RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 ERICH1Q86X53 443 aa8.7□□□□□ -1.02
PSEN1-223ENST00000557511 ZDHHC17Q8IUH5 632 aa8.7□□□□□ -1.02
PSEN1-223ENST00000557511 UNC45BQ8IWX7 931 aa8.7□□□□□ -1.02
PSEN1-223ENST00000557511 ADGRG2Q8IZP9 1017 aa8.7□□□□□ -1.02
PSEN1-223ENST00000557511 ZNF511Q8NB15 262 aa8.7□□□□□ -1.02
PSEN1-223ENST00000557511 ZNF397Q8NF99 534 aaPredicted RBP8.7□□□□□ -1.02
PSEN1-223ENST00000557511 LRRN4Q8WUT4 740 aa8.7□□□□□ -1.02
PSEN1-223ENST00000557511 EDEM1Q92611 657 aa8.7□□□□□ -1.02
PSEN1-223ENST00000557511 ATOH1Q92858 354 aaPredicted RBP8.7□□□□□ -1.02
PSEN1-223ENST00000557511 RNF34Q969K3 372 aa8.7□□□□□ -1.02
PSEN1-223ENST00000557511 DDX50Q9BQ39 737 aaKnown RBP8.7□□□□□ -1.02
PSEN1-223ENST00000557511 GANQ9H2C0 597 aa8.7□□□□□ -1.02
PSEN1-223ENST00000557511 LINC00597Q9H2U6 94 aa8.7□□□□□ -1.02
PSEN1-223ENST00000557511 TSPY26PQ9H489 355 aa8.7□□□□□ -1.02
PSEN1-223ENST00000557511 POPDC2Q9HBU9 364 aa8.7□□□□□ -1.02
PSEN1-223ENST00000557511 OSER1Q9NX31 292 aa8.7□□□□□ -1.02
PSEN1-223ENST00000557511 WDR35Q9P2L0 1181 aa8.7□□□□□ -1.02
PSEN1-223ENST00000557511 SLC12A6Q9UHW9 1150 aa8.7□□□□□ -1.02
PSEN1-223ENST00000557511 DOCK6Q96HP0 2047 aa8.7□□□□□ -1.02
PSEN1-223ENST00000557511 MYO10Q9HD67 2058 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 C5orf42Q9H799 3197 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 NUP210Q8TEM1 1887 aaPredicted RBP8.69□□□□□ -1.02
PSEN1-223ENST00000557511 A0A1W2PQC6 194 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 YJEFN3A6XGL0 299 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 E5RJQ4 531 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 E7ENQ6 273 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 TRDMT1O14717 391 aaKnown RBP8.69□□□□□ -1.02
PSEN1-223ENST00000557511 SCAMP3O14828 347 aaKnown RBP8.69□□□□□ -1.02
PSEN1-223ENST00000557511 APOEP02649 317 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 CYP17A1P05093 508 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 GLI1P08151 1106 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 TPM1P09493 284 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 PNMA6AP0CW24 399 aaPredicted RBP8.69□□□□□ -1.02
PSEN1-223ENST00000557511 FERP16591 822 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 EIF2DP41214 584 aaKnown RBP8.69□□□□□ -1.02
PSEN1-223ENST00000557511 SLC11A2P49281 568 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 GALK1P51570 392 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 CCR3P51677 355 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 TBX4P57082 545 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 ZNF445P59923 1031 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 YWHAZP63104 245 aaKnown RBP8.69□□□□□ -1.02
PSEN1-223ENST00000557511 CDK17Q00537 523 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 ARID5AQ03989 594 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 IQCB1Q15051 598 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 E2F5Q15329 346 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 ANGPT1Q15389 498 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 NFKBIBQ15653 356 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 NUGGCQ68CJ6 796 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 PPP1R2P3Q6NXS1 205 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 ZC3H14Q6PJT7 736 aaKnown RBP8.69□□□□□ -1.02
PSEN1-223ENST00000557511 TRIM72Q6ZMU5 477 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 TPGS1Q6ZTW0 290 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 SND1Q7KZF4 910 aaKnown RBP eCLIP8.69□□□□□ -1.022e-8■■■■□ 24.4
PSEN1-223ENST00000557511 TMEM110Q86TL2 294 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 LUZP1Q86V48 1076 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 C1orf210Q8IVY1 113 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 BBS7Q8IWZ6 715 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 C1orf131Q8NDD1 294 aaKnown RBP8.69□□□□□ -1.02
PSEN1-223ENST00000557511 SNIP1Q8TAD8 396 aaKnown RBP8.69□□□□□ -1.02
PSEN1-223ENST00000557511 NDRG1Q92597 394 aaKnown RBP8.69□□□□□ -1.02
PSEN1-223ENST00000557511 CLDN23Q96B33 292 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 C18orf8Q96DM3 657 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 IQCDQ96DY2 449 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 FAM122AQ96E09 287 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 PNKPQ96T60 521 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 ZSWIM1Q9BR11 485 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 FUCA2Q9BTY2 467 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 NUP58Q9BVL2 599 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 BBS2Q9BXC9 721 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 NAA15Q9BXJ9 866 aaKnown RBP8.69□□□□□ -1.02
PSEN1-223ENST00000557511 ACP6Q9NPH0 428 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 SPHK2Q9NRA0 654 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 TMEM51Q9NW97 253 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 ASNSD1Q9NWL6 643 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 DEC1Q9P2X7 70 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 SIK3Q9Y2K2 1263 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 PTPRDP23468 1912 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 TECTAO75443 2155 aa8.69□□□□□ -1.02
PSEN1-223ENST00000557511 A0A1B0GTH6 734 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 TBC1D3BA6NDS4 549 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 NEDD8-MDP1E9PL57 170 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 HSF2BPO75031 334 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 STC2O76061 302 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 LATS1O95835 1130 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 SLC2A3P11169 496 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 CHRNB1P11230 501 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 NSFP46459 744 aaKnown RBP8.68□□□□□ -1.02
PSEN1-223ENST00000557511 CXCL12P48061 93 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 RPL34P49207 117 aaKnown RBP8.68□□□□□ -1.02
PSEN1-223ENST00000557511 PGFP49763 221 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 KLK7P49862 253 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 NRLP54845 237 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 ZXDBP98169 803 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 FANCCQ00597 558 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 CDR2Q01850 454 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 CSTF1Q05048 431 aaKnown RBP8.68□□□□□ -1.02
PSEN1-223ENST00000557511 MTA1Q13330 715 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 TRIP4Q15650 581 aaPredicted RBP8.68□□□□□ -1.02
PSEN1-223ENST00000557511 TMEM196Q5HYL7 178 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 LY6G5CQ5SRR4 150 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms