RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 CACHD1Q5VU97 1274 aa5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 ATG14Q6ZNE5 492 aa5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 Q6ZUG5 572 aa5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 KCTD20Q7Z5Y7 419 aa5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 RASGRP3Q8IV61 690 aa5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 OR8H2Q8N162 312 aa5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 DNERQ8NFT8 737 aa5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 OR6Y1Q8NGX8 325 aa5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 MZB1Q8WU39 189 aa5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 GOLGA1Q92805 767 aa5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 SERINC2Q96SA4 455 aa5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 RBM15Q96T37 977 aaKnown RBP eCLIP5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 TTYH3Q9C0H2 523 aa5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 SIK2Q9H0K1 926 aa5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 TP63Q9H3D4 680 aaPredicted RBP5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 MRPS18AQ9NVS2 196 aaKnown RBP5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 TMEM160Q9NX00 188 aa5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 DKK4Q9UBT3 224 aa5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 CAPN11Q9UMQ6 739 aa5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 ZNF646O15015 1829 aaPredicted RBP5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 USP42Q9H9J4 1324 aaKnown RBP5.48□□□□□ -1.53
MTHFD1-216ENST00000557539 COL4A3Q01955 1670 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 CCDC196A0A1B0GTZ2 297 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 FSD2A1L4K1 749 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 UBE2Q2LH0YL09 131 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 CCP110O43303 1012 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 TK1P04183 234 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 CYP2C9P11712 490 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 ZNF28P17035 718 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 GLDCP23378 1020 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 MST1P26927 711 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 GMPSP49915 693 aaPredicted RBP5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 CASP6P55212 293 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 WNT3P56703 355 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 CLRN1P58418 232 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 DCAF7P61962 342 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 VAMP2P63027 116 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 ADAM8P78325 824 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 MRPL49Q13405 166 aaKnown RBP5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 USP10Q14694 798 aaKnown RBP5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 UBXN2BQ14CS0 331 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 KCNA10Q16322 511 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 BTBD16Q32M84 506 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 PRR31Q5SQ13 230 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 ICE2Q659A1 982 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 HAUS3Q68CZ6 603 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 ANKS6Q68DC2 871 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 USP30Q70CQ3 517 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 MOB2Q70IA6 237 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 SIAH1Q8IUQ4 282 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 IGDCC3Q8IVU1 814 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 REXO1L1PQ8IX06 675 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 TMEM57Q8N5G2 664 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 TSPYL6Q8N831 410 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 GPATCH11Q8N954 259 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 ANKRD52Q8NB46 1076 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 TBC1D15Q8TC07 691 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 ADAMTS18Q8TE60 1221 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 ZUFSPQ96AP4 578 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 C3orf49Q96BT1 292 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 GRAMD1AQ96CP6 724 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 KLHL32Q96NJ5 620 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 GPHA2Q96T91 129 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 SDF4Q9BRK5 362 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 GPR63Q9BZJ6 419 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 PAIP1Q9H074 479 aaKnown RBP5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 BRD8Q9H0E9 1235 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 ENKD1Q9H0I2 346 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 ELAC1Q9H777 363 aaKnown RBP5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 ZBTB26Q9HCK0 441 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 XPNPEP3Q9NQH7 507 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 HELLSQ9NRZ9 838 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 HESX1Q9UBX0 185 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 MBD1Q9UIS9 605 aaPredicted RBP5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 CA14Q9ULX7 337 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 UBR5O95071 2799 aaPredicted RBP5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 CACNA1SQ13698 1873 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 C2CD3Q4AC94 2353 aa5.47□□□□□ -1.53
MTHFD1-216ENST00000557539 SLX4Q8IY92 1834 aa5.46□□□□□ -1.53
MTHFD1-216ENST00000557539 COL1A1P02452 1464 aaPredicted RBP5.46□□□□□ -1.53
MTHFD1-216ENST00000557539 A0A087X0M5 115 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 MYOCOSA0A1B0GUC4 107 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 A0A1B0GX30 115 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 AQP7P3A6NL99 342 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 E9PLN8 166 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 PJA2O43164 708 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 RRP9O43818 475 aaKnown RBP5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 TMCC2O75069 709 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 ZBED4O75132 1171 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 PIAS2O75928 621 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 RASAL1O95294 804 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 NTSR2O95665 410 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 ANXA6P08133 673 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 HNRNPA1P09651 372 aaKnown RBP eCLIP5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 FDXRP22570 491 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 SLC6A2P23975 617 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 VIPR2P41587 438 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 EPHB3P54753 998 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 NAP1L1P55209 391 aaKnown RBP5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 KRT17Q04695 432 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms