□□ 1.58
NME3-206ENST00000564252 FMO5P49326 533 aa24.95■■□□□ 1.58
NME3-206ENST00000564252 ATXN3P54252 364 aaPredicted RBP24.95■■□□□ 1.58
NME3-206ENST00000564252 ZNF234Q14588 700 aa24.95■■□□□ 1.58
NME3-206ENST00000564252 EIF4HQ15056 248 aaKnown RBP24.95■■□□□ 1.58
NME3-206ENST00000564252 BSPRYQ5W0U4 402 aa24.95■■□□□ 1.58
NME3-206ENST00000564252 TMEM215Q68D42 235 aa24.95■■□□□ 1.58
NME3-206ENST00000564252 EDEM1Q92611 657 aa24.95■■□□□ 1.58
NME3-206ENST00000564252 GTPBP2Q9BX10 602 aaKnown RBP24.95■■□□□ 1.58
NME3-206ENST00000564252 USP36Q9P275 1121 aaKnown RBP24.95■■□□□ 1.58
NME3-206ENST00000564252 KIAA1257Q9ULG3 409 aa24.95■■□□□ 1.58
NME3-206ENST00000564252 WDFY3Q8IZQ1 3526 aa24.95■■□□□ 1.58
NME3-206ENST00000564252 CKAP5Q14008 2032 aa24.95■■□□□ 1.58
NME3-206ENST00000564252 CACNA1EQ15878 2313 aa24.94■■□□□ 1.58
NME3-206ENST00000564252 AKAP13Q12802 2813 aa24.94■■□□□ 1.58
NME3-206ENST00000564252 HOXD9P28356 352 aaPredicted RBP24.94■■□□□ 1.58
NME3-206ENST00000564252 CD6P30203 668 aa24.94■■□□□ 1.58
NME3-206ENST00000564252 HARS2P49590 506 aaKnown RBP24.94■■□□□ 1.58
NME3-206ENST00000564252 SIX6OS1Q8N1H7 587 aa24.94■■□□□ 1.58
NME3-206ENST00000564252 SCML4Q8N228 414 aa24.94■■□□□ 1.58
NME3-206ENST00000564252 RNF139Q8WU17 664 aa24.94■■□□□ 1.58
NME3-206ENST00000564252 TFAP2BQ92481 460 aa24.94■■□□□ 1.58
NME3-206ENST00000564252 SLC32A1Q9H598 525 aa24.94■■□□□ 1.58
NME3-206ENST00000564252 METTL14Q9HCE5 456 aaKnown RBP24.94■■□□□ 1.58
NME3-206ENST00000564252 ITM2CQ9NQX7 267 aa24.94■■□□□ 1.58
NME3-206ENST00000564252 SFMBT1Q9UHJ3 866 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms