RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 HOXB6P17509 224 aaKnown RBP4.35□□□□□ -1.71
SPG11-218ENST00000559754 CD53P19397 219 aa4.35□□□□□ -1.71
SPG11-218ENST00000559754 HTR7P34969 479 aa4.35□□□□□ -1.71
SPG11-218ENST00000559754 ME1P48163 572 aa4.35□□□□□ -1.71
SPG11-218ENST00000559754 DNASE1L3Q13609 305 aa4.35□□□□□ -1.71
SPG11-218ENST00000559754 ACOX1Q15067 660 aa4.35□□□□□ -1.71
SPG11-218ENST00000559754 TRIM71Q2Q1W2 868 aaKnown RBP4.35□□□□□ -1.71
SPG11-218ENST00000559754 IL31Q6EBC2 164 aa4.35□□□□□ -1.71
SPG11-218ENST00000559754 ARFGAP1Q8N6T3 406 aa4.35□□□□□ -1.71
SPG11-218ENST00000559754 ENAHQ8N8S7 591 aaPredicted RBP4.35□□□□□ -1.71
SPG11-218ENST00000559754 MPLKIPQ8TAP9 179 aa4.35□□□□□ -1.71
SPG11-218ENST00000559754 SUN3Q8TAQ9 357 aa4.35□□□□□ -1.71
SPG11-218ENST00000559754 BCAS4Q8TDM0 211 aa4.35□□□□□ -1.71
SPG11-218ENST00000559754 TIFAQ96CG3 184 aa4.35□□□□□ -1.71
SPG11-218ENST00000559754 VCPIP1Q96JH7 1222 aa4.35□□□□□ -1.71
SPG11-218ENST00000559754 ZFYVE19Q96K21 471 aa4.35□□□□□ -1.71
SPG11-218ENST00000559754 RNF26Q9BY78 433 aaPredicted RBP4.35□□□□□ -1.71
SPG11-218ENST00000559754 FOXP1Q9H334 677 aaPredicted RBP4.35□□□□□ -1.71
SPG11-218ENST00000559754 VPS45Q9NRW7 570 aa4.35□□□□□ -1.71
SPG11-218ENST00000559754 TMOD4Q9NZQ9 345 aa4.35□□□□□ -1.71
SPG11-218ENST00000559754 SEMA5BQ9P283 1151 aa4.35□□□□□ -1.71
SPG11-218ENST00000559754 HS3ST3B1Q9Y662 390 aa4.35□□□□□ -1.71
SPG11-218ENST00000559754 CLCA1A8K7I4 914 aa4.34□□□□□ -1.71
SPG11-218ENST00000559754 TTC34A8MYJ7 566 aa4.34□□□□□ -1.71
SPG11-218ENST00000559754 F8W8V4 182 aa4.34□□□□□ -1.71
SPG11-218ENST00000559754 AREL1O15033 823 aa4.34□□□□□ -1.71
SPG11-218ENST00000559754 NPHP1O15259 732 aa4.34□□□□□ -1.71
SPG11-218ENST00000559754 COQ9O75208 318 aa4.34□□□□□ -1.71
SPG11-218ENST00000559754 OAZ2O95190 189 aa4.34□□□□□ -1.71
SPG11-218ENST00000559754 ATICP31939 592 aa4.34□□□□□ -1.71
SPG11-218ENST00000559754 GALNSP34059 522 aa4.34□□□□□ -1.71
SPG11-218ENST00000559754 CPA2P48052 419 aa4.34□□□□□ -1.71
SPG11-218ENST00000559754 NEK3P51956 506 aa4.34□□□□□ -1.71
SPG11-218ENST00000559754 WDR5P61964 334 aaKnown RBP4.34□□□□□ -1.71
SPG11-218ENST00000559754 YPEL5P62699 121 aa4.34□□□□□ -1.71
SPG11-218ENST00000559754 MTAPQ13126 283 aa4.34□□□□□ -1.71
SPG11-218ENST00000559754 KPNB1Q14974 876 aaKnown RBP4.34□□□□□ -1.71
SPG11-218ENST00000559754 SAFBQ15424 915 aaKnown RBP eCLIP4.34□□□□□ -1.71
SPG11-218ENST00000559754 FAM83BQ5T0W9 1011 aa4.34□□□□□ -1.71
SPG11-218ENST00000559754 CYB5RLQ6IPT4 315 aa4.34□□□□□ -1.71
SPG11-218ENST00000559754 GRHL2Q6ISB3 625 aa4.34□□□□□ -1.71
SPG11-218ENST00000559754 USP17L6PQ6QN14 398 aa4.34□□□□□ -1.71
SPG11-218ENST00000559754 PIM3Q86V86 326 aa4.34□□□□□ -1.71
SPG11-218ENST00000559754 MORC1Q86VD1 984 aa4.34□□□□□ -1.71
SPG11-218ENST00000559754 ATP11CQ8NB49 1132 aa4.34□□□□□ -1.71
SPG11-218ENST00000559754 CCDC150Q8NCX0 1101 aa4.34□□□□□ -1.71
SPG11-218ENST00000559754 ELAC2Q9BQ52 826 aaKnown RBP4.34□□□□□ -1.71
SPG11-218ENST00000559754 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.34□□□□□ -1.71
SPG11-218ENST00000559754 EBF3Q9H4W6 596 aa4.34□□□□□ -1.71
SPG11-218ENST00000559754 DAAM1Q9Y4D1 1078 aa4.34□□□□□ -1.71
SPG11-218ENST00000559754 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.33□□□□□ -1.72
SPG11-218ENST00000559754 TULP3O75386 442 aa4.33□□□□□ -1.72
SPG11-218ENST00000559754 TCEA3O75764 348 aa4.33□□□□□ -1.72
SPG11-218ENST00000559754 PLAUP00749 431 aa4.33□□□□□ -1.72
SPG11-218ENST00000559754 SLC3A2P08195 630 aaKnown RBP4.33□□□□□ -1.72
SPG11-218ENST00000559754 CYP19A1P11511 503 aaPredicted RBP4.33□□□□□ -1.72
SPG11-218ENST00000559754 YY1P25490 414 aa4.33□□□□□ -1.72
SPG11-218ENST00000559754 SLC12A2P55011 1212 aa4.33□□□□□ -1.72
SPG11-218ENST00000559754 GPS1Q13098 491 aa4.33□□□□□ -1.72
SPG11-218ENST00000559754 GALEQ14376 348 aa4.33□□□□□ -1.72
SPG11-218ENST00000559754 KCNJ12Q14500 433 aa4.33□□□□□ -1.72
SPG11-218ENST00000559754 CNGA3Q16281 694 aa4.33□□□□□ -1.72
SPG11-218ENST00000559754 COBLL1Q53SF7 1204 aa4.33□□□□□ -1.72
SPG11-218ENST00000559754 FAXCQ5TGI0 409 aa4.33□□□□□ -1.72
SPG11-218ENST00000559754 MRNIPQ6NTE8 343 aa4.33□□□□□ -1.72
SPG11-218ENST00000559754 ERAP2Q6P179 960 aa4.33□□□□□ -1.72
SPG11-218ENST00000559754 TLDC1Q6P9B6 456 aa4.33□□□□□ -1.72
SPG11-218ENST00000559754 TOGARAM2Q6ZUX3 1019 aa4.33□□□□□ -1.72
SPG11-218ENST00000559754 BEND5Q7L4P6 421 aa4.33□□□□□ -1.72
SPG11-218ENST00000559754 PIP4P1Q86T03 277 aa4.33□□□□□ -1.72
SPG11-218ENST00000559754 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.33□□□□□ -1.72
SPG11-218ENST00000559754 UEVLDQ8IX04 471 aa4.33□□□□□ -1.72
SPG11-218ENST00000559754 SAMD14Q8IZD0 417 aaPredicted RBP4.33□□□□□ -1.72
SPG11-218ENST00000559754 MYRIPQ8NFW9 859 aa4.33□□□□□ -1.72
SPG11-218ENST00000559754 P2RY11Q96G91 374 aa4.33□□□□□ -1.72
SPG11-218ENST00000559754 MAGEB5Q9BZ81 275 aa4.33□□□□□ -1.72
SPG11-218ENST00000559754 PPCSQ9HAB8 311 aa4.33□□□□□ -1.72
SPG11-218ENST00000559754 SAP30LQ9HAJ7 183 aa4.33□□□□□ -1.72
SPG11-218ENST00000559754 PTPRHQ9HD43 1115 aa4.33□□□□□ -1.72
SPG11-218ENST00000559754 DDX21Q9NR30 783 aaKnown RBP eCLIP4.33□□□□□ -1.72
SPG11-218ENST00000559754 HEY2Q9UBP5 337 aa4.33□□□□□ -1.72
SPG11-218ENST00000559754 CORO2BQ9UQ03 480 aa4.33□□□□□ -1.72
SPG11-218ENST00000559754 SIRT4Q9Y6E7 314 aaPredicted RBP4.33□□□□□ -1.72
SPG11-218ENST00000559754 PQBP1O60828 265 aaKnown RBP4.32□□□□□ -1.72
SPG11-218ENST00000559754 MBPP02686 304 aaPredicted RBP4.32□□□□□ -1.72
SPG11-218ENST00000559754 MYL4P12829 197 aa4.32□□□□□ -1.72
SPG11-218ENST00000559754 IDEP14735 1019 aa4.32□□□□□ -1.72
SPG11-218ENST00000559754 MATN1P21941 496 aa4.32□□□□□ -1.72
SPG11-218ENST00000559754 MMP8P22894 467 aa4.32□□□□□ -1.72
SPG11-218ENST00000559754 DUSP1P28562 367 aa4.32□□□□□ -1.72
SPG11-218ENST00000559754 SLC5A2P31639 672 aa4.32□□□□□ -1.72
SPG11-218ENST00000559754 RAE1P78406 368 aaKnown RBP4.32□□□□□ -1.72
SPG11-218ENST00000559754 KRT72Q14CN4 511 aa4.32□□□□□ -1.72
SPG11-218ENST00000559754 AASDHQ4L235 1098 aaPredicted RBP4.32□□□□□ -1.72
SPG11-218ENST00000559754 EARS2Q5JPH6 523 aaKnown RBP4.32□□□□□ -1.72
SPG11-218ENST00000559754 RRAGBQ5VZM2 374 aa4.32□□□□□ -1.72
SPG11-218ENST00000559754 ZNF793Q6ZN11 406 aa4.32□□□□□ -1.72
SPG11-218ENST00000559754 PCGF5Q86SE9 256 aa4.32□□□□□ -1.72
SPG11-218ENST00000559754 ZDHHC17Q8IUH5 632 aa4.32□□□□□ -1.72
SPG11-218ENST00000559754 SMAP1Q8IYB5 467 aaPredicted RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms