RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 TAS1R2Q8TE23 839 aa12.42□□□□□ -0.42
CARMIL3-204ENST00000561354 FAXDC2Q96IV6 333 aa12.42□□□□□ -0.42
CARMIL3-204ENST00000561354 PIWIL1Q96J94 861 aaKnown RBP12.42□□□□□ -0.42
CARMIL3-204ENST00000561354 GPR174Q9BXC1 333 aa12.42□□□□□ -0.42
CARMIL3-204ENST00000561354 SLC2A11Q9BYW1 496 aa12.42□□□□□ -0.42
CARMIL3-204ENST00000561354 UBXN6Q9BZV1 441 aa12.42□□□□□ -0.42
CARMIL3-204ENST00000561354 NIF3L1Q9GZT8 377 aa12.42□□□□□ -0.42
CARMIL3-204ENST00000561354 APOBEC3GQ9HC16 384 aaKnown RBP12.42□□□□□ -0.42
CARMIL3-204ENST00000561354 USP25Q9UHP3 1055 aa12.42□□□□□ -0.42
CARMIL3-204ENST00000561354 RCOR1Q9UKL0 485 aa12.42□□□□□ -0.42
CARMIL3-204ENST00000561354 CFAP45Q9UL16 551 aa12.42□□□□□ -0.42
CARMIL3-204ENST00000561354 METTL12A8MUP2 240 aa12.41□□□□□ -0.42
CARMIL3-204ENST00000561354 KCNJ18B7U540 433 aa12.41□□□□□ -0.42
CARMIL3-204ENST00000561354 TIMM44O43615 452 aa12.41□□□□□ -0.42
CARMIL3-204ENST00000561354 SYNCRIPO60506 623 aaKnown RBP12.41□□□□□ -0.42
CARMIL3-204ENST00000561354 CBFA2T3O75081 653 aa12.41□□□□□ -0.42
CARMIL3-204ENST00000561354 KIF20AO95235 890 aa12.41□□□□□ -0.42
CARMIL3-204ENST00000561354 CYBBP04839 570 aa12.41□□□□□ -0.42
CARMIL3-204ENST00000561354 CORO1AP31146 461 aaKnown RBP12.41□□□□□ -0.42
CARMIL3-204ENST00000561354 GCLMP48507 274 aa12.41□□□□□ -0.42
CARMIL3-204ENST00000561354 MCCD1P59942 119 aaPredicted RBP12.41□□□□□ -0.42
CARMIL3-204ENST00000561354 PPP3CAQ08209 521 aa12.41□□□□□ -0.42
CARMIL3-204ENST00000561354 SCAPQ12770 1279 aa12.41□□□□□ -0.42
CARMIL3-204ENST00000561354 FOXD4L6Q3SYB3 417 aaPredicted RBP12.41□□□□□ -0.42
CARMIL3-204ENST00000561354 PPP1R26Q5T8A7 1209 aaPredicted RBP12.41□□□□□ -0.42
CARMIL3-204ENST00000561354 FOXD4L5Q5VV16 416 aaPredicted RBP12.41□□□□□ -0.42
CARMIL3-204ENST00000561354 IL27RAQ6UWB1 636 aa12.41□□□□□ -0.42
CARMIL3-204ENST00000561354 FOXD4L3Q6VB84 417 aaPredicted RBP12.41□□□□□ -0.42
CARMIL3-204ENST00000561354 CCNI2Q6ZMN8 369 aaPredicted RBP12.41□□□□□ -0.42
CARMIL3-204ENST00000561354 ANKS1BQ7Z6G8 1248 aa12.41□□□□□ -0.42
CARMIL3-204ENST00000561354 ARHGAP18Q8N392 663 aa12.41□□□□□ -0.42
CARMIL3-204ENST00000561354 TTC39CQ8N584 583 aa12.41□□□□□ -0.42
CARMIL3-204ENST00000561354 RBBP8NLQ8NC74 664 aaPredicted RBP12.41□□□□□ -0.42
CARMIL3-204ENST00000561354 CCDC150Q8NCX0 1101 aa12.41□□□□□ -0.42
CARMIL3-204ENST00000561354 FOXD4L4Q8WXT5 416 aaPredicted RBP12.41□□□□□ -0.42
CARMIL3-204ENST00000561354 PRCCQ92733 491 aaPredicted RBP12.41□□□□□ -0.42
CARMIL3-204ENST00000561354 SIPA1Q96FS4 1042 aa12.41□□□□□ -0.42
CARMIL3-204ENST00000561354 NUP58Q9BVL2 599 aa12.41□□□□□ -0.42
CARMIL3-204ENST00000561354 PCED1AQ9H1Q7 454 aa12.41□□□□□ -0.42
CARMIL3-204ENST00000561354 ELOVL2Q9NXB9 296 aa12.41□□□□□ -0.42
CARMIL3-204ENST00000561354 KIAA1522Q9P206 1035 aaPredicted RBP12.41□□□□□ -0.42
CARMIL3-204ENST00000561354 RASAL2Q9UJF2 1139 aa12.41□□□□□ -0.42
CARMIL3-204ENST00000561354 PCOLCE2Q9UKZ9 415 aa12.41□□□□□ -0.42
CARMIL3-204ENST00000561354 AGO1Q9UL18 857 aaKnown RBP12.41□□□□□ -0.42
CARMIL3-204ENST00000561354 APOBEC2Q9Y235 224 aaKnown RBP12.41□□□□□ -0.42
CARMIL3-204ENST00000561354 BCAT2O15382 392 aaPredicted RBP12.4□□□□□ -0.42
CARMIL3-204ENST00000561354 C7P10643 843 aa12.4□□□□□ -0.42
CARMIL3-204ENST00000561354 CD58P19256 250 aa12.4□□□□□ -0.42
CARMIL3-204ENST00000561354 NR2F2P24468 414 aa12.4□□□□□ -0.42
CARMIL3-204ENST00000561354 COPAP53621 1224 aa12.4□□□□□ -0.42
CARMIL3-204ENST00000561354 EFEMP1Q12805 493 aa12.4□□□□□ -0.42
CARMIL3-204ENST00000561354 ZNF234Q14588 700 aa12.4□□□□□ -0.42
CARMIL3-204ENST00000561354 RAB41Q5JT25 222 aa12.4□□□□□ -0.42
CARMIL3-204ENST00000561354 DCAF12L1Q5VU92 463 aa12.4□□□□□ -0.42
CARMIL3-204ENST00000561354 DBX2Q6ZNG2 339 aa12.4□□□□□ -0.42
CARMIL3-204ENST00000561354 DENND1CQ8IV53 801 aa12.4□□□□□ -0.42
CARMIL3-204ENST00000561354 FAM217AQ8IXS0 508 aa12.4□□□□□ -0.42
CARMIL3-204ENST00000561354 ZCCHC9Q8N567 271 aaKnown RBP12.4□□□□□ -0.42
CARMIL3-204ENST00000561354 HEXIM2Q96MH2 286 aaKnown RBP12.4□□□□□ -0.42
CARMIL3-204ENST00000561354 MARCH2Q9P0N8 246 aa12.4□□□□□ -0.42
CARMIL3-204ENST00000561354 STRIP2Q9ULQ0 834 aa12.4□□□□□ -0.42
CARMIL3-204ENST00000561354 PKD1L2Q7Z442 2459 aa12.4□□□□□ -0.42
CARMIL3-204ENST00000561354 CER1O95813 267 aa12.39□□□□□ -0.43
CARMIL3-204ENST00000561354 HMBSP08397 361 aa12.39□□□□□ -0.43
CARMIL3-204ENST00000561354 TRIM49P0CI25 452 aa12.39□□□□□ -0.43
CARMIL3-204ENST00000561354 TRIM49CP0CI26 452 aa12.39□□□□□ -0.43
CARMIL3-204ENST00000561354 ACADMP11310 421 aa12.39□□□□□ -0.43
CARMIL3-204ENST00000561354 KRT13P13646 458 aa12.39□□□□□ -0.43
CARMIL3-204ENST00000561354 CMA1P23946 247 aa12.39□□□□□ -0.43
CARMIL3-204ENST00000561354 RPL13P26373 211 aaKnown RBP12.39□□□□□ -0.43
CARMIL3-204ENST00000561354 GTF2H1P32780 548 aa12.39□□□□□ -0.43
CARMIL3-204ENST00000561354 PSMC2P35998 433 aaKnown RBP12.39□□□□□ -0.43
CARMIL3-204ENST00000561354 MATKP42679 507 aa12.39□□□□□ -0.43
CARMIL3-204ENST00000561354 ACAP1Q15027 740 aa12.39□□□□□ -0.43
CARMIL3-204ENST00000561354 ARHGAP17Q68EM7 881 aa12.39□□□□□ -0.43
CARMIL3-204ENST00000561354 SLCO6A1Q86UG4 719 aa12.39□□□□□ -0.43
CARMIL3-204ENST00000561354 PIGZQ86VD9 579 aa12.39□□□□□ -0.43
CARMIL3-204ENST00000561354 PNPLA1Q8N8W4 532 aa12.39□□□□□ -0.43
CARMIL3-204ENST00000561354 C1orf216Q8TAB5 229 aa12.39□□□□□ -0.43
CARMIL3-204ENST00000561354 BAHD1Q8TBE0 780 aaPredicted RBP12.39□□□□□ -0.43
CARMIL3-204ENST00000561354 PLD4Q96BZ4 506 aa12.39□□□□□ -0.43
CARMIL3-204ENST00000561354 MIR1-1HGQ9H1L0 117 aa12.39□□□□□ -0.43
CARMIL3-204ENST00000561354 GAREM1Q9H706 876 aa12.39□□□□□ -0.43
CARMIL3-204ENST00000561354 TMEM8AQ9HCN3 771 aa12.39□□□□□ -0.43
CARMIL3-204ENST00000561354 TM7SF3Q9NS93 570 aa12.39□□□□□ -0.43
CARMIL3-204ENST00000561354 CLEC4EQ9ULY5 219 aa12.39□□□□□ -0.43
CARMIL3-204ENST00000561354 GPSM3Q9Y4H4 160 aa12.39□□□□□ -0.43
CARMIL3-204ENST00000561354 PCDHGB2Q9Y5G2 931 aa12.39□□□□□ -0.43
CARMIL3-204ENST00000561354 ATRXP46100 2492 aa12.39□□□□□ -0.43
CARMIL3-204ENST00000561354 ASPMQ8IZT6 3477 aa12.39□□□□□ -0.43
CARMIL3-204ENST00000561354 CKAP5Q14008 2032 aa12.38□□□□□ -0.43
CARMIL3-204ENST00000561354 AKAP13Q12802 2813 aa12.38□□□□□ -0.43
CARMIL3-204ENST00000561354 SLC12A8A0AV02 714 aa12.38□□□□□ -0.43
CARMIL3-204ENST00000561354 RHOBTB3O94955 611 aa12.38□□□□□ -0.43
CARMIL3-204ENST00000561354 EPHX1P07099 455 aa12.38□□□□□ -0.43
CARMIL3-204ENST00000561354 PFKFB1P16118 471 aa12.38□□□□□ -0.43
CARMIL3-204ENST00000561354 PRKCHP24723 683 aa12.38□□□□□ -0.43
CARMIL3-204ENST00000561354 RAD23BP54727 409 aa12.38□□□□□ -0.43
CARMIL3-204ENST00000561354 ZNF445P59923 1031 aa12.38□□□□□ -0.43
CARMIL3-204ENST00000561354 YWHAGP61981 247 aaKnown RBP eCLIP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms