RNA–Protein interactions for RNA: ENST00000557966.1

AC027088.1-201, humanhuman

TSL 2 BASIC

Gene AC027088.1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027088.1-201ENST00000557966 RNF139Q8WU17 664 aa16.94■□□□□ 0.3
AC027088.1-201ENST00000557966 ERLEC1Q96DZ1 483 aa16.94■□□□□ 0.3
AC027088.1-201ENST00000557966 GABRG3Q99928 467 aa16.94■□□□□ 0.3
AC027088.1-201ENST00000557966 CLSTN2Q9H4D0 955 aa16.94■□□□□ 0.3
AC027088.1-201ENST00000557966 ACP6Q9NPH0 428 aa16.94■□□□□ 0.3
AC027088.1-201ENST00000557966 ABCC13Q9NSE7 274 aa16.94■□□□□ 0.3
AC027088.1-201ENST00000557966 CACNA2D2Q9NY47 1150 aa16.94■□□□□ 0.3
AC027088.1-201ENST00000557966 BCCIPQ9P287 314 aaKnown RBP eCLIP16.94■□□□□ 0.3
AC027088.1-201ENST00000557966 MBD1Q9UIS9 605 aaPredicted RBP16.94■□□□□ 0.3
AC027088.1-201ENST00000557966 HBS1LQ9Y450 684 aaKnown RBP16.94■□□□□ 0.3
AC027088.1-201ENST00000557966 RAD54BQ9Y620 910 aa16.94■□□□□ 0.3
AC027088.1-201ENST00000557966 SPAG17Q6Q759 2223 aa16.94■□□□□ 0.3
AC027088.1-201ENST00000557966 GFRA2O00451 464 aa16.93■□□□□ 0.3
AC027088.1-201ENST00000557966 FGFR1OPO95684 399 aaKnown RBP16.93■□□□□ 0.3
AC027088.1-201ENST00000557966 KRT5P13647 590 aa16.93■□□□□ 0.3
AC027088.1-201ENST00000557966 SLC9A1P19634 815 aa16.93■□□□□ 0.3
AC027088.1-201ENST00000557966 MSANTD2Q6P1R3 559 aa16.93■□□□□ 0.3
AC027088.1-201ENST00000557966 DENND1BQ6P3S1 775 aa16.93■□□□□ 0.3
AC027088.1-201ENST00000557966 TRIM65Q6PJ69 517 aa16.93■□□□□ 0.3
AC027088.1-201ENST00000557966 C11orf74Q86VG3 221 aa16.93■□□□□ 0.3
AC027088.1-201ENST00000557966 C12orf50Q8NA57 414 aaPredicted RBP16.93■□□□□ 0.3
AC027088.1-201ENST00000557966 IRGQQ8WZA9 623 aa16.93■□□□□ 0.3
AC027088.1-201ENST00000557966 CRACR2AQ9BSW2 395 aa16.93■□□□□ 0.3
AC027088.1-201ENST00000557966 UBE2TQ9NPD8 197 aaPredicted RBP16.93■□□□□ 0.3
AC027088.1-201ENST00000557966 VPS45Q9NRW7 570 aa16.93■□□□□ 0.3
AC027088.1-201ENST00000557966 SLC27A6Q9Y2P4 619 aa16.93■□□□□ 0.3
AC027088.1-201ENST00000557966 BECN2A8MW95 431 aa16.92■□□□□ 0.3
AC027088.1-201ENST00000557966 WASH3PC4AMC7 463 aa16.92■□□□□ 0.3
AC027088.1-201ENST00000557966 FOXD2O60548 495 aaPredicted RBP16.92■□□□□ 0.3
AC027088.1-201ENST00000557966 GPD2P43304 727 aa16.92■□□□□ 0.3
AC027088.1-201ENST00000557966 RPL34P49207 117 aaKnown RBP16.92■□□□□ 0.3
AC027088.1-201ENST00000557966 PGBD3Q8N328 593 aa16.92■□□□□ 0.3
AC027088.1-201ENST00000557966 IPO4Q8TEX9 1081 aaKnown RBP16.92■□□□□ 0.3
AC027088.1-201ENST00000557966 PIWIL1Q96J94 861 aaKnown RBP16.92■□□□□ 0.3
AC027088.1-201ENST00000557966 SPACA7Q96KW9 195 aa16.92■□□□□ 0.3
AC027088.1-201ENST00000557966 HSFY1Q96LI6 401 aa16.92■□□□□ 0.3
AC027088.1-201ENST00000557966 MIS12Q9H081 205 aa16.92■□□□□ 0.3
AC027088.1-201ENST00000557966 SLC6A17Q9H1V8 727 aa16.92■□□□□ 0.3
AC027088.1-201ENST00000557966 CALCOCO1Q9P1Z2 691 aa16.92■□□□□ 0.3
AC027088.1-201ENST00000557966 CYTH4Q9UIA0 394 aa16.92■□□□□ 0.3
AC027088.1-201ENST00000557966 STOML2Q9UJZ1 356 aa16.92■□□□□ 0.3
AC027088.1-201ENST00000557966 AJAP1Q9UKB5 411 aaPredicted RBP16.92■□□□□ 0.3
AC027088.1-201ENST00000557966 RALGAPA1Q6GYQ0 2036 aa16.92■□□□□ 0.3
AC027088.1-201ENST00000557966 TSPAN3O60637 253 aa16.91■□□□□ 0.3
AC027088.1-201ENST00000557966 CAVIN2O95810 425 aa16.91■□□□□ 0.3
AC027088.1-201ENST00000557966 IGLV3-27P01718 113 aa16.91■□□□□ 0.3
AC027088.1-201ENST00000557966 LTFP02788 710 aa16.91■□□□□ 0.3
AC027088.1-201ENST00000557966 FYNP06241 537 aa16.91■□□□□ 0.3
AC027088.1-201ENST00000557966 NDUFV2P19404 249 aa16.91■□□□□ 0.3
AC027088.1-201ENST00000557966 HOXD9P28356 352 aaPredicted RBP16.91■□□□□ 0.3
AC027088.1-201ENST00000557966 DHPSP49366 369 aaPredicted RBP16.91■□□□□ 0.3
AC027088.1-201ENST00000557966 SGSHP51688 502 aa16.91■□□□□ 0.3
AC027088.1-201ENST00000557966 LIMK1P53667 647 aa16.91■□□□□ 0.3
AC027088.1-201ENST00000557966 DPCR1Q3MIW9 517 aa16.91■□□□□ 0.3
AC027088.1-201ENST00000557966 ARMCX6Q7L4S7 300 aa16.91■□□□□ 0.3
AC027088.1-201ENST00000557966 CREBRFQ8IUR6 639 aa16.91■□□□□ 0.3
AC027088.1-201ENST00000557966 MLKLQ8NB16 471 aa16.91■□□□□ 0.3
AC027088.1-201ENST00000557966 DDI1Q8WTU0 396 aa16.91■□□□□ 0.3
AC027088.1-201ENST00000557966 CD93Q9NPY3 652 aa16.91■□□□□ 0.3
AC027088.1-201ENST00000557966 PLXND1Q9Y4D7 1925 aa16.91■□□□□ 0.3
AC027088.1-201ENST00000557966 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.9■□□□□ 0.3
AC027088.1-201ENST00000557966 PATE3B3GLJ2 98 aa16.9■□□□□ 0.3
AC027088.1-201ENST00000557966 LETM1O95202 739 aaPredicted RBP16.9■□□□□ 0.3
AC027088.1-201ENST00000557966 CYBBP04839 570 aa16.9■□□□□ 0.3
AC027088.1-201ENST00000557966 GNA15P30679 374 aa16.9■□□□□ 0.3
AC027088.1-201ENST00000557966 IL12RB1P42701 662 aa16.9■□□□□ 0.3
AC027088.1-201ENST00000557966 PTGER3P43115 390 aa16.9■□□□□ 0.3
AC027088.1-201ENST00000557966 HARS2P49590 506 aaKnown RBP16.9■□□□□ 0.3
AC027088.1-201ENST00000557966 ARHGAP44Q17R89 818 aa16.9■□□□□ 0.3
AC027088.1-201ENST00000557966 TMEM215Q68D42 235 aa16.9■□□□□ 0.3
AC027088.1-201ENST00000557966 GBP6Q6ZN66 633 aa16.9■□□□□ 0.3
AC027088.1-201ENST00000557966 CYP2U1Q7Z449 544 aa16.9■□□□□ 0.3
AC027088.1-201ENST00000557966 ANKS1BQ7Z6G8 1248 aa16.9■□□□□ 0.3
AC027088.1-201ENST00000557966 TMEFF1Q8IYR6 380 aa16.9■□□□□ 0.3
AC027088.1-201ENST00000557966 APEX2Q9UBZ4 518 aa16.9■□□□□ 0.3
AC027088.1-201ENST00000557966 STON1Q9Y6Q2 735 aa16.9■□□□□ 0.3
AC027088.1-201ENST00000557966 TNRC6BQ9UPQ9 1833 aaKnown RBP16.9■□□□□ 0.3
AC027088.1-201ENST00000557966 SDK1Q7Z5N4 2213 aa16.9■□□□□ 0.3
AC027088.1-201ENST00000557966 THAP12O43422 761 aa16.89■□□□□ 0.29
AC027088.1-201ENST00000557966 FBXO21O94952 628 aa16.89■□□□□ 0.29
AC027088.1-201ENST00000557966 LATS1O95835 1130 aa16.89■□□□□ 0.29
AC027088.1-201ENST00000557966 MTIF2P46199 727 aaKnown RBP16.89■□□□□ 0.29
AC027088.1-201ENST00000557966 MEA1Q16626 185 aa16.89■□□□□ 0.29
AC027088.1-201ENST00000557966 MPPE1Q53F39 396 aa16.89■□□□□ 0.29
AC027088.1-201ENST00000557966 STPG1Q5TH74 334 aa16.89■□□□□ 0.29
AC027088.1-201ENST00000557966 SDE2Q6IQ49 451 aa16.89■□□□□ 0.29
AC027088.1-201ENST00000557966 ENOSF1Q7L5Y1 443 aa16.89■□□□□ 0.29
AC027088.1-201ENST00000557966 ABCA7Q8IZY2 2146 aa16.89■□□□□ 0.29
AC027088.1-201ENST00000557966 DQX1Q8TE96 717 aaKnown RBP16.89■□□□□ 0.29
AC027088.1-201ENST00000557966 ZNF606Q8WXB4 792 aa16.89■□□□□ 0.29
AC027088.1-201ENST00000557966 SORCS1Q8WY21 1168 aa16.89■□□□□ 0.29
AC027088.1-201ENST00000557966 EDEM2Q9BV94 578 aa16.89■□□□□ 0.29
AC027088.1-201ENST00000557966 SLC4A5Q9BY07 1137 aa16.89■□□□□ 0.29
AC027088.1-201ENST00000557966 SIX2Q9NPC8 291 aa16.89■□□□□ 0.29
AC027088.1-201ENST00000557966 ST7Q9NRC1 585 aa16.89■□□□□ 0.29
AC027088.1-201ENST00000557966 THAP10Q9P2Z0 257 aaPredicted RBP16.89■□□□□ 0.29
AC027088.1-201ENST00000557966 TJP2Q9UDY2 1190 aa16.89■□□□□ 0.29
AC027088.1-201ENST00000557966 ATXN2Q99700 1313 aaKnown RBP16.89■□□□□ 0.29
AC027088.1-201ENST00000557966 MUC22E2RYF6 1773 aaPredicted RBP16.89■□□□□ 0.29
AC027088.1-201ENST00000557966 MYO18AQ92614 2054 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms