RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 LUC7L2Q9Y383 392 aaKnown RBP16.24■□□□□ 0.19
LINC01220-201ENST00000558575 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.24■□□□□ 0.19
LINC01220-201ENST00000558575 OBSL1O75147 1896 aa16.24■□□□□ 0.19
LINC01220-201ENST00000558575 MAST4O15021 2626 aa16.24■□□□□ 0.19
LINC01220-201ENST00000558575 FOXD2O60548 495 aaPredicted RBP16.23■□□□□ 0.19
LINC01220-201ENST00000558575 FBXO21O94952 628 aa16.23■□□□□ 0.19
LINC01220-201ENST00000558575 LSM8O95777 96 aaKnown RBP16.23■□□□□ 0.19
LINC01220-201ENST00000558575 HOXC13P31276 330 aa16.23■□□□□ 0.19
LINC01220-201ENST00000558575 GABRB2P47870 512 aa16.23■□□□□ 0.19
LINC01220-201ENST00000558575 GOLGA8FQ08AF8 430 aa16.23■□□□□ 0.19
LINC01220-201ENST00000558575 GOLGA8DPQ0D2H9 430 aa16.23■□□□□ 0.19
LINC01220-201ENST00000558575 FCHO2Q0JRZ9 810 aa16.23■□□□□ 0.19
LINC01220-201ENST00000558575 C2CD6Q53TS8 623 aa16.23■□□□□ 0.19
LINC01220-201ENST00000558575 SH3RF2Q8TEC5 729 aa16.23■□□□□ 0.19
LINC01220-201ENST00000558575 EDEM1Q92611 657 aa16.23■□□□□ 0.19
LINC01220-201ENST00000558575 SYN2Q92777 582 aaPredicted RBP16.23■□□□□ 0.19
LINC01220-201ENST00000558575 E2F7Q96AV8 911 aa16.23■□□□□ 0.19
LINC01220-201ENST00000558575 IQCDQ96DY2 449 aa16.23■□□□□ 0.19
LINC01220-201ENST00000558575 KLF16Q9BXK1 252 aaPredicted RBP16.23■□□□□ 0.19
LINC01220-201ENST00000558575 HAUS4Q9H6D7 363 aa16.23■□□□□ 0.19
LINC01220-201ENST00000558575 SMPD4Q9NXE4 827 aa16.23■□□□□ 0.19
LINC01220-201ENST00000558575 CPQQ9Y646 472 aa16.23■□□□□ 0.19
LINC01220-201ENST00000558575 SRRM3A6NNA2 597 aaPredicted RBP16.22■□□□□ 0.19
LINC01220-201ENST00000558575 CCDC172P0C7W6 258 aa16.22■□□□□ 0.19
LINC01220-201ENST00000558575 MBL2P11226 248 aaPredicted RBP16.22■□□□□ 0.19
LINC01220-201ENST00000558575 TCF3P15923 654 aa16.22■□□□□ 0.19
LINC01220-201ENST00000558575 PSMC3P17980 439 aa16.22■□□□□ 0.19
LINC01220-201ENST00000558575 SPINK2P20155 84 aa16.22■□□□□ 0.19
LINC01220-201ENST00000558575 ATP5C1P36542 298 aaKnown RBP16.22■□□□□ 0.19
LINC01220-201ENST00000558575 PTP4A2Q12974 167 aa16.22■□□□□ 0.19
LINC01220-201ENST00000558575 PPP2R5DQ14738 602 aa16.22■□□□□ 0.19
LINC01220-201ENST00000558575 ZNF77Q15935 545 aa16.22■□□□□ 0.19
LINC01220-201ENST00000558575 CLEC16AQ2KHT3 1053 aa16.22■□□□□ 0.19
LINC01220-201ENST00000558575 STPG1Q5TH74 334 aa16.22■□□□□ 0.19
LINC01220-201ENST00000558575 KLHDC10Q6PID8 442 aa16.22■□□□□ 0.19
LINC01220-201ENST00000558575 FAM183BPQ6ZVS7 135 aa16.22■□□□□ 0.19
LINC01220-201ENST00000558575 ARHGAP18Q8N392 663 aa16.22■□□□□ 0.19
LINC01220-201ENST00000558575 SLC30A5Q8TAD4 765 aa16.22■□□□□ 0.19
LINC01220-201ENST00000558575 BPIFB1Q8TDL5 484 aa16.22■□□□□ 0.19
LINC01220-201ENST00000558575 DNASE1L2Q92874 299 aa16.22■□□□□ 0.19
LINC01220-201ENST00000558575 IER2Q9BTL4 223 aa16.22■□□□□ 0.19
LINC01220-201ENST00000558575 LMAN1LQ9HAT1 526 aa16.22■□□□□ 0.19
LINC01220-201ENST00000558575 WASF3Q9UPY6 502 aa16.22■□□□□ 0.19
LINC01220-201ENST00000558575 K7ESF4 209 aa16.21■□□□□ 0.19
LINC01220-201ENST00000558575 LEFTY2O00292 366 aa16.21■□□□□ 0.19
LINC01220-201ENST00000558575 ARNTLO00327 626 aa16.21■□□□□ 0.19
LINC01220-201ENST00000558575 DDX3XO00571 662 aaKnown RBP eCLIP16.21■□□□□ 0.19
LINC01220-201ENST00000558575 GREM1O60565 184 aa16.21■□□□□ 0.19
LINC01220-201ENST00000558575 LTFP02788 710 aa16.21■□□□□ 0.19
LINC01220-201ENST00000558575 PLEKP08567 350 aaPredicted RBP16.21■□□□□ 0.19
LINC01220-201ENST00000558575 RALAP11233 206 aa16.21■□□□□ 0.19
LINC01220-201ENST00000558575 MMP8P22894 467 aa16.21■□□□□ 0.19
LINC01220-201ENST00000558575 HNRNPH3P31942 346 aaKnown RBP16.21■□□□□ 0.19
LINC01220-201ENST00000558575 CXCL12P48061 93 aa16.21■□□□□ 0.19
LINC01220-201ENST00000558575 RING1Q06587 406 aa16.21■□□□□ 0.19
LINC01220-201ENST00000558575 USP4Q13107 963 aa16.21■□□□□ 0.19
LINC01220-201ENST00000558575 ARID5BQ14865 1188 aa16.21■□□□□ 0.19
LINC01220-201ENST00000558575 C10orf120Q5SQS8 335 aa16.21■□□□□ 0.19
LINC01220-201ENST00000558575 SYPL2Q5VXT5 272 aa16.21■□□□□ 0.19
LINC01220-201ENST00000558575 BTBD8Q5XKL5 378 aa16.21■□□□□ 0.19
LINC01220-201ENST00000558575 OR6B2Q6IFH4 312 aa16.21■□□□□ 0.19
LINC01220-201ENST00000558575 PSAPL1Q6NUJ1 521 aa16.21■□□□□ 0.19
LINC01220-201ENST00000558575 WDR59Q6PJI9 974 aa16.21■□□□□ 0.19
LINC01220-201ENST00000558575 OLFML1Q6UWY5 402 aa16.21■□□□□ 0.19
LINC01220-201ENST00000558575 TRIM72Q6ZMU5 477 aa16.21■□□□□ 0.19
LINC01220-201ENST00000558575 ERICH1Q86X53 443 aa16.21■□□□□ 0.19
LINC01220-201ENST00000558575 XYLT1Q86Y38 959 aa16.21■□□□□ 0.19
LINC01220-201ENST00000558575 DEPDC1BQ8WUY9 529 aa16.21■□□□□ 0.19
LINC01220-201ENST00000558575 C18orf8Q96DM3 657 aa16.21■□□□□ 0.19
LINC01220-201ENST00000558575 MRFAP1L1Q96HT8 127 aa16.21■□□□□ 0.19
LINC01220-201ENST00000558575 ZFYVE19Q96K21 471 aa16.21■□□□□ 0.19
LINC01220-201ENST00000558575 NOX5Q96PH1 765 aa16.21■□□□□ 0.19
LINC01220-201ENST00000558575 FAM83CQ9BQN1 747 aa16.21■□□□□ 0.19
LINC01220-201ENST00000558575 TRMT61BQ9BVS5 477 aaKnown RBP16.21■□□□□ 0.19
LINC01220-201ENST00000558575 NUCKS1Q9H1E3 243 aaKnown RBP16.21■□□□□ 0.19
LINC01220-201ENST00000558575 LINC00597Q9H2U6 94 aa16.21■□□□□ 0.19
LINC01220-201ENST00000558575 ABCC13Q9NSE7 274 aa16.21■□□□□ 0.19
LINC01220-201ENST00000558575 TAS2R14Q9NYV8 317 aa16.21■□□□□ 0.19
LINC01220-201ENST00000558575 DNMT3LQ9UJW3 386 aa16.21■□□□□ 0.19
LINC01220-201ENST00000558575 LHX6Q9UPM6 363 aa16.21■□□□□ 0.19
LINC01220-201ENST00000558575 NAALADL1Q9UQQ1 740 aa16.21■□□□□ 0.19
LINC01220-201ENST00000558575 CEP83Q9Y592 693 aa16.21■□□□□ 0.19
LINC01220-201ENST00000558575 MAN2B1O00754 1011 aa16.2■□□□□ 0.18
LINC01220-201ENST00000558575 DPYSL4O14531 572 aa16.2■□□□□ 0.18
LINC01220-201ENST00000558575 TOP3BO95985 862 aaKnown RBP16.2■□□□□ 0.18
LINC01220-201ENST00000558575 TNFAIP3P21580 790 aa16.2■□□□□ 0.18
LINC01220-201ENST00000558575 GDI1P31150 447 aa16.2■□□□□ 0.18
LINC01220-201ENST00000558575 SLC6A3Q01959 620 aa16.2■□□□□ 0.18
LINC01220-201ENST00000558575 KLHL30Q0D2K2 578 aa16.2■□□□□ 0.18
LINC01220-201ENST00000558575 EFEMP1Q12805 493 aa16.2■□□□□ 0.18
LINC01220-201ENST00000558575 HEATR6Q6AI08 1181 aaKnown RBP16.2■□□□□ 0.18
LINC01220-201ENST00000558575 TMC6Q7Z403 805 aa16.2■□□□□ 0.18
LINC01220-201ENST00000558575 DNAAF5Q86Y56 855 aa16.2■□□□□ 0.18
LINC01220-201ENST00000558575 ZNF397Q8NF99 534 aaPredicted RBP16.2■□□□□ 0.18
LINC01220-201ENST00000558575 DNAJC7Q99615 494 aa16.2■□□□□ 0.18
LINC01220-201ENST00000558575 ARRDC1-AS1Q9H2J1 176 aa16.2■□□□□ 0.18
LINC01220-201ENST00000558575 KIF9Q9HAQ2 790 aa16.2■□□□□ 0.18
LINC01220-201ENST00000558575 C2orf42Q9NWW7 574 aa16.2■□□□□ 0.18
LINC01220-201ENST00000558575 CFAP97Q9P2B7 532 aa16.2■□□□□ 0.18
LINC01220-201ENST00000558575 SFMBT1Q9UHJ3 866 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms