RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 TLR6Q9Y2C9 796 aa15.91■□□□□ 0.14
NEDD1-213ENST00000557644 PSMA2P25787 234 aa15.91■□□□□ 0.14
NEDD1-213ENST00000557644 PTPN9P43378 593 aa15.91■□□□□ 0.14
NEDD1-213ENST00000557644 USP4Q13107 963 aa15.91■□□□□ 0.14
NEDD1-213ENST00000557644 TRIP4Q15650 581 aaPredicted RBP15.91■□□□□ 0.14
NEDD1-213ENST00000557644 ZC3H12AQ5D1E8 599 aaKnown RBP15.91■□□□□ 0.14
NEDD1-213ENST00000557644 MTSS1LQ765P7 747 aa15.91■□□□□ 0.14
NEDD1-213ENST00000557644 BNIPLQ7Z465 357 aa15.91■□□□□ 0.14
NEDD1-213ENST00000557644 FAM172AQ8WUF8 416 aa15.91■□□□□ 0.14
NEDD1-213ENST00000557644 ELSPBP1Q96BH3 223 aa15.91■□□□□ 0.14
NEDD1-213ENST00000557644 ZFYVE19Q96K21 471 aa15.91■□□□□ 0.14
NEDD1-213ENST00000557644 FCRL2Q96LA5 508 aaPredicted RBP15.91■□□□□ 0.14
NEDD1-213ENST00000557644 LUC7LQ9NQ29 371 aaKnown RBP15.91■□□□□ 0.14
NEDD1-213ENST00000557644 RRN3Q9NYV6 651 aa15.91■□□□□ 0.14
NEDD1-213ENST00000557644 UVRAGQ9P2Y5 699 aa15.91■□□□□ 0.14
NEDD1-213ENST00000557644 HBS1LQ9Y450 684 aaKnown RBP15.91■□□□□ 0.14
NEDD1-213ENST00000557644 NUP210Q8TEM1 1887 aaPredicted RBP15.9■□□□□ 0.14
NEDD1-213ENST00000557644 IGLV3-27P01718 113 aa15.9■□□□□ 0.14
NEDD1-213ENST00000557644 HDAC4P56524 1084 aa15.9■□□□□ 0.14
NEDD1-213ENST00000557644 DEUP1Q05D60 604 aa15.9■□□□□ 0.14
NEDD1-213ENST00000557644 BPIFB1Q8TDL5 484 aa15.9■□□□□ 0.14
NEDD1-213ENST00000557644 PGAP3Q96FM1 320 aaPredicted RBP15.9■□□□□ 0.14
NEDD1-213ENST00000557644 SLC39A13Q96H72 371 aa15.9■□□□□ 0.14
NEDD1-213ENST00000557644 NECAB3Q96P71 396 aaPredicted RBP15.9■□□□□ 0.14
NEDD1-213ENST00000557644 CNPY3Q9BT09 278 aa15.9■□□□□ 0.14
NEDD1-213ENST00000557644 ANLNQ9NQW6 1124 aa15.9■□□□□ 0.14
NEDD1-213ENST00000557644 ECI2O75521 394 aa15.9■□□□□ 0.14
NEDD1-213ENST00000557644 CORO1AP31146 461 aaKnown RBP15.9■□□□□ 0.14
NEDD1-213ENST00000557644 FAM131BQ86XD5 332 aa15.9■□□□□ 0.14
NEDD1-213ENST00000557644 CPNE8Q86YQ8 564 aa15.9■□□□□ 0.14
NEDD1-213ENST00000557644 ARFGAP1Q8N6T3 406 aa15.9■□□□□ 0.14
NEDD1-213ENST00000557644 FNIP1Q8TF40 1166 aa15.9■□□□□ 0.14
NEDD1-213ENST00000557644 CENPIQ92674 756 aaPredicted RBP15.9■□□□□ 0.14
NEDD1-213ENST00000557644 ASIC4Q96FT7 647 aa15.9■□□□□ 0.14
NEDD1-213ENST00000557644 KIF9Q9HAQ2 790 aa15.9■□□□□ 0.14
NEDD1-213ENST00000557644 TMPRSS4Q9NRS4 437 aa15.9■□□□□ 0.14
NEDD1-213ENST00000557644 XPO7Q9UIA9 1087 aaKnown RBP15.9■□□□□ 0.14
NEDD1-213ENST00000557644 SH3BP1Q9Y3L3 701 aa15.9■□□□□ 0.14
NEDD1-213ENST00000557644 I6L893 689 aaPredicted RBP15.89■□□□□ 0.13
NEDD1-213ENST00000557644 MOCS2O96007 188 aaPredicted RBP15.89■□□□□ 0.13
NEDD1-213ENST00000557644 GBP1P32455 592 aa15.89■□□□□ 0.13
NEDD1-213ENST00000557644 RDXP35241 583 aaKnown RBP15.89■□□□□ 0.13
NEDD1-213ENST00000557644 NNTQ13423 1086 aa15.89■□□□□ 0.13
NEDD1-213ENST00000557644 DENND1CQ8IV53 801 aa15.89■□□□□ 0.13
NEDD1-213ENST00000557644 MFSD6LQ8IWD5 586 aa15.89■□□□□ 0.13
NEDD1-213ENST00000557644 BBS7Q8IWZ6 715 aa15.89■□□□□ 0.13
NEDD1-213ENST00000557644 RHOT2Q8IXI1 618 aa15.89■□□□□ 0.13
NEDD1-213ENST00000557644 RNF34Q969K3 372 aa15.89■□□□□ 0.13
NEDD1-213ENST00000557644 PLD4Q96BZ4 506 aa15.89■□□□□ 0.13
NEDD1-213ENST00000557644 LINC00597Q9H2U6 94 aa15.89■□□□□ 0.13
NEDD1-213ENST00000557644 WNT6Q9Y6F9 365 aa15.89■□□□□ 0.13
NEDD1-213ENST00000557644 C19orf67A6NJJ6 358 aa15.89■□□□□ 0.13
NEDD1-213ENST00000557644 MYO1FO00160 1098 aa15.89■□□□□ 0.13
NEDD1-213ENST00000557644 ENDOD1O94919 500 aa15.89■□□□□ 0.13
NEDD1-213ENST00000557644 NOP2P46087 812 aaKnown RBP15.89■□□□□ 0.13
NEDD1-213ENST00000557644 TRIM68Q6AZZ1 485 aa15.89■□□□□ 0.13
NEDD1-213ENST00000557644 DDX42Q86XP3 938 aaKnown RBP eCLIP15.89■□□□□ 0.13
NEDD1-213ENST00000557644 CD320Q9NPF0 282 aa15.89■□□□□ 0.13
NEDD1-213ENST00000557644 OBP2AQ9NY56 170 aa15.89■□□□□ 0.13
NEDD1-213ENST00000557644 AGO1Q9UL18 857 aaKnown RBP15.89■□□□□ 0.13
NEDD1-213ENST00000557644 HELZP42694 1942 aaKnown RBP15.88■□□□□ 0.13
NEDD1-213ENST00000557644 TMEM110-MUSTN1A8MSY1 372 aa15.88■□□□□ 0.13
NEDD1-213ENST00000557644 PJA2O43164 708 aa15.88■□□□□ 0.13
NEDD1-213ENST00000557644 BUB1O43683 1085 aa15.88■□□□□ 0.13
NEDD1-213ENST00000557644 TCF3P15923 654 aa15.88■□□□□ 0.13
NEDD1-213ENST00000557644 PSMC3P17980 439 aa15.88■□□□□ 0.13
NEDD1-213ENST00000557644 HARS2P49590 506 aaKnown RBP15.88■□□□□ 0.13
NEDD1-213ENST00000557644 CXCR3P49682 368 aa15.88■□□□□ 0.13
NEDD1-213ENST00000557644 KPNA1P52294 538 aaPredicted RBP15.88■□□□□ 0.13
NEDD1-213ENST00000557644 RING1Q06587 406 aa15.88■□□□□ 0.13
NEDD1-213ENST00000557644 FCHO2Q0JRZ9 810 aa15.88■□□□□ 0.13
NEDD1-213ENST00000557644 HTR3DQ70Z44 454 aa15.88■□□□□ 0.13
NEDD1-213ENST00000557644 STRADAQ7RTN6 431 aa15.88■□□□□ 0.13
NEDD1-213ENST00000557644 SLC44A3Q8N4M1 653 aa15.88■□□□□ 0.13
NEDD1-213ENST00000557644 MYO10Q9HD67 2058 aa15.88■□□□□ 0.13
NEDD1-213ENST00000557644 E2F8A0AVK6 867 aa15.87■□□□□ 0.13
NEDD1-213ENST00000557644 KCNU1A8MYU2 1149 aa15.87■□□□□ 0.13
NEDD1-213ENST00000557644 MTA2O94776 668 aa15.87■□□□□ 0.13
NEDD1-213ENST00000557644 F9P00740 461 aa15.87■□□□□ 0.13
NEDD1-213ENST00000557644 CCDC175P0C221 793 aa15.87■□□□□ 0.13
NEDD1-213ENST00000557644 TCF4P15884 667 aa15.87■□□□□ 0.13
NEDD1-213ENST00000557644 CCR1P32246 355 aa15.87■□□□□ 0.13
NEDD1-213ENST00000557644 MESDQ14696 234 aa15.87■□□□□ 0.13
NEDD1-213ENST00000557644 Q6ZNB5 142 aa15.87■□□□□ 0.13
NEDD1-213ENST00000557644 E2F7Q96AV8 911 aa15.87■□□□□ 0.13
NEDD1-213ENST00000557644 TKTL2Q9H0I9 626 aa15.87■□□□□ 0.13
NEDD1-213ENST00000557644 GOLPH3Q9H4A6 298 aa15.87■□□□□ 0.13
NEDD1-213ENST00000557644 WDCPQ9H6R7 721 aa15.87■□□□□ 0.13
NEDD1-213ENST00000557644 IP6K2Q9UHH9 426 aa15.87■□□□□ 0.13
NEDD1-213ENST00000557644 PYCARDQ9ULZ3 195 aa15.87■□□□□ 0.13
NEDD1-213ENST00000557644 MACROD2A1Z1Q3 448 aa15.87■□□□□ 0.13
NEDD1-213ENST00000557644 LRCH4O75427 683 aa15.87■□□□□ 0.13
NEDD1-213ENST00000557644 GDI1P31150 447 aa15.87■□□□□ 0.13
NEDD1-213ENST00000557644 TNK2Q07912 1038 aa15.87■□□□□ 0.13
NEDD1-213ENST00000557644 KIF5AQ12840 1032 aa15.87■□□□□ 0.13
NEDD1-213ENST00000557644 TCEAL1Q15170 157 aa15.87■□□□□ 0.13
NEDD1-213ENST00000557644 NUGGCQ68CJ6 796 aa15.87■□□□□ 0.13
NEDD1-213ENST00000557644 CC2D1AQ6P1N0 951 aaPredicted RBP15.87■□□□□ 0.13
NEDD1-213ENST00000557644 SCYL2Q6P3W7 929 aa15.87■□□□□ 0.13
NEDD1-213ENST00000557644 SND1Q7KZF4 910 aaKnown RBP eCLIP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms