RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 LARP4BQ92615 738 aaKnown RBP6.22□□□□□ -1.41
VPS33B-207ENST00000557470 ZNF837Q96EG3 531 aaPredicted RBP6.22□□□□□ -1.41
VPS33B-207ENST00000557470 CALML4Q96GE6 196 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 ZSCAN31Q96LW9 406 aaPredicted RBP6.22□□□□□ -1.41
VPS33B-207ENST00000557470 AK8Q96MA6 479 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 CEP295NLQ96MC4 621 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 FAM129BQ96TA1 746 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 STRA6Q9BX79 667 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 CCDC86Q9H6F5 360 aaKnown RBP6.22□□□□□ -1.41
VPS33B-207ENST00000557470 CD248Q9HCU0 757 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 TMEM30AQ9NV96 361 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 RBAKQ9NYW8 714 aaPredicted RBP6.22□□□□□ -1.41
VPS33B-207ENST00000557470 GGT7Q9UJ14 662 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 CDH9Q9ULB4 789 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 CYP8B1Q9UNU6 501 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 AK5Q9Y6K8 562 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 MAST4O15021 2626 aa6.21□□□□□ -1.41
VPS33B-207ENST00000557470 MYOFQ9NZM1 2061 aa6.21□□□□□ -1.41
VPS33B-207ENST00000557470 ASXL3Q9C0F0 2248 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 A0A1W2PQD8 194 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 GOLGA8IPA6NC78 632 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 GOLGA8JA6NMD2 632 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 TRIM24O15164 1050 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 HOXC11O43248 304 aaPredicted RBP6.21□□□□□ -1.42
VPS33B-207ENST00000557470 CBFA2T3O75081 653 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 TULP3O75386 442 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 SYPP08247 313 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 TMEM191BP0C7N4 346 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 MBL2P11226 248 aaPredicted RBP6.21□□□□□ -1.42
VPS33B-207ENST00000557470 HOXB2P14652 356 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 ANXA13P27216 316 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 DDIT3P35638 169 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 PPP3CCP48454 512 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 CACNA2D1P54289 1103 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 GAD2Q05329 585 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 IFRD2Q12894 506 aaPredicted RBP6.21□□□□□ -1.42
VPS33B-207ENST00000557470 MYO1EQ12965 1108 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 GRIK2Q13002 908 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 MAPRE1Q15691 268 aaKnown RBP6.21□□□□□ -1.42
VPS33B-207ENST00000557470 MDH1BQ5I0G3 518 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 C10orf76Q5T2E6 689 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 L1TD1Q5T7N2 865 aaKnown RBP6.21□□□□□ -1.42
VPS33B-207ENST00000557470 RIPOR1Q6ZS17 1223 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 TRMT11Q7Z4G4 463 aaKnown RBP6.21□□□□□ -1.42
VPS33B-207ENST00000557470 SLCO6A1Q86UG4 719 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 DDX42Q86XP3 938 aaKnown RBP eCLIP6.21□□□□□ -1.42
VPS33B-207ENST00000557470 TERB1Q8NA31 727 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 RASSF8Q8NHQ8 419 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 NOC3LQ8WTT2 800 aaKnown RBP6.21□□□□□ -1.42
VPS33B-207ENST00000557470 RELTQ969Z4 430 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 HVCN1Q96D96 273 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 PCED1BQ96HM7 432 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 HPDLQ96IR7 371 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 LRIG1Q96JA1 1093 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 ACCSQ96QU6 501 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 ACOX2Q99424 681 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 CBWD1Q9BRT8 395 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 NIF3L1Q9GZT8 377 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 SLC6A17Q9H1V8 727 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 PDE11AQ9HCR9 933 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 CD93Q9NPY3 652 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 TBC1D7Q9P0N9 293 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 TBC1D14Q9P2M4 693 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 NME7Q9Y5B8 376 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 PCDHGA11Q9Y5H2 935 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 COMMD10Q9Y6G5 202 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 PTPRJQ12913 1337 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 PLXNB3Q9ULL4 1909 aa6.21□□□□□ -1.42
VPS33B-207ENST00000557470 MYO18AQ92614 2054 aaKnown RBP6.21□□□□□ -1.42
VPS33B-207ENST00000557470 TENM4Q6N022 2769 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 E2F8A0AVK6 867 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 COCHO43405 550 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 FZD6O60353 706 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 ZNF217O75362 1048 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 GARTP22102 1010 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 WARSP23381 471 aaKnown RBP6.2□□□□□ -1.42
VPS33B-207ENST00000557470 MAOBP27338 520 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 NTSR1P30989 418 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 DEKP35659 375 aaKnown RBP6.2□□□□□ -1.42
VPS33B-207ENST00000557470 EIF1AXP47813 144 aaKnown RBP6.2□□□□□ -1.42
VPS33B-207ENST00000557470 GSK3AP49840 483 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 CASP5P51878 434 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 CENPCQ03188 943 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 ANO4Q32M45 955 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 TDRD10Q5VZ19 366 aaKnown RBP6.2□□□□□ -1.42
VPS33B-207ENST00000557470 BTBD8Q5XKL5 378 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 TOGARAM2Q6ZUX3 1019 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 DYMQ7RTS9 669 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 C11orf96Q7Z7L8 435 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 TMEM25Q86YD3 366 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 MARCH9Q86YJ5 346 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 BBS7Q8IWZ6 715 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 TSEN2Q8NCE0 465 aaKnown RBP6.2□□□□□ -1.42
VPS33B-207ENST00000557470 OR5B17Q8NGF7 314 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 MYCBPAPQ8TBZ2 947 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 FBF1Q8TES7 1133 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 IPO4Q8TEX9 1081 aaKnown RBP6.2□□□□□ -1.42
VPS33B-207ENST00000557470 WBP2Q969T9 261 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 OTUB2Q96DC9 234 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 ZNF419Q96HQ0 510 aaPredicted RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms