RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 SERPINA13PQ6UXR4 307 aa12.54□□□□□ -0.4
SMAD3-206ENST00000558739 ATG14Q6ZNE5 492 aa12.54□□□□□ -0.4
SMAD3-206ENST00000558739 GPBP1Q86WP2 473 aa12.54□□□□□ -0.4
SMAD3-206ENST00000558739 BRSK2Q8IWQ3 736 aa12.54□□□□□ -0.4
SMAD3-206ENST00000558739 NUP93Q8N1F7 819 aa12.54□□□□□ -0.4
SMAD3-206ENST00000558739 POMGNT1Q8WZA1 660 aa12.54□□□□□ -0.4
SMAD3-206ENST00000558739 KLF16Q9BXK1 252 aaPredicted RBP12.54□□□□□ -0.4
SMAD3-206ENST00000558739 NACA2Q9H009 215 aa12.54□□□□□ -0.4
SMAD3-206ENST00000558739 STARD5Q9NSY2 213 aa12.54□□□□□ -0.4
SMAD3-206ENST00000558739 SERGEFQ9UGK8 458 aa12.54□□□□□ -0.4
SMAD3-206ENST00000558739 ADAMTS1Q9UHI8 967 aa12.54□□□□□ -0.4
SMAD3-206ENST00000558739 KCNG1Q9UIX4 513 aa12.54□□□□□ -0.4
SMAD3-206ENST00000558739 ITGA11Q9UKX5 1188 aa12.54□□□□□ -0.4
SMAD3-206ENST00000558739 GOLGA8IPA6NC78 632 aa12.53□□□□□ -0.4
SMAD3-206ENST00000558739 FAM47DPA6NHR8 397 aa12.53□□□□□ -0.4
SMAD3-206ENST00000558739 GOLGA8JA6NMD2 632 aa12.53□□□□□ -0.4
SMAD3-206ENST00000558739 SDC3O75056 442 aa12.53□□□□□ -0.4
SMAD3-206ENST00000558739 DXOO77932 396 aaKnown RBP12.53□□□□□ -0.4
SMAD3-206ENST00000558739 FAM13AO94988 1023 aa12.53□□□□□ -0.4
SMAD3-206ENST00000558739 CKMT2P17540 419 aa12.53□□□□□ -0.4
SMAD3-206ENST00000558739 WARSP23381 471 aaKnown RBP12.53□□□□□ -0.4
SMAD3-206ENST00000558739 DDIT3P35638 169 aa12.53□□□□□ -0.4
SMAD3-206ENST00000558739 TUBP50607 506 aa12.53□□□□□ -0.4
SMAD3-206ENST00000558739 BCAT1P54687 386 aa12.53□□□□□ -0.4
SMAD3-206ENST00000558739 RACK1P63244 317 aaKnown RBP12.53□□□□□ -0.4
SMAD3-206ENST00000558739 TLE1Q04724 770 aa12.53□□□□□ -0.4
SMAD3-206ENST00000558739 MAPRE1Q15691 268 aaKnown RBP12.53□□□□□ -0.4
SMAD3-206ENST00000558739 PROX2Q3B8N5 592 aa12.53□□□□□ -0.4
SMAD3-206ENST00000558739 TMEM119Q4V9L6 283 aa12.53□□□□□ -0.4
SMAD3-206ENST00000558739 HYIQ5T013 277 aa12.53□□□□□ -0.4
SMAD3-206ENST00000558739 SNX30Q5VWJ9 437 aa12.53□□□□□ -0.4
SMAD3-206ENST00000558739 FYB2Q5VWT5 728 aa12.53□□□□□ -0.4
SMAD3-206ENST00000558739 Q6ZNB5 142 aa12.53□□□□□ -0.4
SMAD3-206ENST00000558739 NT5DC4Q86YG4 428 aa12.53□□□□□ -0.4
SMAD3-206ENST00000558739 OR5B17Q8NGF7 314 aa12.53□□□□□ -0.4
SMAD3-206ENST00000558739 OR2T3Q8NH03 318 aa12.53□□□□□ -0.4
SMAD3-206ENST00000558739 HPDLQ96IR7 371 aa12.53□□□□□ -0.4
SMAD3-206ENST00000558739 B3GNT5Q9BYG0 378 aa12.53□□□□□ -0.4
SMAD3-206ENST00000558739 CIPCQ9C0C6 399 aa12.53□□□□□ -0.4
SMAD3-206ENST00000558739 BTBD1Q9H0C5 482 aa12.53□□□□□ -0.4
SMAD3-206ENST00000558739 GZF1Q9H116 711 aaPredicted RBP12.53□□□□□ -0.4
SMAD3-206ENST00000558739 ZHX3Q9H4I2 956 aa12.53□□□□□ -0.4
SMAD3-206ENST00000558739 PARVGQ9HBI0 331 aa12.53□□□□□ -0.4
SMAD3-206ENST00000558739 PDE11AQ9HCR9 933 aa12.53□□□□□ -0.4
SMAD3-206ENST00000558739 OSER1Q9NX31 292 aa12.53□□□□□ -0.4
SMAD3-206ENST00000558739 NUDT5Q9UKK9 219 aa12.53□□□□□ -0.4
SMAD3-206ENST00000558739 ODF2LQ9ULJ1 636 aa12.53□□□□□ -0.4
SMAD3-206ENST00000558739 SLC27A6Q9Y2P4 619 aa12.53□□□□□ -0.4
SMAD3-206ENST00000558739 RP1P56715 2156 aa12.52□□□□□ -0.4
SMAD3-206ENST00000558739 TRIM38O00635 465 aa12.52□□□□□ -0.41
SMAD3-206ENST00000558739 SIGLEC6O43699 453 aa12.52□□□□□ -0.41
SMAD3-206ENST00000558739 DFNA5O60443 496 aa12.52□□□□□ -0.41
SMAD3-206ENST00000558739 REC8O95072 547 aa12.52□□□□□ -0.41
SMAD3-206ENST00000558739 PENKP01210 267 aaPredicted RBP12.52□□□□□ -0.41
SMAD3-206ENST00000558739 FAM87AP0C7U9 286 aa12.52□□□□□ -0.41
SMAD3-206ENST00000558739 ACP1P24666 158 aa12.52□□□□□ -0.41
SMAD3-206ENST00000558739 RPS14P62263 151 aaKnown RBP12.52□□□□□ -0.41
SMAD3-206ENST00000558739 RBP5P82980 135 aa12.52□□□□□ -0.41
SMAD3-206ENST00000558739 SRSF6Q13247 344 aaKnown RBP12.52□□□□□ -0.41
SMAD3-206ENST00000558739 ILKQ13418 452 aa12.52□□□□□ -0.41
SMAD3-206ENST00000558739 CAMK2GQ13555 558 aaPredicted RBP12.52□□□□□ -0.41
SMAD3-206ENST00000558739 KCNJ12Q14500 433 aa12.52□□□□□ -0.41
SMAD3-206ENST00000558739 CACTIN-AS1Q8N1I8 211 aa12.52□□□□□ -0.41
SMAD3-206ENST00000558739 PDZD8Q8NEN9 1154 aa12.52□□□□□ -0.41
SMAD3-206ENST00000558739 CYB5D2Q8WUJ1 264 aa12.52□□□□□ -0.41
SMAD3-206ENST00000558739 OVCA2Q8WZ82 227 aa12.52□□□□□ -0.41
SMAD3-206ENST00000558739 EXTL1Q92935 676 aa12.52□□□□□ -0.41
SMAD3-206ENST00000558739 PIWIL1Q96J94 861 aaKnown RBP12.52□□□□□ -0.41
SMAD3-206ENST00000558739 RAB34Q9BZG1 259 aa12.52□□□□□ -0.41
SMAD3-206ENST00000558739 DPH1Q9BZG8 443 aa12.52□□□□□ -0.41
SMAD3-206ENST00000558739 ELOVL4Q9GZR5 314 aa12.52□□□□□ -0.41
SMAD3-206ENST00000558739 MTG2Q9H4K7 406 aa12.52□□□□□ -0.41
SMAD3-206ENST00000558739 ELOVL2Q9NXB9 296 aa12.52□□□□□ -0.41
SMAD3-206ENST00000558739 RBAKQ9NYW8 714 aaPredicted RBP12.52□□□□□ -0.41
SMAD3-206ENST00000558739 KCND2Q9NZV8 630 aa12.52□□□□□ -0.41
SMAD3-206ENST00000558739 SRPK3Q9UPE1 567 aa12.52□□□□□ -0.41
SMAD3-206ENST00000558739 ADGRG4Q8IZF6 3080 aa12.52□□□□□ -0.41
SMAD3-206ENST00000558739 A0A1W2PPC4 97 aa12.51□□□□□ -0.41
SMAD3-206ENST00000558739 A0A1W2PR77 199 aa12.51□□□□□ -0.41
SMAD3-206ENST00000558739 EFSO43281 561 aa12.51□□□□□ -0.41
SMAD3-206ENST00000558739 CSO75390 466 aaKnown RBP12.51□□□□□ -0.41
SMAD3-206ENST00000558739 RTN3O95197 1032 aaPredicted RBP12.51□□□□□ -0.41
SMAD3-206ENST00000558739 AFPP02771 609 aaKnown RBP12.51□□□□□ -0.41
SMAD3-206ENST00000558739 KLKB1P03952 638 aa12.51□□□□□ -0.41
SMAD3-206ENST00000558739 PTPN1P18031 435 aaKnown RBP12.51□□□□□ -0.41
SMAD3-206ENST00000558739 ZNF132P52740 706 aa12.51□□□□□ -0.41
SMAD3-206ENST00000558739 ERVPABLB-1P60509 514 aa12.51□□□□□ -0.41
SMAD3-206ENST00000558739 SKOR1P84550 965 aa12.51□□□□□ -0.41
SMAD3-206ENST00000558739 CLN3Q13286 438 aa12.51□□□□□ -0.41
SMAD3-206ENST00000558739 CDCP2Q5VXM1 449 aa12.51□□□□□ -0.41
SMAD3-206ENST00000558739 KIAA0895LQ68EN5 471 aa12.51□□□□□ -0.41
SMAD3-206ENST00000558739 ANKS1BQ7Z6G8 1248 aa12.51□□□□□ -0.41
SMAD3-206ENST00000558739 SPATS2Q86XZ4 545 aaKnown RBP12.51□□□□□ -0.41
SMAD3-206ENST00000558739 KRI1Q8N9T8 703 aaKnown RBP12.51□□□□□ -0.41
SMAD3-206ENST00000558739 MMS19Q96T76 1030 aa12.51□□□□□ -0.41
SMAD3-206ENST00000558739 POLR1BQ9H9Y6 1135 aa12.51□□□□□ -0.41
SMAD3-206ENST00000558739 GDF3Q9NR23 364 aa12.51□□□□□ -0.41
SMAD3-206ENST00000558739 AASDHPPTQ9NRN7 309 aa12.51□□□□□ -0.41
SMAD3-206ENST00000558739 IL37Q9NZH6 218 aa12.51□□□□□ -0.41
SMAD3-206ENST00000558739 SATB2Q9UPW6 733 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms