RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 UNC45BQ8IWX7 931 aa18.37■□□□□ 0.53
SMAD3-210ENST00000559092 SCUBE3Q8IX30 993 aa18.37■□□□□ 0.53
SMAD3-210ENST00000559092 MDGA1Q8NFP4 955 aa18.37■□□□□ 0.53
SMAD3-210ENST00000559092 OLIG1Q8TAK6 271 aa18.37■□□□□ 0.53
SMAD3-210ENST00000559092 BHMTQ93088 406 aa18.37■□□□□ 0.53
SMAD3-210ENST00000559092 AZIN2Q96A70 460 aa18.37■□□□□ 0.53
SMAD3-210ENST00000559092 DUSP15Q9H1R2 295 aaPredicted RBP18.37■□□□□ 0.53
SMAD3-210ENST00000559092 PLK2Q9NYY3 685 aa18.37■□□□□ 0.53
SMAD3-210ENST00000559092 HCN2Q9UL51 889 aa18.37■□□□□ 0.53
SMAD3-210ENST00000559092 BECN2A8MW95 431 aa18.36■□□□□ 0.53
SMAD3-210ENST00000559092 PRRT4C9JH25 899 aa18.36■□□□□ 0.53
SMAD3-210ENST00000559092 GOLGA6L22H0YM25 854 aa18.36■□□□□ 0.53
SMAD3-210ENST00000559092 PIK3R2O00459 728 aa18.36■□□□□ 0.53
SMAD3-210ENST00000559092 ZBTB24O43167 697 aaPredicted RBP18.36■□□□□ 0.53
SMAD3-210ENST00000559092 THAP12O43422 761 aa18.36■□□□□ 0.53
SMAD3-210ENST00000559092 TIMM44O43615 452 aa18.36■□□□□ 0.53
SMAD3-210ENST00000559092 EEF1GP26641 437 aaKnown RBP18.36■□□□□ 0.53
SMAD3-210ENST00000559092 USP8P40818 1118 aa18.36■□□□□ 0.53
SMAD3-210ENST00000559092 ARHGAP44Q17R89 818 aa18.36■□□□□ 0.53
SMAD3-210ENST00000559092 MPPE1Q53F39 396 aa18.36■□□□□ 0.53
SMAD3-210ENST00000559092 NUGGCQ68CJ6 796 aa18.36■□□□□ 0.53
SMAD3-210ENST00000559092 GJB7Q6PEY0 223 aa18.36■□□□□ 0.53
SMAD3-210ENST00000559092 TOGARAM2Q6ZUX3 1019 aa18.36■□□□□ 0.53
SMAD3-210ENST00000559092 ENOX1Q8TC92 643 aaKnown RBP18.36■□□□□ 0.53
SMAD3-210ENST00000559092 DDI1Q8WTU0 396 aa18.36■□□□□ 0.53
SMAD3-210ENST00000559092 P2RY11Q96G91 374 aa18.36■□□□□ 0.53
SMAD3-210ENST00000559092 GABRG3Q99928 467 aa18.36■□□□□ 0.53
SMAD3-210ENST00000559092 MIS12Q9H081 205 aa18.36■□□□□ 0.53
SMAD3-210ENST00000559092 ST7Q9NRC1 585 aa18.36■□□□□ 0.53
SMAD3-210ENST00000559092 DCHS1Q96JQ0 3298 aa18.36■□□□□ 0.53
SMAD3-210ENST00000559092 IGLV3-27P01718 113 aa18.35■□□□□ 0.53
SMAD3-210ENST00000559092 NCAM1P13591 858 aa18.35■□□□□ 0.53
SMAD3-210ENST00000559092 APBA1Q02410 837 aa18.35■□□□□ 0.53
SMAD3-210ENST00000559092 PTK2Q05397 1052 aa18.35■□□□□ 0.53
SMAD3-210ENST00000559092 NNTQ13423 1086 aa18.35■□□□□ 0.53
SMAD3-210ENST00000559092 RSPO4Q2I0M5 234 aaPredicted RBP18.35■□□□□ 0.53
SMAD3-210ENST00000559092 MIIPQ5JXC2 388 aa18.35■□□□□ 0.53
SMAD3-210ENST00000559092 EGFLAMQ63HQ2 1017 aa18.35■□□□□ 0.53
SMAD3-210ENST00000559092 RBM43Q6ZSC3 357 aaKnown RBP18.35■□□□□ 0.53
SMAD3-210ENST00000559092 CHPFQ8IZ52 775 aa18.35■□□□□ 0.53
SMAD3-210ENST00000559092 GPT2Q8TD30 523 aa18.35■□□□□ 0.53
SMAD3-210ENST00000559092 CLEC4CQ8WTT0 213 aa18.35■□□□□ 0.53
SMAD3-210ENST00000559092 PIWIL1Q96J94 861 aaKnown RBP18.35■□□□□ 0.53
SMAD3-210ENST00000559092 LHX5Q9H2C1 402 aa18.35■□□□□ 0.53
SMAD3-210ENST00000559092 SIX2Q9NPC8 291 aa18.35■□□□□ 0.53
SMAD3-210ENST00000559092 DNAJC12Q9UKB3 198 aa18.35■□□□□ 0.53
SMAD3-210ENST00000559092 DNAH14Q0VDD8 3507 aa18.35■□□□□ 0.53
SMAD3-210ENST00000559092 MYH10P35580 1976 aa18.35■□□□□ 0.53
SMAD3-210ENST00000559092 A0A1W2PQF6 199 aa18.34■□□□□ 0.53
SMAD3-210ENST00000559092 TCRBV21S2A2A0A5A6 115 aa18.34■□□□□ 0.53
SMAD3-210ENST00000559092 KCNJ18B7U540 433 aa18.34■□□□□ 0.53
SMAD3-210ENST00000559092 DCLK1O15075 740 aa18.34■□□□□ 0.53
SMAD3-210ENST00000559092 MSI1O43347 362 aaKnown RBP18.34■□□□□ 0.53
SMAD3-210ENST00000559092 FYNP06241 537 aa18.34■□□□□ 0.53
SMAD3-210ENST00000559092 ZNF806P0C7X5 589 aa18.34■□□□□ 0.53
SMAD3-210ENST00000559092 HOXB2P14652 356 aa18.34■□□□□ 0.53
SMAD3-210ENST00000559092 SLC11A2P49281 568 aa18.34■□□□□ 0.53
SMAD3-210ENST00000559092 BPIFB4P59827 614 aa18.34■□□□□ 0.53
SMAD3-210ENST00000559092 KCNJ12Q14500 433 aa18.34■□□□□ 0.53
SMAD3-210ENST00000559092 EIF4HQ15056 248 aaKnown RBP18.34■□□□□ 0.53
SMAD3-210ENST00000559092 TCP11X2Q5H9J9 407 aa18.34■□□□□ 0.53
SMAD3-210ENST00000559092 MPP7Q5T2T1 576 aa18.34■□□□□ 0.53
SMAD3-210ENST00000559092 PRR23CQ6ZRP0 262 aa18.34■□□□□ 0.53
SMAD3-210ENST00000559092 ANKS1BQ7Z6G8 1248 aa18.34■□□□□ 0.53
SMAD3-210ENST00000559092 UCMAQ8WVF2 138 aa18.34■□□□□ 0.53
SMAD3-210ENST00000559092 HMGB4Q8WW32 186 aa18.34■□□□□ 0.53
SMAD3-210ENST00000559092 TMA16Q96EY4 203 aaKnown RBP18.34■□□□□ 0.53
SMAD3-210ENST00000559092 TPSD1Q9BZJ3 242 aa18.34■□□□□ 0.53
SMAD3-210ENST00000559092 ARRDC1-AS1Q9H2J1 176 aa18.34■□□□□ 0.53
SMAD3-210ENST00000559092 ZDHHC4Q9NPG8 344 aa18.34■□□□□ 0.53
SMAD3-210ENST00000559092 ACP6Q9NPH0 428 aa18.34■□□□□ 0.53
SMAD3-210ENST00000559092 BCCIPQ9P287 314 aaKnown RBP eCLIP18.34■□□□□ 0.53
SMAD3-210ENST00000559092 PCDHGC3Q9UN70 934 aa18.34■□□□□ 0.53
SMAD3-210ENST00000559092 CEP250Q9BV73 2442 aa18.34■□□□□ 0.53
SMAD3-210ENST00000559092 FOXN3O00409 490 aaPredicted RBP18.33■□□□□ 0.52
SMAD3-210ENST00000559092 IRAK2O43187 625 aa18.33■□□□□ 0.52
SMAD3-210ENST00000559092 PAPSS1O43252 624 aaPredicted RBP18.33■□□□□ 0.52
SMAD3-210ENST00000559092 GBP1P32455 592 aa18.33■□□□□ 0.52
SMAD3-210ENST00000559092 P2RY2P41231 377 aa18.33■□□□□ 0.52
SMAD3-210ENST00000559092 TBX4P57082 545 aa18.33■□□□□ 0.52
SMAD3-210ENST00000559092 SNX16P57768 344 aa18.33■□□□□ 0.52
SMAD3-210ENST00000559092 YWHAZP63104 245 aaKnown RBP18.33■□□□□ 0.52
SMAD3-210ENST00000559092 SPDYCQ5MJ68 293 aa18.33■□□□□ 0.52
SMAD3-210ENST00000559092 PLA2G2CQ5R387 149 aa18.33■□□□□ 0.52
SMAD3-210ENST00000559092 FAM71AQ8IYT1 594 aa18.33■□□□□ 0.52
SMAD3-210ENST00000559092 SPACA7Q96KW9 195 aa18.33■□□□□ 0.52
SMAD3-210ENST00000559092 SERPINB11Q96P15 392 aa18.33■□□□□ 0.52
SMAD3-210ENST00000559092 ACOX2Q99424 681 aa18.33■□□□□ 0.52
SMAD3-210ENST00000559092 DDX50Q9BQ39 737 aaKnown RBP18.33■□□□□ 0.52
SMAD3-210ENST00000559092 SAMSN1Q9NSI8 373 aaKnown RBP18.33■□□□□ 0.52
SMAD3-210ENST00000559092 CYTH4Q9UIA0 394 aa18.33■□□□□ 0.52
SMAD3-210ENST00000559092 CDV3Q9UKY7 258 aaKnown RBP18.33■□□□□ 0.52
SMAD3-210ENST00000559092 TLR6Q9Y2C9 796 aa18.33■□□□□ 0.52
SMAD3-210ENST00000559092 NFE2L3Q9Y4A8 694 aa18.33■□□□□ 0.52
SMAD3-210ENST00000559092 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.33■□□□□ 0.52
SMAD3-210ENST00000559092 E5RJQ4 531 aa18.32■□□□□ 0.52
SMAD3-210ENST00000559092 CAPN9O14815 690 aa18.32■□□□□ 0.52
SMAD3-210ENST00000559092 GLI1P08151 1106 aa18.32■□□□□ 0.52
SMAD3-210ENST00000559092 HOXD9P28356 352 aaPredicted RBP18.32■□□□□ 0.52
SMAD3-210ENST00000559092 PDCLQ13371 301 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms