RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 DMGDHQ9UI17 866 aaKnown RBP17.23■□□□□ 0.35
TPM1-219ENST00000559397 CD207Q9UJ71 328 aa17.23■□□□□ 0.35
TPM1-219ENST00000559397 ZNF197O14709 1029 aa17.22■□□□□ 0.35
TPM1-219ENST00000559397 DAB1O75553 588 aa17.22■□□□□ 0.35
TPM1-219ENST00000559397 TCF4P15884 667 aa17.22■□□□□ 0.35
TPM1-219ENST00000559397 MCM3P25205 808 aa17.22■□□□□ 0.35
TPM1-219ENST00000559397 FLT3P36888 993 aa17.22■□□□□ 0.35
TPM1-219ENST00000559397 ZNF143P52747 638 aaPredicted RBP17.22■□□□□ 0.35
TPM1-219ENST00000559397 CYP4F8P98187 520 aa17.22■□□□□ 0.35
TPM1-219ENST00000559397 SKIV2LQ15477 1246 aaKnown RBP17.22■□□□□ 0.35
TPM1-219ENST00000559397 ATAT1Q5SQI0 421 aa17.22■□□□□ 0.35
TPM1-219ENST00000559397 BTBD8Q5XKL5 378 aa17.22■□□□□ 0.35
TPM1-219ENST00000559397 ZDHHC14Q8IZN3 488 aa17.22■□□□□ 0.35
TPM1-219ENST00000559397 DEFB106AQ8N104 65 aa17.22■□□□□ 0.35
TPM1-219ENST00000559397 EMC1Q8N766 993 aa17.22■□□□□ 0.35
TPM1-219ENST00000559397 EDEM1Q92611 657 aa17.22■□□□□ 0.35
TPM1-219ENST00000559397 SLITRK6Q9H5Y7 841 aa17.22■□□□□ 0.35
TPM1-219ENST00000559397 NAALADL1Q9UQQ1 740 aa17.22■□□□□ 0.35
TPM1-219ENST00000559397 BHMG1C9JSJ3 638 aaPredicted RBP17.21■□□□□ 0.35
TPM1-219ENST00000559397 H3BQ06 376 aaPredicted RBP17.21■□□□□ 0.35
TPM1-219ENST00000559397 DPYSL4O14531 572 aa17.21■□□□□ 0.35
TPM1-219ENST00000559397 LRCH4O75427 683 aa17.21■□□□□ 0.35
TPM1-219ENST00000559397 OAS1P00973 400 aaKnown RBP17.21■□□□□ 0.35
TPM1-219ENST00000559397 TUBP50607 506 aa17.21■□□□□ 0.35
TPM1-219ENST00000559397 SIX1Q15475 284 aaPredicted RBP17.21■□□□□ 0.35
TPM1-219ENST00000559397 TEAD2Q15562 447 aa17.21■□□□□ 0.35
TPM1-219ENST00000559397 CYP1B1Q16678 543 aa17.21■□□□□ 0.35
TPM1-219ENST00000559397 SYPL2Q5VXT5 272 aa17.21■□□□□ 0.35
TPM1-219ENST00000559397 POTEHQ6S545 545 aa17.21■□□□□ 0.35
TPM1-219ENST00000559397 POLNQ7Z5Q5 900 aa17.21■□□□□ 0.35
TPM1-219ENST00000559397 KLHL7Q8IXQ5 586 aa17.21■□□□□ 0.35
TPM1-219ENST00000559397 ITFG1Q8TB96 612 aa17.21■□□□□ 0.35
TPM1-219ENST00000559397 SUSD6Q92537 303 aa17.21■□□□□ 0.35
TPM1-219ENST00000559397 MRPS31Q92665 395 aaKnown RBP17.21■□□□□ 0.35
TPM1-219ENST00000559397 GCNAQ96QF7 691 aa17.21■□□□□ 0.35
TPM1-219ENST00000559397 CNPY3Q9BT09 278 aa17.21■□□□□ 0.35
TPM1-219ENST00000559397 TRIM62Q9BVG3 475 aa17.21■□□□□ 0.35
TPM1-219ENST00000559397 CCSER2Q9H7U1 834 aa17.21■□□□□ 0.35
TPM1-219ENST00000559397 STIM2Q9P246 746 aa17.21■□□□□ 0.35
TPM1-219ENST00000559397 CLUHO75153 1309 aa17.21■□□□□ 0.34
TPM1-219ENST00000559397 DENND4AQ7Z401 1863 aa17.21■□□□□ 0.34
TPM1-219ENST00000559397 GOLGA6L10A0A0M3HER8 536 aa17.2■□□□□ 0.34
TPM1-219ENST00000559397 C2orf78A6NCI8 922 aa17.2■□□□□ 0.34
TPM1-219ENST00000559397 RAD51CO43502 376 aa17.2■□□□□ 0.34
TPM1-219ENST00000559397 TLR5O60602 858 aa17.2■□□□□ 0.34
TPM1-219ENST00000559397 ZRANB2O95218 330 aaKnown RBP eCLIP17.2■□□□□ 0.34
TPM1-219ENST00000559397 RALAP11233 206 aa17.2■□□□□ 0.34
TPM1-219ENST00000559397 NCAM1P13591 858 aa17.2■□□□□ 0.34
TPM1-219ENST00000559397 GPD1P21695 349 aa17.2■□□□□ 0.34
TPM1-219ENST00000559397 KCNA5P22460 613 aa17.2■□□□□ 0.34
TPM1-219ENST00000559397 NOS2P35228 1153 aa17.2■□□□□ 0.34
TPM1-219ENST00000559397 MATKP42679 507 aa17.2■□□□□ 0.34
TPM1-219ENST00000559397 SLC25A11Q02978 314 aaKnown RBP17.2■□□□□ 0.34
TPM1-219ENST00000559397 HECTD3Q5T447 861 aa17.2■□□□□ 0.34
TPM1-219ENST00000559397 STXBP5Q5T5C0 1151 aa17.2■□□□□ 0.34
TPM1-219ENST00000559397 TXNDC8Q6A555 127 aa17.2■□□□□ 0.34
TPM1-219ENST00000559397 RCOR2Q8IZ40 523 aa17.2■□□□□ 0.34
TPM1-219ENST00000559397 PRELID2Q8N945 189 aa17.2■□□□□ 0.34
TPM1-219ENST00000559397 RXFP2Q8WXD0 754 aa17.2■□□□□ 0.34
TPM1-219ENST00000559397 RIPOR3Q96MK2 946 aa17.2■□□□□ 0.34
TPM1-219ENST00000559397 DDX23Q9BUQ8 820 aaKnown RBP17.2■□□□□ 0.34
TPM1-219ENST00000559397 DDX47Q9H0S4 455 aaKnown RBP17.2■□□□□ 0.34
TPM1-219ENST00000559397 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.2■□□□□ 0.34
TPM1-219ENST00000559397 NUDT5Q9UKK9 219 aa17.2■□□□□ 0.34
TPM1-219ENST00000559397 MRPS23Q9Y3D9 190 aaKnown RBP17.2■□□□□ 0.34
TPM1-219ENST00000559397 TCRBV7S2A1N4TA0A589 114 aa17.2■□□□□ 0.34
TPM1-219ENST00000559397 CAPN9O14815 690 aa17.2■□□□□ 0.34
TPM1-219ENST00000559397 OLFM2O95897 454 aa17.2■□□□□ 0.34
TPM1-219ENST00000559397 TBX18O95935 607 aa17.2■□□□□ 0.34
TPM1-219ENST00000559397 CEBPBP17676 345 aa17.2■□□□□ 0.34
TPM1-219ENST00000559397 FSHRP23945 695 aa17.2■□□□□ 0.34
TPM1-219ENST00000559397 DDX6P26196 483 aaKnown RBP eCLIP17.2■□□□□ 0.34
TPM1-219ENST00000559397 TNFRSF8P28908 595 aa17.2■□□□□ 0.34
TPM1-219ENST00000559397 PCK1P35558 622 aa17.2■□□□□ 0.34
TPM1-219ENST00000559397 MTHFRP42898 656 aa17.2■□□□□ 0.34
TPM1-219ENST00000559397 MRPS25P82663 173 aaKnown RBP17.2■□□□□ 0.34
TPM1-219ENST00000559397 SLC7A5Q01650 507 aa17.2■□□□□ 0.34
TPM1-219ENST00000559397 DCAF6Q58WW2 860 aa17.2■□□□□ 0.34
TPM1-219ENST00000559397 MSANTD2Q6P1R3 559 aa17.2■□□□□ 0.34
TPM1-219ENST00000559397 CCNI2Q6ZMN8 369 aaPredicted RBP17.2■□□□□ 0.34
TPM1-219ENST00000559397 HLA-CQ95604 372 aa17.2■□□□□ 0.34
TPM1-219ENST00000559397 NT5C3BQ969T7 300 aa17.2■□□□□ 0.34
TPM1-219ENST00000559397 SLC46A2Q9BY10 475 aa17.2■□□□□ 0.34
TPM1-219ENST00000559397 RNF38Q9H0F5 515 aa17.2■□□□□ 0.34
TPM1-219ENST00000559397 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.2■□□□□ 0.34
TPM1-219ENST00000559397 ZNF446Q9NWS9 450 aa17.2■□□□□ 0.34
TPM1-219ENST00000559397 DDX56Q9NY93 547 aaKnown RBP17.2■□□□□ 0.34
TPM1-219ENST00000559397 COL6A3P12111 3177 aa17.19■□□□□ 0.34
TPM1-219ENST00000559397 GRXCR2A6NFK2 248 aa17.19■□□□□ 0.34
TPM1-219ENST00000559397 SOBPA7XYQ1 873 aa17.19■□□□□ 0.34
TPM1-219ENST00000559397 COCHO43405 550 aa17.19■□□□□ 0.34
TPM1-219ENST00000559397 PHF2O75151 1096 aa17.19■□□□□ 0.34
TPM1-219ENST00000559397 RARAP10276 462 aa17.19■□□□□ 0.34
TPM1-219ENST00000559397 PDGFRAP16234 1089 aa17.19■□□□□ 0.34
TPM1-219ENST00000559397 PFKLP17858 780 aa17.19■□□□□ 0.34
TPM1-219ENST00000559397 SSR1P43307 286 aaKnown RBP17.19■□□□□ 0.34
TPM1-219ENST00000559397 PITX1P78337 314 aaPredicted RBP17.19■□□□□ 0.34
TPM1-219ENST00000559397 CCDC14Q49A88 953 aa17.19■□□□□ 0.34
TPM1-219ENST00000559397 ATP13A4Q4VNC1 1196 aa17.19■□□□□ 0.34
TPM1-219ENST00000559397 OTUD1Q5VV17 481 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms