RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 COL16A1Q07092 1604 aaPredicted RBP17.01■□□□□ 0.31
TPM1-228ENST00000560975 STT3AP46977 705 aa17.01■□□□□ 0.31
TPM1-228ENST00000560975 CDH6P55285 790 aa17.01■□□□□ 0.31
TPM1-228ENST00000560975 PKNOX1P55347 436 aa17.01■□□□□ 0.31
TPM1-228ENST00000560975 CLDN10P78369 228 aa17.01■□□□□ 0.31
TPM1-228ENST00000560975 TAP1Q03518 808 aa17.01■□□□□ 0.31
TPM1-228ENST00000560975 RAB6CQ53S08 254 aa17.01■□□□□ 0.31
TPM1-228ENST00000560975 RNF168Q8IYW5 571 aaPredicted RBP17.01■□□□□ 0.31
TPM1-228ENST00000560975 NUP93Q8N1F7 819 aa17.01■□□□□ 0.31
TPM1-228ENST00000560975 USP13Q92995 863 aaPredicted RBP17.01■□□□□ 0.31
TPM1-228ENST00000560975 NLRP4Q96MN2 994 aa17.01■□□□□ 0.31
TPM1-228ENST00000560975 SORT1Q99523 831 aa17.01■□□□□ 0.31
TPM1-228ENST00000560975 OXCT2Q9BYC2 517 aaPredicted RBP17.01■□□□□ 0.31
TPM1-228ENST00000560975 IMPG2Q9BZV3 1241 aa17.01■□□□□ 0.31
TPM1-228ENST00000560975 RAB6CQ9H0N0 254 aa17.01■□□□□ 0.31
TPM1-228ENST00000560975 POLR3FQ9H1D9 316 aaPredicted RBP17.01■□□□□ 0.31
TPM1-228ENST00000560975 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.01■□□□□ 0.31
TPM1-228ENST00000560975 CNTN6Q9UQ52 1028 aa17.01■□□□□ 0.31
TPM1-228ENST00000560975 RBL1P28749 1068 aa17■□□□□ 0.31
TPM1-228ENST00000560975 ADORA2AP29274 412 aa17■□□□□ 0.31
TPM1-228ENST00000560975 ZNF132P52740 706 aa17■□□□□ 0.31
TPM1-228ENST00000560975 NR1H2P55055 460 aa17■□□□□ 0.31
TPM1-228ENST00000560975 ORC1Q13415 861 aa17■□□□□ 0.31
TPM1-228ENST00000560975 FLOT2Q14254 428 aa17■□□□□ 0.31
TPM1-228ENST00000560975 C1QTNF12Q5T7M4 302 aa17■□□□□ 0.31
TPM1-228ENST00000560975 LILRA2Q8N149 483 aa17■□□□□ 0.31
TPM1-228ENST00000560975 MASTLQ96GX5 879 aa17■□□□□ 0.31
TPM1-228ENST00000560975 CISHQ9NSE2 258 aa17■□□□□ 0.31
TPM1-228ENST00000560975 MKS1Q9NXB0 559 aa17■□□□□ 0.31
TPM1-228ENST00000560975 ZNF232Q9UNY5 417 aa17■□□□□ 0.31
TPM1-228ENST00000560975 SSX2IPQ9Y2D8 614 aa17■□□□□ 0.31
TPM1-228ENST00000560975 TRDMT1O14717 391 aaKnown RBP17■□□□□ 0.31
TPM1-228ENST00000560975 XRCC1P18887 633 aaPredicted RBP17■□□□□ 0.31
TPM1-228ENST00000560975 GABRB2P47870 512 aa17■□□□□ 0.31
TPM1-228ENST00000560975 ADGRE1Q14246 886 aa17■□□□□ 0.31
TPM1-228ENST00000560975 PPM1LQ5SGD2 360 aa17■□□□□ 0.31
TPM1-228ENST00000560975 SH3PXD2AQ5TCZ1 1133 aa17■□□□□ 0.31
TPM1-228ENST00000560975 WDR78Q5VTH9 848 aa17■□□□□ 0.31
TPM1-228ENST00000560975 TRIML2Q8N7C3 387 aa17■□□□□ 0.31
TPM1-228ENST00000560975 TRAF3IP1Q8TDR0 691 aaPredicted RBP17■□□□□ 0.31
TPM1-228ENST00000560975 IRGQQ8WZA9 623 aa17■□□□□ 0.31
TPM1-228ENST00000560975 PGBD4Q96DM1 585 aa17■□□□□ 0.31
TPM1-228ENST00000560975 ZNF512Q96ME7 567 aaPredicted RBP17■□□□□ 0.31
TPM1-228ENST00000560975 LENG8Q96PV6 779 aaPredicted RBP17■□□□□ 0.31
TPM1-228ENST00000560975 TAAR1Q96RJ0 339 aa17■□□□□ 0.31
TPM1-228ENST00000560975 MSTO1Q9BUK6 570 aa17■□□□□ 0.31
TPM1-228ENST00000560975 STAU2Q9NUL3 570 aaKnown RBP eCLIP17■□□□□ 0.31
TPM1-228ENST00000560975 SEPT9Q9UHD8 586 aaPredicted RBP17■□□□□ 0.31
TPM1-228ENST00000560975 CYTH4Q9UIA0 394 aa17■□□□□ 0.31
TPM1-228ENST00000560975 SH3GLB1Q9Y371 365 aa17■□□□□ 0.31
TPM1-228ENST00000560975 STRCQ7RTU9 1775 aa17■□□□□ 0.31
TPM1-228ENST00000560975 GOLGA8QA0A0J9YX86 632 aa16.99■□□□□ 0.31
TPM1-228ENST00000560975 GOLGA8OA6NCC3 632 aa16.99■□□□□ 0.31
TPM1-228ENST00000560975 GOLGA8NF8WBI6 632 aa16.99■□□□□ 0.31
TPM1-228ENST00000560975 NOP56O00567 594 aaKnown RBP16.99■□□□□ 0.31
TPM1-228ENST00000560975 CSDE1O75534 798 aaKnown RBP16.99■□□□□ 0.31
TPM1-228ENST00000560975 LSM8O95777 96 aaKnown RBP16.99■□□□□ 0.31
TPM1-228ENST00000560975 GRIA1P42261 906 aa16.99■□□□□ 0.31
TPM1-228ENST00000560975 KLF10Q13118 480 aa16.99■□□□□ 0.31
TPM1-228ENST00000560975 APOFQ13790 326 aa16.99■□□□□ 0.31
TPM1-228ENST00000560975 NOMO1Q15155 1222 aa16.99■□□□□ 0.31
TPM1-228ENST00000560975 SP8Q8IXZ3 490 aa16.99■□□□□ 0.31
TPM1-228ENST00000560975 ZBTB8BQ8NAP8 495 aaPredicted RBP16.99■□□□□ 0.31
TPM1-228ENST00000560975 FNDC8Q8TC99 324 aa16.99■□□□□ 0.31
TPM1-228ENST00000560975 GRIN3AQ8TCU5 1115 aa16.99■□□□□ 0.31
TPM1-228ENST00000560975 CDRT15Q96T59 188 aa16.99■□□□□ 0.31
TPM1-228ENST00000560975 CCT7Q99832 543 aa16.99■□□□□ 0.31
TPM1-228ENST00000560975 PKP2Q99959 881 aa16.99■□□□□ 0.31
TPM1-228ENST00000560975 SUDS3Q9H7L9 328 aaPredicted RBP16.99■□□□□ 0.31
TPM1-228ENST00000560975 PLK2Q9NYY3 685 aa16.99■□□□□ 0.31
TPM1-228ENST00000560975 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.99■□□□□ 0.31
TPM1-228ENST00000560975 TPP1O14773 563 aa16.99■□□□□ 0.31
TPM1-228ENST00000560975 SERPINE1P05121 402 aa16.99■□□□□ 0.31
TPM1-228ENST00000560975 THOP1P52888 689 aa16.99■□□□□ 0.31
TPM1-228ENST00000560975 MYL6P60660 151 aa16.99■□□□□ 0.31
TPM1-228ENST00000560975 PCLAFQ15004 111 aa16.99■□□□□ 0.31
TPM1-228ENST00000560975 NRF1Q16656 503 aa16.99■□□□□ 0.31
TPM1-228ENST00000560975 SLC44A4Q53GD3 710 aa16.99■□□□□ 0.31
TPM1-228ENST00000560975 PPM1JQ5JR12 505 aa16.99■□□□□ 0.31
TPM1-228ENST00000560975 DDI1Q8WTU0 396 aa16.99■□□□□ 0.31
TPM1-228ENST00000560975 TARS2Q9BW92 718 aaKnown RBP16.99■□□□□ 0.31
TPM1-228ENST00000560975 PIH1D1Q9NWS0 290 aaKnown RBP16.99■□□□□ 0.31
TPM1-228ENST00000560975 PAK5Q9P286 719 aa16.99■□□□□ 0.31
TPM1-228ENST00000560975 USP18Q9UMW8 372 aa16.99■□□□□ 0.31
TPM1-228ENST00000560975 TMX2Q9Y320 296 aa16.99■□□□□ 0.31
TPM1-228ENST00000560975 PIK3R2O00459 728 aa16.99■□□□□ 0.31
TPM1-228ENST00000560975 ADCY6O43306 1168 aa16.99■□□□□ 0.31
TPM1-228ENST00000560975 VARSP26640 1264 aaKnown RBP16.99■□□□□ 0.31
TPM1-228ENST00000560975 HSD17B4P51659 736 aa16.99■□□□□ 0.31
TPM1-228ENST00000560975 PRKG1Q13976 671 aa16.99■□□□□ 0.31
TPM1-228ENST00000560975 TAZQ16635 292 aa16.99■□□□□ 0.31
TPM1-228ENST00000560975 SLC9B1Q4ZJI4 515 aa16.99■□□□□ 0.31
TPM1-228ENST00000560975 POTEAQ6S8J7 498 aa16.99■□□□□ 0.31
TPM1-228ENST00000560975 GLIS2Q9BZE0 524 aaPredicted RBP16.99■□□□□ 0.31
TPM1-228ENST00000560975 ZNF358Q9NW07 568 aa16.99■□□□□ 0.31
TPM1-228ENST00000560975 ARHGAP28Q9P2N2 729 aa16.99■□□□□ 0.31
TPM1-228ENST00000560975 RSL24D1Q9UHA3 163 aaKnown RBP16.99■□□□□ 0.31
TPM1-228ENST00000560975 RIMS3Q9UJD0 308 aa16.99■□□□□ 0.31
TPM1-228ENST00000560975 PLIN3O60664 434 aa16.98■□□□□ 0.31
TPM1-228ENST00000560975 TCN1P20061 433 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms