RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, human

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-222	ENST00000564228	KANSL1L	A0AUZ9	987 aa		11.45	□□□□□ -0.58
TCF4-222	ENST00000564228	WDR91	A4D1P6	747 aa		11.45	□□□□□ -0.58
TCF4-222	ENST00000564228	RRN3P2	A6NIE6	340 aa		11.45	□□□□□ -0.58
TCF4-222	ENST00000564228		H0YCG3	227 aa		11.45	□□□□□ -0.58
TCF4-222	ENST00000564228		K7ERI5	159 aa		11.45	□□□□□ -0.58
TCF4-222	ENST00000564228	HAS3	O00219	553 aa		11.45	□□□□□ -0.58
TCF4-222	ENST00000564228	PMM2	O15305	246 aa		11.45	□□□□□ -0.58
TCF4-222	ENST00000564228	SUPT3H	O75486	399 aa		11.45	□□□□□ -0.58
TCF4-222	ENST00000564228	TNFAIP8	O95379	198 aa		11.45	□□□□□ -0.58
TCF4-222	ENST00000564228	PGM3	O95394	542 aa		11.45	□□□□□ -0.58
TCF4-222	ENST00000564228	VTN	P04004	478 aa		11.45	□□□□□ -0.58
TCF4-222	ENST00000564228	CD48	P09326	243 aa		11.45	□□□□□ -0.58
TCF4-222	ENST00000564228	ETV4	P43268	484 aa		11.45	□□□□□ -0.58
TCF4-222	ENST00000564228	CYP2J2	P51589	502 aa		11.45	□□□□□ -0.58
TCF4-222	ENST00000564228	FMO1	Q01740	532 aa		11.45	□□□□□ -0.58
TCF4-222	ENST00000564228	GSTM4	Q03013	218 aa		11.45	□□□□□ -0.58
TCF4-222	ENST00000564228	FOLH1	Q04609	750 aa		11.45	□□□□□ -0.58
TCF4-222	ENST00000564228	PDIA2	Q13087	525 aa	Known RBP	11.45	□□□□□ -0.58
TCF4-222	ENST00000564228	LPIN1	Q14693	890 aa		11.45	□□□□□ -0.58
TCF4-222	ENST00000564228	PDCD4	Q53EL6	469 aa	Known RBP	11.45	□□□□□ -0.58
TCF4-222	ENST00000564228	RFX8	Q6ZV50	586 aa		11.45	□□□□□ -0.58
TCF4-222	ENST00000564228	ARHGEF19	Q8IW93	802 aa		11.45	□□□□□ -0.58
TCF4-222	ENST00000564228	C7orf31	Q8N865	590 aa		11.45	□□□□□ -0.58
TCF4-222	ENST00000564228	APOPT1	Q96IL0	206 aa		11.45	□□□□□ -0.58
TCF4-222	ENST00000564228	MTG1	Q9BT17	334 aa	Predicted RBP	11.45	□□□□□ -0.58
TCF4-222	ENST00000564228	CCDC106	Q9BWC9	280 aa		11.45	□□□□□ -0.58
TCF4-222	ENST00000564228	RABGEF1	Q9UJ41	708 aa		11.45	□□□□□ -0.58
TCF4-222	ENST00000564228	SOX13	Q9UN79	622 aa		11.45	□□□□□ -0.58
TCF4-222	ENST00000564228	EXOC7	Q9UPT5	735 aa		11.45	□□□□□ -0.58
TCF4-222	ENST00000564228	SH3PXD2B	A1X283	911 aa		11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	TTLL13P	A6NNM8	815 aa		11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	HNRNPDL	O14979	420 aa	Known RBP	11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	KPNA6	O60684	536 aa		11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	TRMU	O75648	421 aa	Known RBP	11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	SGPL1	O95470	568 aa		11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	ASGR1	P07306	291 aa		11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	CPOX	P36551	454 aa		11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	FDFT1	P37268	417 aa		11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	CPA2	P48052	419 aa		11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	MNX1	P50219	401 aa	Predicted RBP	11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	PDE1B	Q01064	536 aa		11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	SLC18A2	Q05940	514 aa		11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	BTK	Q06187	659 aa		11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	APOF	Q13790	326 aa		11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	TFDP1	Q14186	410 aa		11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	KRT81	Q14533	505 aa		11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	KCNA10	Q16322	511 aa		11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	OGFRL1	Q5TC84	451 aa	Predicted RBP	11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	ACAD10	Q6JQN1	1059 aa		11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	FBXL19	Q6PCT2	694 aa		11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	KLHL35	Q6PF15	583 aa		11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	TAS1R3	Q7RTX0	852 aa		11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	TMC7	Q7Z402	723 aa		11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	PATL1	Q86TB9	770 aa	Known RBP	11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	ALYREF	Q86V81	257 aa	Known RBP	11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	MAP4K3	Q8IVH8	894 aa		11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	KATNAL2	Q8IYT4	538 aa		11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	DNAJC5G	Q8N7S2	189 aa		11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	ATP11C	Q8NB49	1132 aa		11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	FBXO27	Q8NI29	283 aa		11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	PLEKHO2	Q8TD55	490 aa		11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	TMEM174	Q8WUU8	243 aa		11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	C17orf50	Q8WW18	174 aa		11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	BIRC8	Q96P09	236 aa		11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	SIKE1	Q9BRV8	207 aa		11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	FAM49A	Q9H0Q0	323 aa	Predicted RBP	11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	PCIF1	Q9H4Z3	704 aa		11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	ACSS3	Q9H6R3	686 aa		11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	CNTN3	Q9P232	1028 aa		11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	ARMCX1	Q9P291	453 aa		11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	SLC17A7	Q9P2U7	560 aa		11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	RAB26	Q9ULW5	256 aa		11.44	□□□□□ -0.58
TCF4-222	ENST00000564228	LPXN	O60711	386 aa		11.43	□□□□□ -0.58
TCF4-222	ENST00000564228	FAM155B	O75949	473 aa		11.43	□□□□□ -0.58
TCF4-222	ENST00000564228	PDE5A	O76074	875 aa		11.43	□□□□□ -0.58
TCF4-222	ENST00000564228	RALA	P11233	206 aa		11.43	□□□□□ -0.58
TCF4-222	ENST00000564228	AOC1	P19801	751 aa		11.43	□□□□□ -0.58
TCF4-222	ENST00000564228	PEX2	P28328	305 aa		11.43	□□□□□ -0.58
TCF4-222	ENST00000564228	NR1H2	P55055	460 aa		11.43	□□□□□ -0.58
TCF4-222	ENST00000564228	ZNF200	P98182	395 aa	Predicted RBP	11.43	□□□□□ -0.58
TCF4-222	ENST00000564228	FASTKD3	Q14CZ7	662 aa	Known RBP	11.43	□□□□□ -0.58
TCF4-222	ENST00000564228	FAM47C	Q5HY64	1035 aa		11.43	□□□□□ -0.58
TCF4-222	ENST00000564228	RNF111	Q6ZNA4	994 aa		11.43	□□□□□ -0.58
TCF4-222	ENST00000564228	TRIM67	Q6ZTA4	783 aa		11.43	□□□□□ -0.58
TCF4-222	ENST00000564228	CCDC80	Q76M96	950 aa		11.43	□□□□□ -0.58
TCF4-222	ENST00000564228	GSTA5	Q7RTV2	222 aa		11.43	□□□□□ -0.58
TCF4-222	ENST00000564228	TMEM126B	Q8IUX1	230 aa		11.43	□□□□□ -0.58
TCF4-222	ENST00000564228	ERI1	Q8IV48	349 aa	Known RBP	11.43	□□□□□ -0.58
TCF4-222	ENST00000564228	ZBTB8OS	Q8IWT0	167 aa		11.43	□□□□□ -0.58
TCF4-222	ENST00000564228	ALLC	Q8N6M5	410 aa		11.43	□□□□□ -0.58
TCF4-222	ENST00000564228	METTL25	Q8N6Q8	603 aa		11.43	□□□□□ -0.58
TCF4-222	ENST00000564228	ZFP28	Q8NHY6	868 aa		11.43	□□□□□ -0.58
TCF4-222	ENST00000564228	TRIM11	Q96F44	468 aa		11.43	□□□□□ -0.58
TCF4-222	ENST00000564228	VPS50	Q96JG6	964 aa		11.43	□□□□□ -0.58
TCF4-222	ENST00000564228	CLPTM1L	Q96KA5	538 aa		11.43	□□□□□ -0.58
TCF4-222	ENST00000564228	CORO1B	Q9BR76	489 aa		11.43	□□□□□ -0.58
TCF4-222	ENST00000564228	CBWD1	Q9BRT8	395 aa		11.43	□□□□□ -0.58
TCF4-222	ENST00000564228	SENP6	Q9GZR1	1112 aa	Predicted RBP	11.43	□□□□□ -0.58
TCF4-222	ENST00000564228	BRD8	Q9H0E9	1235 aa		11.43	□□□□□ -0.58
TCF4-222	ENST00000564228	DDX18	Q9NVP1	670 aa	Known RBP	11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms