RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 TCP10L2B9ZVM9 353 aa5.37□□□□□ -1.55
SMG1-206ENST00000562668 SMIM22K7EJ46 135 aa5.37□□□□□ -1.55
SMG1-206ENST00000562668 ENTPD3O75355 529 aa5.37□□□□□ -1.55
SMG1-206ENST00000562668 ARIH2O95376 493 aa5.37□□□□□ -1.55
SMG1-206ENST00000562668 LDHCP07864 332 aa5.37□□□□□ -1.55
SMG1-206ENST00000562668 EBLN1P0CF75 366 aa5.37□□□□□ -1.55
SMG1-206ENST00000562668 NR2F6P10588 404 aa5.37□□□□□ -1.55
SMG1-206ENST00000562668 ITGALP20701 1170 aa5.37□□□□□ -1.55
SMG1-206ENST00000562668 PCSK6P29122 969 aa5.37□□□□□ -1.55
SMG1-206ENST00000562668 RBM5P52756 815 aaKnown RBP eCLIP5.37□□□□□ -1.55
SMG1-206ENST00000562668 SLC10A2Q12908 348 aaPredicted RBP5.37□□□□□ -1.55
SMG1-206ENST00000562668 HABP2Q14520 560 aaPredicted RBP5.37□□□□□ -1.55
SMG1-206ENST00000562668 KIAA1614Q5VZ46 1190 aa5.37□□□□□ -1.55
SMG1-206ENST00000562668 TAF2Q6P1X5 1199 aa5.37□□□□□ -1.55
SMG1-206ENST00000562668 MIGA1Q8NAN2 632 aa5.37□□□□□ -1.55
SMG1-206ENST00000562668 C3orf20Q8ND61 904 aa5.37□□□□□ -1.55
SMG1-206ENST00000562668 FAM151AQ8WW52 585 aa5.37□□□□□ -1.55
SMG1-206ENST00000562668 DDB2Q92466 427 aa5.37□□□□□ -1.55
SMG1-206ENST00000562668 DCPSQ96C86 337 aaKnown RBP5.37□□□□□ -1.55
SMG1-206ENST00000562668 EVI5LQ96CN4 794 aa5.37□□□□□ -1.55
SMG1-206ENST00000562668 GPATCH3Q96I76 525 aa5.37□□□□□ -1.55
SMG1-206ENST00000562668 STRBPQ96SI9 672 aaKnown RBP5.37□□□□□ -1.55
SMG1-206ENST00000562668 SLC29A3Q9BZD2 475 aa5.37□□□□□ -1.55
SMG1-206ENST00000562668 TINAGL1Q9GZM7 467 aaPredicted RBP5.37□□□□□ -1.55
SMG1-206ENST00000562668 TMEM39BQ9GZU3 492 aa5.37□□□□□ -1.55
SMG1-206ENST00000562668 SIK2Q9H0K1 926 aa5.37□□□□□ -1.55
SMG1-206ENST00000562668 SLAMF7Q9NQ25 335 aa5.37□□□□□ -1.55
SMG1-206ENST00000562668 MRPS18AQ9NVS2 196 aaKnown RBP5.37□□□□□ -1.55
SMG1-206ENST00000562668 AATFQ9NY61 560 aaKnown RBP eCLIP5.37□□□□□ -1.55
SMG1-206ENST00000562668 EHD3Q9NZN3 535 aa5.37□□□□□ -1.55
SMG1-206ENST00000562668 PADI4Q9UM07 663 aa5.37□□□□□ -1.55
SMG1-206ENST00000562668 POLHQ9Y253 713 aa5.37□□□□□ -1.55
SMG1-206ENST00000562668 FLT1P17948 1338 aa5.37□□□□□ -1.55
SMG1-206ENST00000562668 LAMA4Q16363 1823 aa5.37□□□□□ -1.55
SMG1-206ENST00000562668 A0A0D9SFI3 127 aa5.36□□□□□ -1.55
SMG1-206ENST00000562668 PRKAB2O43741 272 aa5.36□□□□□ -1.55
SMG1-206ENST00000562668 DTNBO60941 627 aa5.36□□□□□ -1.55
SMG1-206ENST00000562668 ZRANB2O95218 330 aaKnown RBP eCLIP5.36□□□□□ -1.55
SMG1-206ENST00000562668 MBD4O95243 580 aa5.36□□□□□ -1.55
SMG1-206ENST00000562668 CELA2AP08217 269 aa5.36□□□□□ -1.55
SMG1-206ENST00000562668 HSPA6P17066 643 aa5.36□□□□□ -1.55
SMG1-206ENST00000562668 CHRM3P20309 590 aa5.36□□□□□ -1.55
SMG1-206ENST00000562668 CD6P30203 668 aa5.36□□□□□ -1.55
SMG1-206ENST00000562668 CCT8P50990 548 aa5.36□□□□□ -1.55
SMG1-206ENST00000562668 ZNF81P51508 661 aa5.36□□□□□ -1.55
SMG1-206ENST00000562668 TCF15Q12870 199 aa5.36□□□□□ -1.55
SMG1-206ENST00000562668 KIF22Q14807 665 aa5.36□□□□□ -1.55
SMG1-206ENST00000562668 ODF1Q14990 250 aa5.36□□□□□ -1.55
SMG1-206ENST00000562668 PTPN21Q16825 1174 aa5.36□□□□□ -1.55
SMG1-206ENST00000562668 RBM20Q5T481 1227 aaKnown RBP5.36□□□□□ -1.55
SMG1-206ENST00000562668 SUMO4Q6EEV6 95 aa5.36□□□□□ -1.55
SMG1-206ENST00000562668 MOB2Q70IA6 237 aa5.36□□□□□ -1.55
SMG1-206ENST00000562668 FAM90A1Q86YD7 464 aa5.36□□□□□ -1.55
SMG1-206ENST00000562668 MIER2Q8N344 545 aa5.36□□□□□ -1.55
SMG1-206ENST00000562668 PRPF38AQ8NAV1 312 aaKnown RBP5.36□□□□□ -1.55
SMG1-206ENST00000562668 SCARB1Q8WTV0 552 aa5.36□□□□□ -1.55
SMG1-206ENST00000562668 FAM227BQ96M60 508 aa5.36□□□□□ -1.55
SMG1-206ENST00000562668 FSD1Q9BTV5 496 aa5.36□□□□□ -1.55
SMG1-206ENST00000562668 C1orf43Q9BWL3 253 aa5.36□□□□□ -1.55
SMG1-206ENST00000562668 OSBPL5Q9H0X9 879 aaPredicted RBP5.36□□□□□ -1.55
SMG1-206ENST00000562668 WDCPQ9H6R7 721 aa5.36□□□□□ -1.55
SMG1-206ENST00000562668 DNAJC18Q9H819 358 aa5.36□□□□□ -1.55
SMG1-206ENST00000562668 ARMT1Q9H993 441 aa5.36□□□□□ -1.55
SMG1-206ENST00000562668 VEZTQ9HBM0 779 aa5.36□□□□□ -1.55
SMG1-206ENST00000562668 FEZ2Q9UHY8 353 aaPredicted RBP5.36□□□□□ -1.55
SMG1-206ENST00000562668 ZNF112Q9UJU3 913 aa5.36□□□□□ -1.55
SMG1-206ENST00000562668 DOCK1Q14185 1865 aa5.36□□□□□ -1.55
SMG1-206ENST00000562668 PTPRFP10586 1907 aa5.35□□□□□ -1.55
SMG1-206ENST00000562668 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.35□□□□□ -1.55
SMG1-206ENST00000562668 PRSS29PA6NIE9 313 aa5.35□□□□□ -1.55
SMG1-206ENST00000562668 ALG1L2C9J202 215 aa5.35□□□□□ -1.55
SMG1-206ENST00000562668 GPAA1O43292 621 aa5.35□□□□□ -1.55
SMG1-206ENST00000562668 NXPH3O95157 252 aa5.35□□□□□ -1.55
SMG1-206ENST00000562668 CELF2O95319 508 aaKnown RBP5.35□□□□□ -1.55
SMG1-206ENST00000562668 BAG3O95817 575 aa5.35□□□□□ -1.55
SMG1-206ENST00000562668 ERBB2P04626 1255 aa5.35□□□□□ -1.55
SMG1-206ENST00000562668 ZFYP08048 801 aaPredicted RBP5.35□□□□□ -1.55
SMG1-206ENST00000562668 ZFXP17010 805 aaPredicted RBP5.35□□□□□ -1.55
SMG1-206ENST00000562668 CHMLP26374 656 aa5.35□□□□□ -1.55
SMG1-206ENST00000562668 PLCD1P51178 756 aa5.35□□□□□ -1.55
SMG1-206ENST00000562668 GABPAQ06546 454 aa5.35□□□□□ -1.55
SMG1-206ENST00000562668 TCP10Q12799 353 aa5.35□□□□□ -1.55
SMG1-206ENST00000562668 NOGQ13253 232 aa5.35□□□□□ -1.55
SMG1-206ENST00000562668 PICALMQ13492 652 aa5.35□□□□□ -1.55
SMG1-206ENST00000562668 TNFAIP1Q13829 316 aa5.35□□□□□ -1.55
SMG1-206ENST00000562668 LLGL1Q15334 1064 aa5.35□□□□□ -1.55
SMG1-206ENST00000562668 BMP2KLQ5H9B9 411 aa5.35□□□□□ -1.55
SMG1-206ENST00000562668 PLAC9Q5JTB6 97 aa5.35□□□□□ -1.55
SMG1-206ENST00000562668 TEDDM1Q5T9Z0 273 aa5.35□□□□□ -1.55
SMG1-206ENST00000562668 THEMIS2Q5TEJ8 643 aa5.35□□□□□ -1.55
SMG1-206ENST00000562668 VPS53Q5VIR6 699 aa5.35□□□□□ -1.55
SMG1-206ENST00000562668 ZSCAN25Q6NSZ9 544 aa5.35□□□□□ -1.55
SMG1-206ENST00000562668 CCDC129Q6ZRS4 1044 aa5.35□□□□□ -1.55
SMG1-206ENST00000562668 PPP1R32Q7Z5V6 425 aa5.35□□□□□ -1.55
SMG1-206ENST00000562668 ZNF589Q86UQ0 364 aaPredicted RBP5.35□□□□□ -1.55
SMG1-206ENST00000562668 TEX11Q8IYF3 940 aa5.35□□□□□ -1.55
SMG1-206ENST00000562668 FAM109AQ8N4B1 249 aa5.35□□□□□ -1.55
SMG1-206ENST00000562668 DNAJC5GQ8N7S2 189 aa5.35□□□□□ -1.55
SMG1-206ENST00000562668 SDR42E1Q8WUS8 393 aa5.35□□□□□ -1.55
SMG1-206ENST00000562668 RGMAQ96B86 450 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms