RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 SOX9P48436 509 aa26.59■■□□□ 1.85
SMAD6-202ENST00000557916 SULT1E1P49888 294 aa26.59■■□□□ 1.85
SMAD6-202ENST00000557916 MLLT6P55198 1093 aaPredicted RBP26.59■■□□□ 1.85
SMAD6-202ENST00000557916 ASTE1Q2TB18 679 aaPredicted RBP26.59■■□□□ 1.85
SMAD6-202ENST00000557916 CCDC122Q5T0U0 273 aa26.59■■□□□ 1.85
SMAD6-202ENST00000557916 TRNP1Q6NT89 227 aa26.59■■□□□ 1.85
SMAD6-202ENST00000557916 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.59■■□□□ 1.85
SMAD6-202ENST00000557916 JOSD2Q8TAC2 188 aa26.59■■□□□ 1.85
SMAD6-202ENST00000557916 NT5C3BQ969T7 300 aa26.59■■□□□ 1.85
SMAD6-202ENST00000557916 SLC39A13Q96H72 371 aa26.59■■□□□ 1.85
SMAD6-202ENST00000557916 SHDQ96IW2 340 aa26.59■■□□□ 1.85
SMAD6-202ENST00000557916 FCRL2Q96LA5 508 aaPredicted RBP26.59■■□□□ 1.85
SMAD6-202ENST00000557916 CCDC42Q96M95 316 aa26.59■■□□□ 1.85
SMAD6-202ENST00000557916 NHEJ1Q9H9Q4 299 aaPredicted RBP26.59■■□□□ 1.85
SMAD6-202ENST00000557916 COX16Q9P0S2 106 aa26.59■■□□□ 1.85
SMAD6-202ENST00000557916 TICRRQ7Z2Z1 1910 aa26.59■■□□□ 1.85
SMAD6-202ENST00000557916 M0QYT0 321 aa26.58■■□□□ 1.85
SMAD6-202ENST00000557916 AKR1B10O60218 316 aa26.58■■□□□ 1.85
SMAD6-202ENST00000557916 CYP17A1P05093 508 aa26.58■■□□□ 1.85
SMAD6-202ENST00000557916 GFPT1Q06210 699 aaPredicted RBP26.58■■□□□ 1.85
SMAD6-202ENST00000557916 EIF4EBP2Q13542 120 aaPredicted RBP26.58■■□□□ 1.85
SMAD6-202ENST00000557916 DHCR24Q15392 516 aa26.58■■□□□ 1.85
SMAD6-202ENST00000557916 SLC25A52Q3SY17 297 aa26.58■■□□□ 1.85
SMAD6-202ENST00000557916 RHBDF2Q6PJF5 856 aa26.58■■□□□ 1.85
SMAD6-202ENST00000557916 TPRG1Q6ZUI0 275 aa26.58■■□□□ 1.85
SMAD6-202ENST00000557916 SPC24Q8NBT2 197 aa26.58■■□□□ 1.85
SMAD6-202ENST00000557916 ZNF653Q96CK0 615 aa26.58■■□□□ 1.85
SMAD6-202ENST00000557916 TRIM11Q96F44 468 aa26.58■■□□□ 1.85
SMAD6-202ENST00000557916 ATMINO43313 823 aaPredicted RBP26.57■■□□□ 1.84
SMAD6-202ENST00000557916 PDGFRAP16234 1089 aa26.57■■□□□ 1.84
SMAD6-202ENST00000557916 TFE3P19532 575 aaPredicted RBP26.57■■□□□ 1.84
SMAD6-202ENST00000557916 RFC1P35251 1148 aaPredicted RBP26.57■■□□□ 1.84
SMAD6-202ENST00000557916 NME3Q13232 169 aa26.57■■□□□ 1.84
SMAD6-202ENST00000557916 SLC18A3Q16572 532 aa26.57■■□□□ 1.84
SMAD6-202ENST00000557916 ZC3H12AQ5D1E8 599 aaKnown RBP26.57■■□□□ 1.84
SMAD6-202ENST00000557916 RXFP2Q8WXD0 754 aa26.57■■□□□ 1.84
SMAD6-202ENST00000557916 CFAP57Q96MR6 1250 aa26.57■■□□□ 1.84
SMAD6-202ENST00000557916 TBCBQ99426 244 aa26.57■■□□□ 1.84
SMAD6-202ENST00000557916 MFSD1Q9H3U5 465 aa26.57■■□□□ 1.84
SMAD6-202ENST00000557916 GRPEL1Q9HAV7 217 aa26.57■■□□□ 1.84
SMAD6-202ENST00000557916 SPHK2Q9NRA0 654 aa26.57■■□□□ 1.84
SMAD6-202ENST00000557916 PARVAQ9NVD7 372 aa26.57■■□□□ 1.84
SMAD6-202ENST00000557916 SLTMQ9NWH9 1034 aaKnown RBP eCLIP26.57■■□□□ 1.84
SMAD6-202ENST00000557916 IMPACTQ9P2X3 320 aa26.57■■□□□ 1.84
SMAD6-202ENST00000557916 CNOT8Q9UFF9 292 aaKnown RBP26.57■■□□□ 1.84
SMAD6-202ENST00000557916 COL4A2P08572 1712 aa26.57■■□□□ 1.84
SMAD6-202ENST00000557916 TECTAO75443 2155 aa26.57■■□□□ 1.84
SMAD6-202ENST00000557916 C2CD4BA6NLJ0 364 aa26.56■■□□□ 1.84
SMAD6-202ENST00000557916 SPECC1L-ADORA2AF8WAN1 911 aa26.56■■□□□ 1.84
SMAD6-202ENST00000557916 ADH1CP00326 375 aa26.56■■□□□ 1.84
SMAD6-202ENST00000557916 MYBL1P10243 752 aa26.56■■□□□ 1.84
SMAD6-202ENST00000557916 GJA4P35212 333 aa26.56■■□□□ 1.84
SMAD6-202ENST00000557916 STARD6P59095 220 aa26.56■■□□□ 1.84
SMAD6-202ENST00000557916 LY6G5CQ5SRR4 150 aa26.56■■□□□ 1.84
SMAD6-202ENST00000557916 PPP1R15BQ5SWA1 713 aa26.56■■□□□ 1.84
SMAD6-202ENST00000557916 OTUD1Q5VV17 481 aaPredicted RBP26.56■■□□□ 1.84
SMAD6-202ENST00000557916 PLEKHA7Q6IQ23 1121 aa26.56■■□□□ 1.84
SMAD6-202ENST00000557916 DCUN1D2Q6PH85 259 aa26.56■■□□□ 1.84
SMAD6-202ENST00000557916 RALGPS2Q86X27 583 aaPredicted RBP26.56■■□□□ 1.84
SMAD6-202ENST00000557916 RNF34Q969K3 372 aa26.56■■□□□ 1.84
SMAD6-202ENST00000557916 PANX2Q96RD6 677 aa26.56■■□□□ 1.84
SMAD6-202ENST00000557916 ADAM33Q9BZ11 813 aa26.56■■□□□ 1.84
SMAD6-202ENST00000557916 CALCOCO1Q9P1Z2 691 aa26.56■■□□□ 1.84
SMAD6-202ENST00000557916 NENFQ9UMX5 172 aa26.56■■□□□ 1.84
SMAD6-202ENST00000557916 ANKRD62A6NC57 917 aa26.56■■□□□ 1.84
SMAD6-202ENST00000557916 MAN2B1O00754 1011 aa26.56■■□□□ 1.84
SMAD6-202ENST00000557916 LATS1O95835 1130 aa26.56■■□□□ 1.84
SMAD6-202ENST00000557916 PDGFBP01127 241 aaPredicted RBP26.56■■□□□ 1.84
SMAD6-202ENST00000557916 APOEP02649 317 aa26.56■■□□□ 1.84
SMAD6-202ENST00000557916 SLC2A3P11169 496 aa26.56■■□□□ 1.84
SMAD6-202ENST00000557916 ABCB4P21439 1286 aa26.56■■□□□ 1.84
SMAD6-202ENST00000557916 SDC4P31431 198 aa26.56■■□□□ 1.84
SMAD6-202ENST00000557916 CTHP32929 405 aa26.56■■□□□ 1.84
SMAD6-202ENST00000557916 CHKAP35790 457 aa26.56■■□□□ 1.84
SMAD6-202ENST00000557916 SLC11A2P49281 568 aa26.56■■□□□ 1.84
SMAD6-202ENST00000557916 AMPD2Q01433 879 aa26.56■■□□□ 1.84
SMAD6-202ENST00000557916 MAMLD1Q13495 774 aa26.56■■□□□ 1.84
SMAD6-202ENST00000557916 AZIN2Q96A70 460 aa26.56■■□□□ 1.84
SMAD6-202ENST00000557916 PGAP3Q96FM1 320 aaPredicted RBP26.56■■□□□ 1.84
SMAD6-202ENST00000557916 MSANTD3Q96H12 275 aa26.56■■□□□ 1.84
SMAD6-202ENST00000557916 MCEEQ96PE7 176 aa26.56■■□□□ 1.84
SMAD6-202ENST00000557916 PIGVQ9NUD9 493 aa26.56■■□□□ 1.84
SMAD6-202ENST00000557916 STK25O00506 426 aa26.55■■□□□ 1.84
SMAD6-202ENST00000557916 F9P00740 461 aa26.55■■□□□ 1.84
SMAD6-202ENST00000557916 CD72P21854 359 aa26.55■■□□□ 1.84
SMAD6-202ENST00000557916 CCR1P32246 355 aa26.55■■□□□ 1.84
SMAD6-202ENST00000557916 RPL7AP62424 266 aaKnown RBP26.55■■□□□ 1.84
SMAD6-202ENST00000557916 DEUP1Q05D60 604 aa26.55■■□□□ 1.84
SMAD6-202ENST00000557916 CCDC14Q49A88 953 aa26.55■■□□□ 1.84
SMAD6-202ENST00000557916 ZNF852Q6ZMS4 543 aa26.55■■□□□ 1.84
SMAD6-202ENST00000557916 TPGS1Q6ZTW0 290 aa26.55■■□□□ 1.84
SMAD6-202ENST00000557916 SND1Q7KZF4 910 aaKnown RBP eCLIP26.55■■□□□ 1.84
SMAD6-202ENST00000557916 TMEM25Q86YD3 366 aa26.55■■□□□ 1.84
SMAD6-202ENST00000557916 TBC1D17Q9HA65 648 aa26.55■■□□□ 1.84
SMAD6-202ENST00000557916 MYO1AQ9UBC5 1043 aa26.55■■□□□ 1.84
SMAD6-202ENST00000557916 STOML2Q9UJZ1 356 aa26.55■■□□□ 1.84
SMAD6-202ENST00000557916 FAM86C2PA6NEL3 165 aa26.54■■□□□ 1.84
SMAD6-202ENST00000557916 SHISA7A6NL88 538 aa26.54■■□□□ 1.84
SMAD6-202ENST00000557916 ACSL4O60488 711 aa26.54■■□□□ 1.84
SMAD6-202ENST00000557916 MOCS2O96007 188 aaPredicted RBP26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms