RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 HARS2P49590 506 aaKnown RBP22.13■■□□□ 1.13
CASC4-204ENST00000557945 ZNF143P52747 638 aaPredicted RBP22.13■■□□□ 1.13
CASC4-204ENST00000557945 OGDHQ02218 1023 aa22.13■■□□□ 1.13
CASC4-204ENST00000557945 NNTQ13423 1086 aa22.13■■□□□ 1.13
CASC4-204ENST00000557945 OTUD1Q5VV17 481 aaPredicted RBP22.13■■□□□ 1.13
CASC4-204ENST00000557945 SND1Q7KZF4 910 aaKnown RBP eCLIP22.13■■□□□ 1.13
CASC4-204ENST00000557945 ZNF564Q8TBZ8 553 aaPredicted RBP22.13■■□□□ 1.13
CASC4-204ENST00000557945 NECAB3Q96P71 396 aaPredicted RBP22.13■■□□□ 1.13
CASC4-204ENST00000557945 PPP1R9BQ96SB3 815 aa22.13■■□□□ 1.13
CASC4-204ENST00000557945 CNPY3Q9BT09 278 aa22.13■■□□□ 1.13
CASC4-204ENST00000557945 TRMT61BQ9BVS5 477 aaKnown RBP22.13■■□□□ 1.13
CASC4-204ENST00000557945 ADAM33Q9BZ11 813 aa22.13■■□□□ 1.13
CASC4-204ENST00000557945 UVRAGQ9P2Y5 699 aa22.13■■□□□ 1.13
CASC4-204ENST00000557945 ANAPC7Q9UJX3 599 aa22.13■■□□□ 1.13
CASC4-204ENST00000557945 CCP110O43303 1012 aa22.12■■□□□ 1.13
CASC4-204ENST00000557945 RDXP35241 583 aaKnown RBP22.12■■□□□ 1.13
CASC4-204ENST00000557945 ZC3H12AQ5D1E8 599 aaKnown RBP22.12■■□□□ 1.13
CASC4-204ENST00000557945 GJD3Q8N144 294 aa22.12■■□□□ 1.13
CASC4-204ENST00000557945 SLC44A3Q8N4M1 653 aa22.12■■□□□ 1.13
CASC4-204ENST00000557945 FAM172AQ8WUF8 416 aa22.12■■□□□ 1.13
CASC4-204ENST00000557945 FCRL2Q96LA5 508 aaPredicted RBP22.12■■□□□ 1.13
CASC4-204ENST00000557945 ZNF830Q96NB3 372 aaPredicted RBP22.12■■□□□ 1.13
CASC4-204ENST00000557945 DCLK3Q9C098 648 aa22.12■■□□□ 1.13
CASC4-204ENST00000557945 PIGVQ9NUD9 493 aa22.12■■□□□ 1.13
CASC4-204ENST00000557945 CALCOCO1Q9P1Z2 691 aa22.12■■□□□ 1.13
CASC4-204ENST00000557945 HELZP42694 1942 aaKnown RBP22.12■■□□□ 1.13
CASC4-204ENST00000557945 IGLV3-27P01718 113 aa22.12■■□□□ 1.13
CASC4-204ENST00000557945 APOEP02649 317 aa22.12■■□□□ 1.13
CASC4-204ENST00000557945 GDI1P31150 447 aa22.12■■□□□ 1.13
CASC4-204ENST00000557945 IFNAR2P48551 515 aa22.12■■□□□ 1.13
CASC4-204ENST00000557945 ATXN1P54253 815 aaKnown RBP22.12■■□□□ 1.13
CASC4-204ENST00000557945 RING1Q06587 406 aa22.12■■□□□ 1.13
CASC4-204ENST00000557945 SH3PXD2AQ5TCZ1 1133 aa22.12■■□□□ 1.13
CASC4-204ENST00000557945 NUGGCQ68CJ6 796 aa22.12■■□□□ 1.13
CASC4-204ENST00000557945 HTR3DQ70Z44 454 aa22.12■■□□□ 1.13
CASC4-204ENST00000557945 DENND1CQ8IV53 801 aa22.12■■□□□ 1.13
CASC4-204ENST00000557945 UNC45BQ8IWX7 931 aa22.12■■□□□ 1.13
CASC4-204ENST00000557945 RHOT2Q8IXI1 618 aa22.12■■□□□ 1.13
CASC4-204ENST00000557945 SLC35G2Q8TBE7 412 aa22.12■■□□□ 1.13
CASC4-204ENST00000557945 RFFLQ8WZ73 363 aa22.12■■□□□ 1.13
CASC4-204ENST00000557945 PGAP3Q96FM1 320 aaPredicted RBP22.12■■□□□ 1.13
CASC4-204ENST00000557945 SLC39A13Q96H72 371 aa22.12■■□□□ 1.13
CASC4-204ENST00000557945 ZFYVE19Q96K21 471 aa22.12■■□□□ 1.13
CASC4-204ENST00000557945 BTBD6Q96KE9 485 aa22.12■■□□□ 1.13
CASC4-204ENST00000557945 OSGEPQ9NPF4 335 aa22.12■■□□□ 1.13
CASC4-204ENST00000557945 DUS2Q9NX74 493 aaKnown RBP22.12■■□□□ 1.13
CASC4-204ENST00000557945 WNT6Q9Y6F9 365 aa22.12■■□□□ 1.13
CASC4-204ENST00000557945 MYO1FO00160 1098 aa22.11■■□□□ 1.13
CASC4-204ENST00000557945 MOCS2O96007 188 aaPredicted RBP22.11■■□□□ 1.13
CASC4-204ENST00000557945 KLKB1P03952 638 aa22.11■■□□□ 1.13
CASC4-204ENST00000557945 CCR1P32246 355 aa22.11■■□□□ 1.13
CASC4-204ENST00000557945 NOP2P46087 812 aaKnown RBP22.11■■□□□ 1.13
CASC4-204ENST00000557945 VAV2P52735 878 aa22.11■■□□□ 1.13
CASC4-204ENST00000557945 FCHO2Q0JRZ9 810 aa22.11■■□□□ 1.13
CASC4-204ENST00000557945 TDGQ13569 410 aa22.11■■□□□ 1.13
CASC4-204ENST00000557945 ARHGAP29Q52LW3 1261 aa22.11■■□□□ 1.13
CASC4-204ENST00000557945 STRADAQ7RTN6 431 aa22.11■■□□□ 1.13
CASC4-204ENST00000557945 RNF135Q8IUD6 432 aa22.11■■□□□ 1.13
CASC4-204ENST00000557945 BBS7Q8IWZ6 715 aa22.11■■□□□ 1.13
CASC4-204ENST00000557945 TXLNBQ8N3L3 684 aa22.11■■□□□ 1.13
CASC4-204ENST00000557945 FNIP1Q8TF40 1166 aa22.11■■□□□ 1.13
CASC4-204ENST00000557945 WDCPQ9H6R7 721 aa22.11■■□□□ 1.13
CASC4-204ENST00000557945 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.11■■□□□ 1.13
CASC4-204ENST00000557945 ADGRG1Q9Y653 693 aa22.11■■□□□ 1.13
CASC4-204ENST00000557945 RCCD1A6NED2 376 aa22.1■■□□□ 1.13
CASC4-204ENST00000557945 SLC9A3R1O14745 358 aaPredicted RBP22.1■■□□□ 1.13
CASC4-204ENST00000557945 GREM1O60565 184 aa22.1■■□□□ 1.13
CASC4-204ENST00000557945 SLC2A3P11169 496 aa22.1■■□□□ 1.13
CASC4-204ENST00000557945 CXCR3P49682 368 aa22.1■■□□□ 1.13
CASC4-204ENST00000557945 ZNF252P-AS1Q0IIN9 211 aa22.1■■□□□ 1.13
CASC4-204ENST00000557945 EIF4EBP2Q13542 120 aaPredicted RBP22.1■■□□□ 1.13
CASC4-204ENST00000557945 RAB6CQ53S08 254 aa22.1■■□□□ 1.13
CASC4-204ENST00000557945 FAM131BQ86XD5 332 aa22.1■■□□□ 1.13
CASC4-204ENST00000557945 OSCP1Q8WVF1 389 aa22.1■■□□□ 1.13
CASC4-204ENST00000557945 CENPIQ92674 756 aaPredicted RBP22.1■■□□□ 1.13
CASC4-204ENST00000557945 RAB6CQ9H0N0 254 aa22.1■■□□□ 1.13
CASC4-204ENST00000557945 LINC00597Q9H2U6 94 aa22.1■■□□□ 1.13
CASC4-204ENST00000557945 KCNF1Q9H3M0 494 aa22.1■■□□□ 1.13
CASC4-204ENST00000557945 BRD9Q9H8M2 597 aa22.1■■□□□ 1.13
CASC4-204ENST00000557945 TMEM51Q9NW97 253 aa22.1■■□□□ 1.13
CASC4-204ENST00000557945 TBC1D14Q9P2M4 693 aa22.1■■□□□ 1.13
CASC4-204ENST00000557945 IP6K2Q9UHH9 426 aa22.1■■□□□ 1.13
CASC4-204ENST00000557945 SLC12A6Q9UHW9 1150 aa22.1■■□□□ 1.13
CASC4-204ENST00000557945 AGO1Q9UL18 857 aaKnown RBP22.1■■□□□ 1.13
CASC4-204ENST00000557945 ZNF510Q9Y2H8 683 aa22.1■■□□□ 1.13
CASC4-204ENST00000557945 PAXBP1Q9Y5B6 917 aa22.1■■□□□ 1.13
CASC4-204ENST00000557945 TMEM110-MUSTN1A8MSY1 372 aa22.09■■□□□ 1.13
CASC4-204ENST00000557945 CHADO15335 359 aa22.09■■□□□ 1.13
CASC4-204ENST00000557945 RNF8O76064 485 aa22.09■■□□□ 1.13
CASC4-204ENST00000557945 ENDOD1O94919 500 aa22.09■■□□□ 1.13
CASC4-204ENST00000557945 SLC11A2P49281 568 aa22.09■■□□□ 1.13
CASC4-204ENST00000557945 HDAC4P56524 1084 aa22.09■■□□□ 1.13
CASC4-204ENST00000557945 PPP2R5DQ14738 602 aa22.09■■□□□ 1.13
CASC4-204ENST00000557945 TRIM68Q6AZZ1 485 aa22.09■■□□□ 1.13
CASC4-204ENST00000557945 SCYL2Q6P3W7 929 aa22.09■■□□□ 1.13
CASC4-204ENST00000557945 Q6ZNB5 142 aa22.09■■□□□ 1.13
CASC4-204ENST00000557945 BNIPLQ7Z465 357 aa22.09■■□□□ 1.13
CASC4-204ENST00000557945 KIAA1958Q8N8K9 716 aa22.09■■□□□ 1.13
CASC4-204ENST00000557945 ATP6V0D2Q8N8Y2 350 aa22.09■■□□□ 1.13
CASC4-204ENST00000557945 ASIC4Q96FT7 647 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms