RNA–Protein interactions for RNA: ENST00000558995.5

CPNE6-210, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-210ENST00000558995 KLF11O14901 512 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 DYNC1LI2O43237 492 aaPredicted RBP13.87□□□□□ -0.19
CPNE6-210ENST00000558995 PEX11AO75192 247 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 DESP17661 470 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 CALB2P22676 271 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 PRKCHP24723 683 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 SERPINB4P48594 390 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 SLC6A3Q01959 620 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 ANKRD20A2Q5SQ80 823 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 ANKRD20A1Q5TYW2 823 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 ANKRD20A3Q5VUR7 823 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 PMF1Q6P1K2 205 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 TMEM110Q86TL2 294 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 CAND1Q86VP6 1230 aaKnown RBP13.87□□□□□ -0.19
CPNE6-210ENST00000558995 CTAGE3PQ8IX95 158 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 MCUQ8NE86 351 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 SH3TC2Q8TF17 1288 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 APBB2Q92870 758 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 LRRC39Q96DD0 335 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 ZNF670Q9BS34 389 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 SLC4A5Q9BY07 1137 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 NMRK2Q9NPI5 230 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 SLC5A4Q9NY91 659 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 FLRT1Q9NZU1 646 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 NKX1-2Q9UD57 310 aaPredicted RBP13.87□□□□□ -0.19
CPNE6-210ENST00000558995 ZNF487B1APH4 448 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 TRIM49D1C9J1S8 452 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 MDM4O15151 490 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 CCDC22O60826 627 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 HAUS5O94927 633 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 APRTP07741 180 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 GSTA2P09210 222 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 GNAZP19086 355 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 BGNP21810 368 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 DEUP1Q05D60 604 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 KIZQ2M2Z5 673 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 PKDCCQ504Y2 493 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 BZW1Q7L1Q6 419 aaKnown RBP13.87□□□□□ -0.19
CPNE6-210ENST00000558995 STK32AQ8WU08 396 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 KHSRPQ92945 711 aaKnown RBP eCLIP13.87□□□□□ -0.19
CPNE6-210ENST00000558995 KIF12Q96FN5 646 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 ZNF570Q96NI8 536 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 SRPK1Q96SB4 655 aaKnown RBP13.87□□□□□ -0.19
CPNE6-210ENST00000558995 SNRNP25Q9BV90 132 aaKnown RBP13.87□□□□□ -0.19
CPNE6-210ENST00000558995 KCNK13Q9HB14 408 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 MGAMO43451 1857 aa13.86□□□□□ -0.19
CPNE6-210ENST00000558995 TSPAN1O60635 241 aa13.86□□□□□ -0.19
CPNE6-210ENST00000558995 SMNDC1O75940 238 aaKnown RBP eCLIP13.86□□□□□ -0.19
CPNE6-210ENST00000558995 DLDP09622 509 aaKnown RBP13.86□□□□□ -0.19
CPNE6-210ENST00000558995 SNX16P57768 344 aa13.86□□□□□ -0.19
CPNE6-210ENST00000558995 CDK16Q00536 496 aa13.86□□□□□ -0.19
CPNE6-210ENST00000558995 PPP1R26Q5T8A7 1209 aaPredicted RBP13.86□□□□□ -0.19
CPNE6-210ENST00000558995 SAPCD2Q86UD0 394 aa13.86□□□□□ -0.19
CPNE6-210ENST00000558995 SESTD1Q86VW0 696 aa13.86□□□□□ -0.19
CPNE6-210ENST00000558995 TMEM120AQ9BXJ8 343 aa13.86□□□□□ -0.19
CPNE6-210ENST00000558995 FAM49AQ9H0Q0 323 aaPredicted RBP13.86□□□□□ -0.19
CPNE6-210ENST00000558995 HTTP42858 3142 aa13.86□□□□□ -0.19
CPNE6-210ENST00000558995 GM2AP17900 193 aa13.86□□□□□ -0.19
CPNE6-210ENST00000558995 DGKDQ16760 1214 aa13.86□□□□□ -0.19
CPNE6-210ENST00000558995 CA9Q16790 459 aa13.86□□□□□ -0.19
CPNE6-210ENST00000558995 FAXCQ5TGI0 409 aa13.86□□□□□ -0.19
CPNE6-210ENST00000558995 TTC30AQ86WT1 665 aa13.86□□□□□ -0.19
CPNE6-210ENST00000558995 CDKL3Q8IVW4 592 aaPredicted RBP13.86□□□□□ -0.19
CPNE6-210ENST00000558995 ENDOVQ8N8Q3 282 aaKnown RBP13.86□□□□□ -0.19
CPNE6-210ENST00000558995 SLC35F5Q8WV83 523 aa13.86□□□□□ -0.19
CPNE6-210ENST00000558995 SKA1Q96BD8 255 aa13.86□□□□□ -0.19
CPNE6-210ENST00000558995 PTCD3Q96EY7 689 aaKnown RBP13.86□□□□□ -0.19
CPNE6-210ENST00000558995 NSL1Q96IY1 281 aa13.86□□□□□ -0.19
CPNE6-210ENST00000558995 NUDCD1Q96RS6 583 aa13.86□□□□□ -0.19
CPNE6-210ENST00000558995 PLAC1Q9HBJ0 212 aa13.86□□□□□ -0.19
CPNE6-210ENST00000558995 TMEM98Q9Y2Y6 226 aa13.86□□□□□ -0.19
CPNE6-210ENST00000558995 CXorf49A8MYA2 514 aaPredicted RBP13.85□□□□□ -0.19
CPNE6-210ENST00000558995 ZBTB16Q05516 673 aa13.85□□□□□ -0.19
CPNE6-210ENST00000558995 CCL14Q16627 93 aa13.85□□□□□ -0.19
CPNE6-210ENST00000558995 TSNAXIP1Q2TAA8 658 aa13.85□□□□□ -0.19
CPNE6-210ENST00000558995 ACOT1Q86TX2 421 aa13.85□□□□□ -0.19
CPNE6-210ENST00000558995 ZDHHC17Q8IUH5 632 aa13.85□□□□□ -0.19
CPNE6-210ENST00000558995 SCUBE3Q8IX30 993 aa13.85□□□□□ -0.19
CPNE6-210ENST00000558995 CCDC110Q8TBZ0 833 aa13.85□□□□□ -0.19
CPNE6-210ENST00000558995 GORASP1Q9BQQ3 440 aa13.85□□□□□ -0.19
CPNE6-210ENST00000558995 CXCL16Q9H2A7 254 aa13.85□□□□□ -0.19
CPNE6-210ENST00000558995 DENND2DQ9H6A0 471 aaPredicted RBP13.85□□□□□ -0.19
CPNE6-210ENST00000558995 PLLPQ9Y342 182 aa13.85□□□□□ -0.19
CPNE6-210ENST00000558995 SLC15A5A6NIM6 579 aa13.85□□□□□ -0.19
CPNE6-210ENST00000558995 APOEP02649 317 aa13.85□□□□□ -0.19
CPNE6-210ENST00000558995 TPBGLP0DKB5 382 aa13.85□□□□□ -0.19
CPNE6-210ENST00000558995 SERPINB3P29508 390 aa13.85□□□□□ -0.19
CPNE6-210ENST00000558995 GRM5P41594 1212 aa13.85□□□□□ -0.19
CPNE6-210ENST00000558995 HDAC4P56524 1084 aa13.85□□□□□ -0.19
CPNE6-210ENST00000558995 KRT72Q14CN4 511 aa13.85□□□□□ -0.19
CPNE6-210ENST00000558995 FAM182AQ5T1J6 154 aa13.85□□□□□ -0.19
CPNE6-210ENST00000558995 CDHR3Q6ZTQ4 885 aa13.85□□□□□ -0.19
CPNE6-210ENST00000558995 SDCCAG8Q86SQ7 713 aaPredicted RBP13.85□□□□□ -0.19
CPNE6-210ENST00000558995 MIPEPQ99797 713 aa13.85□□□□□ -0.19
CPNE6-210ENST00000558995 MRPL45Q9BRJ2 306 aaKnown RBP13.85□□□□□ -0.19
CPNE6-210ENST00000558995 BTBD10Q9BSF8 475 aa13.85□□□□□ -0.19
CPNE6-210ENST00000558995 NRDE2Q9H7Z3 1164 aa13.85□□□□□ -0.19
CPNE6-210ENST00000558995 ARL8BQ9NVJ2 186 aa13.85□□□□□ -0.19
CPNE6-210ENST00000558995 COL1A2P08123 1366 aa13.85□□□□□ -0.19
CPNE6-210ENST00000558995 PAPSS1O43252 624 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms