RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 APOBEC2Q9Y235 224 aaKnown RBP19.61■□□□□ 0.73
NME3-204ENST00000563498 ANKRD11Q6UB99 2663 aaPredicted RBP19.61■□□□□ 0.73
NME3-204ENST00000563498 MYL1P05976 194 aa19.6■□□□□ 0.73
NME3-204ENST00000563498 VAMP7P51809 220 aa19.6■□□□□ 0.73
NME3-204ENST00000563498 IL27RAQ6UWB1 636 aa19.6■□□□□ 0.73
NME3-204ENST00000563498 CCNI2Q6ZMN8 369 aaPredicted RBP19.6■□□□□ 0.73
NME3-204ENST00000563498 ANKS1BQ7Z6G8 1248 aa19.6■□□□□ 0.73
NME3-204ENST00000563498 TMPRSS6Q8IU80 811 aa19.6■□□□□ 0.73
NME3-204ENST00000563498 CPXM2Q8N436 756 aa19.6■□□□□ 0.73
NME3-204ENST00000563498 SIPA1Q96FS4 1042 aa19.6■□□□□ 0.73
NME3-204ENST00000563498 PIWIL1Q96J94 861 aaKnown RBP19.6■□□□□ 0.73
NME3-204ENST00000563498 SLC2A11Q9BYW1 496 aa19.6■□□□□ 0.73
NME3-204ENST00000563498 KIAA1522Q9P206 1035 aaPredicted RBP19.6■□□□□ 0.73
NME3-204ENST00000563498 PCOLCE2Q9UKZ9 415 aa19.6■□□□□ 0.73
NME3-204ENST00000563498 TRAF3IP3Q9Y228 551 aa19.6■□□□□ 0.73
NME3-204ENST00000563498 METTL12A8MUP2 240 aa19.59■□□□□ 0.73
NME3-204ENST00000563498 KCNJ18B7U540 433 aa19.59■□□□□ 0.73
NME3-204ENST00000563498 CALUO43852 315 aaPredicted RBP19.59■□□□□ 0.73
NME3-204ENST00000563498 CER1O95813 267 aa19.59■□□□□ 0.73
NME3-204ENST00000563498 CYBBP04839 570 aa19.59■□□□□ 0.73
NME3-204ENST00000563498 CORO1AP31146 461 aaKnown RBP19.59■□□□□ 0.73
NME3-204ENST00000563498 NFIL3Q16649 462 aa19.59■□□□□ 0.73
NME3-204ENST00000563498 DCAF12L1Q5VU92 463 aa19.59■□□□□ 0.73
NME3-204ENST00000563498 INTS8Q75QN2 995 aaKnown RBP19.59■□□□□ 0.73
NME3-204ENST00000563498 ARHGAP18Q8N392 663 aa19.59■□□□□ 0.73
NME3-204ENST00000563498 ZCCHC9Q8N567 271 aaKnown RBP19.59■□□□□ 0.73
NME3-204ENST00000563498 RBBP8NLQ8NC74 664 aaPredicted RBP19.59■□□□□ 0.73
NME3-204ENST00000563498 TAS1R2Q8TE23 839 aa19.59■□□□□ 0.73
NME3-204ENST00000563498 PRCCQ92733 491 aaPredicted RBP19.59■□□□□ 0.73
NME3-204ENST00000563498 NUP58Q9BVL2 599 aa19.59■□□□□ 0.73
NME3-204ENST00000563498 UBXN6Q9BZV1 441 aa19.59■□□□□ 0.73
NME3-204ENST00000563498 PCED1AQ9H1Q7 454 aa19.59■□□□□ 0.73
NME3-204ENST00000563498 ELOVL2Q9NXB9 296 aa19.59■□□□□ 0.73
NME3-204ENST00000563498 RASAL2Q9UJF2 1139 aa19.59■□□□□ 0.73
NME3-204ENST00000563498 CFAP45Q9UL16 551 aa19.59■□□□□ 0.73
NME3-204ENST00000563498 AGO1Q9UL18 857 aaKnown RBP19.59■□□□□ 0.73
NME3-204ENST00000563498 ITPR1Q14643 2758 aa19.59■□□□□ 0.73
NME3-204ENST00000563498 BCAT2O15382 392 aaPredicted RBP19.58■□□□□ 0.72
NME3-204ENST00000563498 TIMM44O43615 452 aa19.58■□□□□ 0.72
NME3-204ENST00000563498 KIF20AO95235 890 aa19.58■□□□□ 0.72
NME3-204ENST00000563498 F13A1P00488 732 aa19.58■□□□□ 0.72
NME3-204ENST00000563498 ZSCAN22P10073 491 aaPredicted RBP19.58■□□□□ 0.72
NME3-204ENST00000563498 CD58P19256 250 aa19.58■□□□□ 0.72
NME3-204ENST00000563498 COPAP53621 1224 aa19.58■□□□□ 0.72
NME3-204ENST00000563498 EFEMP1Q12805 493 aa19.58■□□□□ 0.72
NME3-204ENST00000563498 ZNF234Q14588 700 aa19.58■□□□□ 0.72
NME3-204ENST00000563498 PPP1R26Q5T8A7 1209 aaPredicted RBP19.58■□□□□ 0.72
NME3-204ENST00000563498 TTC39CQ8N584 583 aa19.58■□□□□ 0.72
NME3-204ENST00000563498 PNPLA1Q8N8W4 532 aa19.58■□□□□ 0.72
NME3-204ENST00000563498 CCDC150Q8NCX0 1101 aa19.58■□□□□ 0.72
NME3-204ENST00000563498 FAXDC2Q96IV6 333 aa19.58■□□□□ 0.72
NME3-204ENST00000563498 MIR1-1HGQ9H1L0 117 aa19.58■□□□□ 0.72
NME3-204ENST00000563498 USP25Q9UHP3 1055 aa19.58■□□□□ 0.72
NME3-204ENST00000563498 GPSM3Q9Y4H4 160 aa19.58■□□□□ 0.72
NME3-204ENST00000563498 CENPBP07199 599 aaPredicted RBP19.57■□□□□ 0.72
NME3-204ENST00000563498 C7P10643 843 aa19.57■□□□□ 0.72
NME3-204ENST00000563498 MATKP42679 507 aa19.57■□□□□ 0.72
NME3-204ENST00000563498 GCLMP48507 274 aa19.57■□□□□ 0.72
NME3-204ENST00000563498 PPP3CAQ08209 521 aa19.57■□□□□ 0.72
NME3-204ENST00000563498 FOXD4L6Q3SYB3 417 aaPredicted RBP19.57■□□□□ 0.72
NME3-204ENST00000563498 FOXD4L5Q5VV16 416 aaPredicted RBP19.57■□□□□ 0.72
NME3-204ENST00000563498 FOXD4L3Q6VB84 417 aaPredicted RBP19.57■□□□□ 0.72
NME3-204ENST00000563498 DBX2Q6ZNG2 339 aa19.57■□□□□ 0.72
NME3-204ENST00000563498 FAM217AQ8IXS0 508 aa19.57■□□□□ 0.72
NME3-204ENST00000563498 C1orf216Q8TAB5 229 aa19.57■□□□□ 0.72
NME3-204ENST00000563498 BAHD1Q8TBE0 780 aaPredicted RBP19.57■□□□□ 0.72
NME3-204ENST00000563498 FOXD4L4Q8WXT5 416 aaPredicted RBP19.57■□□□□ 0.72
NME3-204ENST00000563498 CCDC86Q9H6F5 360 aaKnown RBP19.57■□□□□ 0.72
NME3-204ENST00000563498 GAREM1Q9H706 876 aa19.57■□□□□ 0.72
NME3-204ENST00000563498 MARCH2Q9P0N8 246 aa19.57■□□□□ 0.72
NME3-204ENST00000563498 RCOR1Q9UKL0 485 aa19.57■□□□□ 0.72
NME3-204ENST00000563498 STRIP2Q9ULQ0 834 aa19.57■□□□□ 0.72
NME3-204ENST00000563498 PCDHGB2Q9Y5G2 931 aa19.57■□□□□ 0.72
NME3-204ENST00000563498 CKAP5Q14008 2032 aa19.57■□□□□ 0.72
NME3-204ENST00000563498 NBEAQ8NFP9 2946 aa19.57■□□□□ 0.72
NME3-204ENST00000563498 HMBSP08397 361 aa19.56■□□□□ 0.72
NME3-204ENST00000563498 TRIM49P0CI25 452 aa19.56■□□□□ 0.72
NME3-204ENST00000563498 TRIM49CP0CI26 452 aa19.56■□□□□ 0.72
NME3-204ENST00000563498 ACADMP11310 421 aa19.56■□□□□ 0.72
NME3-204ENST00000563498 NR2F2P24468 414 aa19.56■□□□□ 0.72
NME3-204ENST00000563498 PRKCHP24723 683 aa19.56■□□□□ 0.72
NME3-204ENST00000563498 MCCD1P59942 119 aaPredicted RBP19.56■□□□□ 0.72
NME3-204ENST00000563498 HLA-BQ31612 363 aa19.56■□□□□ 0.72
NME3-204ENST00000563498 RAB41Q5JT25 222 aa19.56■□□□□ 0.72
NME3-204ENST00000563498 SLCO6A1Q86UG4 719 aa19.56■□□□□ 0.72
NME3-204ENST00000563498 DENND1CQ8IV53 801 aa19.56■□□□□ 0.72
NME3-204ENST00000563498 SETD7Q8WTS6 366 aaKnown RBP19.56■□□□□ 0.72
NME3-204ENST00000563498 PLD4Q96BZ4 506 aa19.56■□□□□ 0.72
NME3-204ENST00000563498 IL21RQ9HBE5 538 aa19.56■□□□□ 0.72
NME3-204ENST00000563498 TM7SF3Q9NS93 570 aa19.56■□□□□ 0.72
NME3-204ENST00000563498 CLEC4EQ9ULY5 219 aa19.56■□□□□ 0.72
NME3-204ENST00000563498 FLRT2O43155 660 aa19.55■□□□□ 0.72
NME3-204ENST00000563498 EPHX1P07099 455 aa19.55■□□□□ 0.72
NME3-204ENST00000563498 KRT13P13646 458 aa19.55■□□□□ 0.72
NME3-204ENST00000563498 GTF2H1P32780 548 aa19.55■□□□□ 0.72
NME3-204ENST00000563498 BNC1Q01954 994 aa19.55■□□□□ 0.72
NME3-204ENST00000563498 PDE4CQ08493 712 aa19.55■□□□□ 0.72
NME3-204ENST00000563498 SERPINA13PQ6UXR4 307 aa19.55■□□□□ 0.72
NME3-204ENST00000563498 RSRC2Q7L4I2 434 aaKnown RBP19.55■□□□□ 0.72
NME3-204ENST00000563498 SPRYD3Q8NCJ5 442 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms