RNA–Protein interactions for RNA: ENST00000557640.1

RD3L-201, Transcript of retinal degeneration 3 like, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RD3L, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3L-201ENST00000557640 RAD54LQ92698 747 aa8.44□□□□□ -1.06
RD3L-201ENST00000557640 PNKPQ96T60 521 aa8.44□□□□□ -1.06
RD3L-201ENST00000557640 CBWD1Q9BRT8 395 aa8.44□□□□□ -1.06
RD3L-201ENST00000557640 FAM213AQ9BRX8 229 aa8.44□□□□□ -1.06
RD3L-201ENST00000557640 DPEP3Q9H4B8 488 aa8.44□□□□□ -1.06
RD3L-201ENST00000557640 ST6GALNAC4Q9H4F1 302 aa8.44□□□□□ -1.06
RD3L-201ENST00000557640 ZHX3Q9H4I2 956 aa8.44□□□□□ -1.06
RD3L-201ENST00000557640 IL21RQ9HBE5 538 aa8.44□□□□□ -1.06
RD3L-201ENST00000557640 PDE11AQ9HCR9 933 aa8.44□□□□□ -1.06
RD3L-201ENST00000557640 ARHGEF4Q9NR80 690 aa8.44□□□□□ -1.06
RD3L-201ENST00000557640 GDAP2Q9NXN4 497 aa8.44□□□□□ -1.06
RD3L-201ENST00000557640 CYP8B1Q9UNU6 501 aa8.44□□□□□ -1.06
RD3L-201ENST00000557640 LIMCH1Q9UPQ0 1083 aa8.44□□□□□ -1.06
RD3L-201ENST00000557640 SNX9Q9Y5X1 595 aa8.44□□□□□ -1.06
RD3L-201ENST00000557640 RAD54BQ9Y620 910 aa8.44□□□□□ -1.06
RD3L-201ENST00000557640 OAS3Q9Y6K5 1087 aaKnown RBP8.44□□□□□ -1.06
RD3L-201ENST00000557640 ZNF462Q96JM2 2506 aa8.44□□□□□ -1.06
RD3L-201ENST00000557640 F8VP50 259 aa8.43□□□□□ -1.06
RD3L-201ENST00000557640 GREM1O60565 184 aa8.43□□□□□ -1.06
RD3L-201ENST00000557640 OPHN1O60890 802 aa8.43□□□□□ -1.06
RD3L-201ENST00000557640 TULP3O75386 442 aa8.43□□□□□ -1.06
RD3L-201ENST00000557640 HOXD12P35452 270 aa8.43□□□□□ -1.06
RD3L-201ENST00000557640 EIF2DP41214 584 aaKnown RBP8.43□□□□□ -1.06
RD3L-201ENST00000557640 HMGN5P82970 282 aaKnown RBP8.43□□□□□ -1.06
RD3L-201ENST00000557640 ZNF33AQ06730 810 aa8.43□□□□□ -1.06
RD3L-201ENST00000557640 GRIK2Q13002 908 aa8.43□□□□□ -1.06
RD3L-201ENST00000557640 DUOXA1Q1HG43 343 aa8.43□□□□□ -1.06
RD3L-201ENST00000557640 ZNF423Q2M1K9 1284 aa8.43□□□□□ -1.06
RD3L-201ENST00000557640 MDH1BQ5I0G3 518 aa8.43□□□□□ -1.06
RD3L-201ENST00000557640 EOGTQ5NDL2 527 aa8.43□□□□□ -1.06
RD3L-201ENST00000557640 TOGARAM2Q6ZUX3 1019 aa8.43□□□□□ -1.06
RD3L-201ENST00000557640 BBS7Q8IWZ6 715 aa8.43□□□□□ -1.06
RD3L-201ENST00000557640 LRRC52Q8N7C0 313 aa8.43□□□□□ -1.06
RD3L-201ENST00000557640 NAT16Q8N8M0 369 aa8.43□□□□□ -1.06
RD3L-201ENST00000557640 TERB1Q8NA31 727 aa8.43□□□□□ -1.06
RD3L-201ENST00000557640 BAHD1Q8TBE0 780 aaPredicted RBP8.43□□□□□ -1.06
RD3L-201ENST00000557640 HNRNPLLQ8WVV9 542 aaKnown RBP8.43□□□□□ -1.06
RD3L-201ENST00000557640 POMGNT1Q8WZA1 660 aa8.43□□□□□ -1.06
RD3L-201ENST00000557640 COL26A1Q96A83 441 aa8.43□□□□□ -1.06
RD3L-201ENST00000557640 PCED1BQ96HM7 432 aa8.43□□□□□ -1.06
RD3L-201ENST00000557640 FUBP3Q96I24 572 aaKnown RBP eCLIP8.43□□□□□ -1.06
RD3L-201ENST00000557640 CDK5RAP3Q96JB5 506 aa8.43□□□□□ -1.06
RD3L-201ENST00000557640 SPATA17Q96L03 361 aa8.43□□□□□ -1.06
RD3L-201ENST00000557640 MRPL45Q9BRJ2 306 aaKnown RBP8.43□□□□□ -1.06
RD3L-201ENST00000557640 ZNF518BQ9C0D4 1074 aa8.43□□□□□ -1.06
RD3L-201ENST00000557640 GZF1Q9H116 711 aaPredicted RBP8.43□□□□□ -1.06
RD3L-201ENST00000557640 CACNA2D2Q9NY47 1150 aa8.43□□□□□ -1.06
RD3L-201ENST00000557640 TBC1D7Q9P0N9 293 aa8.43□□□□□ -1.06
RD3L-201ENST00000557640 NAGPAQ9UK23 515 aa8.43□□□□□ -1.06
RD3L-201ENST00000557640 COL5A1P20908 1838 aaPredicted RBP8.43□□□□□ -1.06
RD3L-201ENST00000557640 PRRT4C9JH25 899 aa8.42□□□□□ -1.06
RD3L-201ENST00000557640 CLDN5O00501 218 aa8.42□□□□□ -1.06
RD3L-201ENST00000557640 HOXC11O43248 304 aaPredicted RBP8.42□□□□□ -1.06
RD3L-201ENST00000557640 COCHO43405 550 aa8.42□□□□□ -1.06
RD3L-201ENST00000557640 HUS1O60921 280 aa8.42□□□□□ -1.06
RD3L-201ENST00000557640 TBCAO75347 108 aaKnown RBP8.42□□□□□ -1.06
RD3L-201ENST00000557640 ALDH1A2O94788 518 aa8.42□□□□□ -1.06
RD3L-201ENST00000557640 IL18RAPO95256 599 aa8.42□□□□□ -1.06
RD3L-201ENST00000557640 APODP05090 189 aa8.42□□□□□ -1.06
RD3L-201ENST00000557640 HOXB2P14652 356 aa8.42□□□□□ -1.06
RD3L-201ENST00000557640 MAOBP27338 520 aa8.42□□□□□ -1.06
RD3L-201ENST00000557640 PNPLA4P41247 253 aa8.42□□□□□ -1.06
RD3L-201ENST00000557640 GRIA2P42262 883 aa8.42□□□□□ -1.06
RD3L-201ENST00000557640 EPHA4P54764 986 aa8.42□□□□□ -1.06
RD3L-201ENST00000557640 GP2P55259 537 aaKnown RBP8.42□□□□□ -1.06
RD3L-201ENST00000557640 MYL7Q01449 175 aa8.42□□□□□ -1.06
RD3L-201ENST00000557640 GFPT1Q06210 699 aaPredicted RBP8.42□□□□□ -1.06
RD3L-201ENST00000557640 IFRD2Q12894 506 aaPredicted RBP8.42□□□□□ -1.06
RD3L-201ENST00000557640 TAF10Q12962 218 aa8.42□□□□□ -1.06
RD3L-201ENST00000557640 TRIP6Q15654 476 aaKnown RBP8.42□□□□□ -1.06
RD3L-201ENST00000557640 C10orf76Q5T2E6 689 aa8.42□□□□□ -1.06
RD3L-201ENST00000557640 DENND5BQ6ZUT9 1274 aa8.42□□□□□ -1.06
RD3L-201ENST00000557640 DYMQ7RTS9 669 aa8.42□□□□□ -1.06
RD3L-201ENST00000557640 ZNF720Q7Z2F6 126 aa8.42□□□□□ -1.06
RD3L-201ENST00000557640 TMEM25Q86YD3 366 aa8.42□□□□□ -1.06
RD3L-201ENST00000557640 TMEM86AQ8N2M4 240 aa8.42□□□□□ -1.06
RD3L-201ENST00000557640 HDDC3Q8N4P3 179 aa8.42□□□□□ -1.06
RD3L-201ENST00000557640 TOP6BLQ8N6T0 577 aa8.42□□□□□ -1.06
RD3L-201ENST00000557640 ZNF513Q8N8E2 541 aaPredicted RBP8.42□□□□□ -1.06
RD3L-201ENST00000557640 TRIML1Q8N9V2 468 aa8.42□□□□□ -1.06
RD3L-201ENST00000557640 FAM184AQ8NB25 1140 aa8.42□□□□□ -1.06
RD3L-201ENST00000557640 LARP4BQ92615 738 aaKnown RBP8.42□□□□□ -1.06
RD3L-201ENST00000557640 ELMO3Q96BJ8 720 aa8.42□□□□□ -1.06
RD3L-201ENST00000557640 DNAJC19Q96DA6 116 aa8.42□□□□□ -1.06
RD3L-201ENST00000557640 LRIG1Q96JA1 1093 aa8.42□□□□□ -1.06
RD3L-201ENST00000557640 PHACTR1Q9C0D0 580 aa8.42□□□□□ -1.06
RD3L-201ENST00000557640 CCSER2Q9H7U1 834 aa8.42□□□□□ -1.06
RD3L-201ENST00000557640 UPF2Q9HAU5 1272 aaKnown RBP8.42□□□□□ -1.06
RD3L-201ENST00000557640 RBAKQ9NYW8 714 aaPredicted RBP8.42□□□□□ -1.06
RD3L-201ENST00000557640 ITGA11Q9UKX5 1188 aa8.42□□□□□ -1.06
RD3L-201ENST00000557640 PCOLCE2Q9UKZ9 415 aa8.42□□□□□ -1.06
RD3L-201ENST00000557640 BTBD3Q9Y2F9 522 aa8.42□□□□□ -1.06
RD3L-201ENST00000557640 FNDC3AQ9Y2H6 1198 aaKnown RBP8.42□□□□□ -1.06
RD3L-201ENST00000557640 A0A087X0B3 334 aa8.41□□□□□ -1.06
RD3L-201ENST00000557640 MYMKA6NI61 221 aa8.41□□□□□ -1.06
RD3L-201ENST00000557640 WASH3PC4AMC7 463 aa8.41□□□□□ -1.06
RD3L-201ENST00000557640 H0Y626 953 aa8.41□□□□□ -1.06
RD3L-201ENST00000557640 AP5Z1O43299 807 aa8.41□□□□□ -1.06
RD3L-201ENST00000557640 DKK1O94907 266 aa8.41□□□□□ -1.06
RD3L-201ENST00000557640 TRIM16O95361 564 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms