RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 SLC39A13Q96H72 371 aa17.42■□□□□ 0.38
CLK3-207ENST00000562389 C11orf70Q9BRQ4 267 aa17.42■□□□□ 0.38
CLK3-207ENST00000562389 ANP32EQ9BTT0 268 aa17.42■□□□□ 0.38
CLK3-207ENST00000562389 MARK1Q9P0L2 795 aa17.42■□□□□ 0.38
CLK3-207ENST00000562389 WDR35Q9P2L0 1181 aa17.42■□□□□ 0.38
CLK3-207ENST00000562389 STOML2Q9UJZ1 356 aa17.42■□□□□ 0.38
CLK3-207ENST00000562389 ZDBF2Q9HCK1 2354 aa17.42■□□□□ 0.38
CLK3-207ENST00000562389 FAM170AA1A519 330 aa17.41■□□□□ 0.38
CLK3-207ENST00000562389 AP5Z1O43299 807 aa17.41■□□□□ 0.38
CLK3-207ENST00000562389 CALB1P05937 261 aa17.41■□□□□ 0.38
CLK3-207ENST00000562389 DCNP07585 359 aaKnown RBP17.41■□□□□ 0.38
CLK3-207ENST00000562389 CASP14P31944 242 aa17.41■□□□□ 0.38
CLK3-207ENST00000562389 CHKAP35790 457 aa17.41■□□□□ 0.38
CLK3-207ENST00000562389 OPRD1P41143 372 aa17.41■□□□□ 0.38
CLK3-207ENST00000562389 EIF2DP41214 584 aaKnown RBP17.41■□□□□ 0.38
CLK3-207ENST00000562389 MATKP42679 507 aa17.41■□□□□ 0.38
CLK3-207ENST00000562389 RPS9P46781 194 aaKnown RBP17.41■□□□□ 0.38
CLK3-207ENST00000562389 CDK17Q00537 523 aa17.41■□□□□ 0.38
CLK3-207ENST00000562389 EIF4EBP2Q13542 120 aaPredicted RBP17.41■□□□□ 0.38
CLK3-207ENST00000562389 HGSNATQ68CP4 663 aa17.41■□□□□ 0.38
CLK3-207ENST00000562389 MON1BQ7L1V2 547 aa17.41■□□□□ 0.38
CLK3-207ENST00000562389 ARCQ7LC44 396 aa17.41■□□□□ 0.38
CLK3-207ENST00000562389 ZNF571Q7Z3V5 609 aaPredicted RBP17.41■□□□□ 0.38
CLK3-207ENST00000562389 ADAM32Q8TC27 787 aa17.41■□□□□ 0.38
CLK3-207ENST00000562389 CD101Q93033 1021 aa17.41■□□□□ 0.38
CLK3-207ENST00000562389 FCRL2Q96LA5 508 aaPredicted RBP17.41■□□□□ 0.38
CLK3-207ENST00000562389 P2RY13Q9BPV8 354 aa17.41■□□□□ 0.38
CLK3-207ENST00000562389 RRN3Q9NYV6 651 aa17.41■□□□□ 0.38
CLK3-207ENST00000562389 ADAM22Q9P0K1 906 aa17.41■□□□□ 0.38
CLK3-207ENST00000562389 BZW2Q9Y6E2 419 aaKnown RBP17.41■□□□□ 0.38
CLK3-207ENST00000562389 GOLGA8SH3BPF8 625 aa17.4■□□□□ 0.38
CLK3-207ENST00000562389 CHRNB1P11230 501 aa17.4■□□□□ 0.38
CLK3-207ENST00000562389 GBP1P32455 592 aa17.4■□□□□ 0.38
CLK3-207ENST00000562389 PITX1P78337 314 aaPredicted RBP17.4■□□□□ 0.38
CLK3-207ENST00000562389 C1QBPQ07021 282 aaKnown RBP17.4■□□□□ 0.38
CLK3-207ENST00000562389 GRSF1Q12849 480 aaKnown RBP eCLIP17.4■□□□□ 0.38
CLK3-207ENST00000562389 CCINQ13939 588 aa17.4■□□□□ 0.38
CLK3-207ENST00000562389 LRRC32Q14392 662 aa17.4■□□□□ 0.38
CLK3-207ENST00000562389 DGKKQ5KSL6 1271 aa17.4■□□□□ 0.38
CLK3-207ENST00000562389 NAIF1Q69YI7 327 aaPredicted RBP17.4■□□□□ 0.38
CLK3-207ENST00000562389 ACAD10Q6JQN1 1059 aa17.4■□□□□ 0.38
CLK3-207ENST00000562389 TMEM25Q86YD3 366 aa17.4■□□□□ 0.38
CLK3-207ENST00000562389 AZIN2Q96A70 460 aa17.4■□□□□ 0.38
CLK3-207ENST00000562389 TRIM5Q9C035 493 aa17.4■□□□□ 0.38
CLK3-207ENST00000562389 FAM204AQ9H8W3 233 aa17.4■□□□□ 0.38
CLK3-207ENST00000562389 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.4■□□□□ 0.38
CLK3-207ENST00000562389 TMEM59LQ9UK28 342 aa17.4■□□□□ 0.38
CLK3-207ENST00000562389 STAP1Q9ULZ2 295 aa17.4■□□□□ 0.38
CLK3-207ENST00000562389 SERPING1P05155 500 aa17.39■□□□□ 0.37
CLK3-207ENST00000562389 GZMAP12544 262 aa17.39■□□□□ 0.37
CLK3-207ENST00000562389 SKILP12757 684 aa17.39■□□□□ 0.37
CLK3-207ENST00000562389 DRD1P21728 446 aa17.39■□□□□ 0.37
CLK3-207ENST00000562389 HNRNPH3P31942 346 aaKnown RBP17.39■□□□□ 0.37
CLK3-207ENST00000562389 GALK1P51570 392 aa17.39■□□□□ 0.37
CLK3-207ENST00000562389 ARID5BQ14865 1188 aa17.39■□□□□ 0.37
CLK3-207ENST00000562389 ANO4Q32M45 955 aa17.39■□□□□ 0.37
CLK3-207ENST00000562389 TDRD12Q587J7 1177 aaKnown RBP17.39■□□□□ 0.37
CLK3-207ENST00000562389 FSTL4Q6MZW2 842 aa17.39■□□□□ 0.37
CLK3-207ENST00000562389 TPGS1Q6ZTW0 290 aa17.39■□□□□ 0.37
CLK3-207ENST00000562389 C12orf40Q86WS4 652 aa17.39■□□□□ 0.37
CLK3-207ENST00000562389 ETFBKMTQ8IXQ9 262 aa17.39■□□□□ 0.37
CLK3-207ENST00000562389 SYNPOQ8N3V7 929 aa17.39■□□□□ 0.37
CLK3-207ENST00000562389 NT5C3BQ969T7 300 aa17.39■□□□□ 0.37
CLK3-207ENST00000562389 NPY6RQ99463 290 aa17.39■□□□□ 0.37
CLK3-207ENST00000562389 IER2Q9BTL4 223 aa17.39■□□□□ 0.37
CLK3-207ENST00000562389 BBS2Q9BXC9 721 aa17.39■□□□□ 0.37
CLK3-207ENST00000562389 LMAN1LQ9HAT1 526 aa17.39■□□□□ 0.37
CLK3-207ENST00000562389 METTL5Q9NRN9 209 aaKnown RBP17.39■□□□□ 0.37
CLK3-207ENST00000562389 TMEM51Q9NW97 253 aa17.39■□□□□ 0.37
CLK3-207ENST00000562389 DDIT4Q9NX09 232 aa17.39■□□□□ 0.37
CLK3-207ENST00000562389 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.38■□□□□ 0.37
CLK3-207ENST00000562389 NEDD8-MDP1E9PL57 170 aa17.38■□□□□ 0.37
CLK3-207ENST00000562389 GFRA2O00451 464 aa17.38■□□□□ 0.37
CLK3-207ENST00000562389 DDX3XO00571 662 aaKnown RBP eCLIP17.38■□□□□ 0.37
CLK3-207ENST00000562389 CACNG3O60359 315 aa17.38■□□□□ 0.37
CLK3-207ENST00000562389 ACSL4O60488 711 aa17.38■□□□□ 0.37
CLK3-207ENST00000562389 PENKP01210 267 aaPredicted RBP17.38■□□□□ 0.37
CLK3-207ENST00000562389 APOEP02649 317 aa17.38■□□□□ 0.37
CLK3-207ENST00000562389 TPM1P09493 284 aa17.38■□□□□ 0.37
CLK3-207ENST00000562389 FLT3P36888 993 aa17.38■□□□□ 0.37
CLK3-207ENST00000562389 SLC11A2P49281 568 aa17.38■□□□□ 0.37
CLK3-207ENST00000562389 RNASE9P60153 205 aaKnown RBP17.38■□□□□ 0.37
CLK3-207ENST00000562389 ADGRF1Q5T601 910 aa17.38■□□□□ 0.37
CLK3-207ENST00000562389 OTUD1Q5VV17 481 aaPredicted RBP17.38■□□□□ 0.37
CLK3-207ENST00000562389 MCOLN2Q8IZK6 566 aa17.38■□□□□ 0.37
CLK3-207ENST00000562389 DTWD2Q8NBA8 298 aa17.38■□□□□ 0.37
CLK3-207ENST00000562389 C3orf20Q8ND61 904 aa17.38■□□□□ 0.37
CLK3-207ENST00000562389 PGAP3Q96FM1 320 aaPredicted RBP17.38■□□□□ 0.37
CLK3-207ENST00000562389 VCPIP1Q96JH7 1222 aa17.38■□□□□ 0.37
CLK3-207ENST00000562389 IRX2Q9BZI1 471 aaPredicted RBP17.38■□□□□ 0.37
CLK3-207ENST00000562389 KCNH6Q9H252 994 aa17.38■□□□□ 0.37
CLK3-207ENST00000562389 CHRDQ9H2X0 955 aa17.38■□□□□ 0.37
CLK3-207ENST00000562389 FBRSL1Q9HCM7 1045 aaKnown RBP17.38■□□□□ 0.37
CLK3-207ENST00000562389 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.38■□□□□ 0.37
CLK3-207ENST00000562389 TAS2R14Q9NYV8 317 aa17.38■□□□□ 0.37
CLK3-207ENST00000562389 TCRBV5S1A1TA0A578 114 aa17.37■□□□□ 0.37
CLK3-207ENST00000562389 M0QYT0 321 aa17.37■□□□□ 0.37
CLK3-207ENST00000562389 EGFP01133 1207 aa17.37■□□□□ 0.37
CLK3-207ENST00000562389 SLC2A3P11169 496 aa17.37■□□□□ 0.37
CLK3-207ENST00000562389 TYRP14679 529 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms