RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 PDCL3Q9H2J4 239 aa8.91□□□□□ -0.98
UBR1-204ENST00000563239 CHRDQ9H2X0 955 aa8.91□□□□□ -0.98
UBR1-204ENST00000563239 POPDC2Q9HBU9 364 aa8.91□□□□□ -0.98
UBR1-204ENST00000563239 C2orf42Q9NWW7 574 aa8.91□□□□□ -0.98
UBR1-204ENST00000563239 MARK1Q9P0L2 795 aa8.91□□□□□ -0.98
UBR1-204ENST00000563239 CALCOCO1Q9P1Z2 691 aa8.91□□□□□ -0.98
UBR1-204ENST00000563239 STOML2Q9UJZ1 356 aa8.91□□□□□ -0.98
UBR1-204ENST00000563239 TMEM59LQ9UK28 342 aa8.91□□□□□ -0.98
UBR1-204ENST00000563239 LSM7Q9UK45 103 aaKnown RBP8.91□□□□□ -0.98
UBR1-204ENST00000563239 CEP83Q9Y592 693 aa8.91□□□□□ -0.98
UBR1-204ENST00000563239 DMDP11532 3685 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 MIA3Q5JRA6 1907 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 A0A0A0MRY4 1105 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 GOLGA6L7A0A1B0GV03 622 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 A0A1W2PQJ5 194 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 K7EQS6 105 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 IRAK2O43187 625 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 HSF2BPO75031 334 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 DAB1O75553 588 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 TRUB2O95900 331 aaKnown RBP8.9□□□□□ -0.98
UBR1-204ENST00000563239 ADH1CP00326 375 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 PENKP01210 267 aaPredicted RBP8.9□□□□□ -0.98
UBR1-204ENST00000563239 GYPCP04921 128 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 CISD3P0C7P0 127 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 TDGF1P13385 188 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 TFE3P19532 575 aaPredicted RBP8.9□□□□□ -0.98
UBR1-204ENST00000563239 HOXC13P31276 330 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 SCNN1AP37088 669 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 EIF2DP41214 584 aaKnown RBP8.9□□□□□ -0.98
UBR1-204ENST00000563239 PRKCIP41743 596 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 TBX4P57082 545 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 CENPCQ03188 943 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 GAD2Q05329 585 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 NNTQ13423 1086 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 DCAF6Q58WW2 860 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 FAM133BQ5BKY9 247 aaKnown RBP8.9□□□□□ -0.98
UBR1-204ENST00000563239 DGKKQ5KSL6 1271 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 FYB2Q5VWT5 728 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 HGSNATQ68CP4 663 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 NADSYN1Q6IA69 706 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 TRIM72Q6ZMU5 477 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 MAMSTRQ6ZN01 415 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 MMS22LQ6ZRQ5 1243 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 TPGS1Q6ZTW0 290 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 ZNF571Q7Z3V5 609 aaPredicted RBP8.9□□□□□ -0.98
UBR1-204ENST00000563239 BNIPLQ7Z465 357 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 PHF13Q86YI8 300 aaPredicted RBP8.9□□□□□ -0.98
UBR1-204ENST00000563239 ZDHHC17Q8IUH5 632 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 C1orf210Q8IVY1 113 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 CPXM2Q8N436 756 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 NAT16Q8N8M0 369 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 IPO4Q8TEX9 1081 aaKnown RBP8.9□□□□□ -0.98
UBR1-204ENST00000563239 GOLGA1Q92805 767 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 CD101Q93033 1021 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 NT5C3BQ969T7 300 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 AZIN2Q96A70 460 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 MYEOVQ96EZ4 313 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 RBSNQ9H1K0 784 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 KCNH6Q9H252 994 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 TAS2R14Q9NYV8 317 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 XPO7Q9UIA9 1087 aaKnown RBP8.9□□□□□ -0.98
UBR1-204ENST00000563239 FBXO10Q9UK96 956 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 HCN2Q9UL51 889 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 CLEC4EQ9ULY5 219 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 CAPN11Q9UMQ6 739 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 TLR6Q9Y2C9 796 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 ZNF510Q9Y2H8 683 aa8.9□□□□□ -0.98
UBR1-204ENST00000563239 MYO15AQ9UKN7 3530 aa8.9□□□□□ -0.99
UBR1-204ENST00000563239 MYOFQ9NZM1 2061 aa8.9□□□□□ -0.99
UBR1-204ENST00000563239 KIAA1549LQ6ZVL6 1849 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 FRYLO94915 3013 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 ITIH6Q6UXX5 1313 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 TCRBV5S1A1TA0A578 114 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 KCNU1A8MYU2 1149 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 NEDD8-MDP1E9PL57 170 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 I6L893 689 aaPredicted RBP8.89□□□□□ -0.99
UBR1-204ENST00000563239 DDX3XO00571 662 aaKnown RBP eCLIP8.89□□□□□ -0.99
UBR1-204ENST00000563239 CAPN9O14815 690 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 NCAM2O15394 837 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 CACNG3O60359 315 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 TULP3O75386 442 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 GJB6O95452 261 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 LATS1O95835 1130 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 SKILP12757 684 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 TYRP14679 529 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 DRD1P21728 446 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 SLC6A4P31645 630 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 FLT3P36888 993 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 MATKP42679 507 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 MAGEA9P43362 315 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 HARS2P49590 506 aaKnown RBP8.89□□□□□ -0.99
UBR1-204ENST00000563239 MRE11P49959 708 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 SGSHP51688 502 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 SNX16P57768 344 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 AMPD2Q01433 879 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 GRSF1Q12849 480 aaKnown RBP eCLIP8.89□□□□□ -0.99
UBR1-204ENST00000563239 LRRC32Q14392 662 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 ANGPT1Q15389 498 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 ASIC2Q16515 512 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 ANO4Q32M45 955 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms