RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 LAYNQ6UX15 382 aa14.79□□□□□ -0.04
SLIRP-210ENST00000557431 CCDC186Q7Z3E2 898 aa14.79□□□□□ -0.04
SLIRP-210ENST00000557431 RABEPKQ7Z6M1 372 aa14.79□□□□□ -0.04
SLIRP-210ENST00000557431 PROSER1Q86XN7 944 aa14.79□□□□□ -0.04
SLIRP-210ENST00000557431 TMPRSS6Q8IU80 811 aa14.79□□□□□ -0.04
SLIRP-210ENST00000557431 MDM1Q8TC05 714 aa14.79□□□□□ -0.04
SLIRP-210ENST00000557431 ARID3AQ99856 593 aa14.79□□□□□ -0.04
SLIRP-210ENST00000557431 USP36Q9P275 1121 aaKnown RBP14.79□□□□□ -0.04
SLIRP-210ENST00000557431 THAP10Q9P2Z0 257 aaPredicted RBP14.79□□□□□ -0.04
SLIRP-210ENST00000557431 EIF2B4Q9UI10 523 aaKnown RBP14.79□□□□□ -0.04
SLIRP-210ENST00000557431 FNDC3AQ9Y2H6 1198 aaKnown RBP14.79□□□□□ -0.04
SLIRP-210ENST00000557431 URB1O60287 2271 aaKnown RBP14.78□□□□□ -0.04
SLIRP-210ENST00000557431 SLC12A8A0AV02 714 aa14.78□□□□□ -0.04
SLIRP-210ENST00000557431 GOLGA8CPA6NN73 597 aa14.78□□□□□ -0.04
SLIRP-210ENST00000557431 TULP2O00295 520 aa14.78□□□□□ -0.04
SLIRP-210ENST00000557431 GFRA2O00451 464 aa14.78□□□□□ -0.04
SLIRP-210ENST00000557431 TSPAN3O60637 253 aa14.78□□□□□ -0.04
SLIRP-210ENST00000557431 SLFN14P0C7P3 912 aa14.78□□□□□ -0.04
SLIRP-210ENST00000557431 PFKFB1P16118 471 aa14.78□□□□□ -0.04
SLIRP-210ENST00000557431 NR2F2P24468 414 aa14.78□□□□□ -0.04
SLIRP-210ENST00000557431 TPMTP51580 245 aa14.78□□□□□ -0.04
SLIRP-210ENST00000557431 COPAP53621 1224 aa14.78□□□□□ -0.04
SLIRP-210ENST00000557431 WDR45BQ5MNZ6 344 aa14.78□□□□□ -0.04
SLIRP-210ENST00000557431 SETD7Q8WTS6 366 aaKnown RBP14.78□□□□□ -0.04
SLIRP-210ENST00000557431 SNX19Q92543 992 aa14.78□□□□□ -0.04
SLIRP-210ENST00000557431 TAF4BQ92750 862 aa14.78□□□□□ -0.04
SLIRP-210ENST00000557431 SEMA4DQ92854 862 aa14.78□□□□□ -0.04
SLIRP-210ENST00000557431 SIPA1Q96FS4 1042 aa14.78□□□□□ -0.04
SLIRP-210ENST00000557431 EEF2KMTQ96G04 330 aa14.78□□□□□ -0.04
SLIRP-210ENST00000557431 PIWIL1Q96J94 861 aaKnown RBP14.78□□□□□ -0.04
SLIRP-210ENST00000557431 DUSP16Q9BY84 665 aa14.78□□□□□ -0.04
SLIRP-210ENST00000557431 CIPCQ9C0C6 399 aa14.78□□□□□ -0.04
SLIRP-210ENST00000557431 NIF3L1Q9GZT8 377 aa14.78□□□□□ -0.04
SLIRP-210ENST00000557431 SUSD2Q9UGT4 822 aa14.78□□□□□ -0.04
SLIRP-210ENST00000557431 AGO1Q9UL18 857 aaKnown RBP14.78□□□□□ -0.04
SLIRP-210ENST00000557431 FRMD4BQ9Y2L6 1034 aa14.78□□□□□ -0.04
SLIRP-210ENST00000557431 FASNP49327 2511 aaKnown RBP14.77□□□□□ -0.04
SLIRP-210ENST00000557431 A0A1B0GTW7 788 aa14.77□□□□□ -0.05
SLIRP-210ENST00000557431 H0Y626 953 aa14.77□□□□□ -0.05
SLIRP-210ENST00000557431 TRIM16O95361 564 aa14.77□□□□□ -0.05
SLIRP-210ENST00000557431 EPHX1P07099 455 aa14.77□□□□□ -0.05
SLIRP-210ENST00000557431 RALAP11233 206 aa14.77□□□□□ -0.05
SLIRP-210ENST00000557431 GNSP15586 552 aa14.77□□□□□ -0.05
SLIRP-210ENST00000557431 ZNF423Q2M1K9 1284 aa14.77□□□□□ -0.05
SLIRP-210ENST00000557431 KLHDC10Q6PID8 442 aa14.77□□□□□ -0.05
SLIRP-210ENST00000557431 ANKS1BQ7Z6G8 1248 aa14.77□□□□□ -0.05
SLIRP-210ENST00000557431 PIGZQ86VD9 579 aa14.77□□□□□ -0.05
SLIRP-210ENST00000557431 CYB5D2Q8WUJ1 264 aa14.77□□□□□ -0.05
SLIRP-210ENST00000557431 ADAMTS14Q8WXS8 1223 aa14.77□□□□□ -0.05
SLIRP-210ENST00000557431 DNASE2BQ8WZ79 361 aa14.77□□□□□ -0.05
SLIRP-210ENST00000557431 FOXJ1Q92949 421 aa14.77□□□□□ -0.05
SLIRP-210ENST00000557431 HEXIM2Q96MH2 286 aaKnown RBP14.77□□□□□ -0.05
SLIRP-210ENST00000557431 IMPG2Q9BZV3 1241 aa14.77□□□□□ -0.05
SLIRP-210ENST00000557431 FAM124BQ9H5Z6 455 aaPredicted RBP14.77□□□□□ -0.05
SLIRP-210ENST00000557431 GAREM1Q9H706 876 aa14.77□□□□□ -0.05
SLIRP-210ENST00000557431 ITM2CQ9NQX7 267 aa14.77□□□□□ -0.05
SLIRP-210ENST00000557431 SLC27A6Q9Y2P4 619 aa14.77□□□□□ -0.05
SLIRP-210ENST00000557431 USP3Q9Y6I4 520 aa14.77□□□□□ -0.05
SLIRP-210ENST00000557431 A0A1B0GVT2 93 aa14.76□□□□□ -0.05
SLIRP-210ENST00000557431 FAM221BA6H8Z2 402 aa14.76□□□□□ -0.05
SLIRP-210ENST00000557431 KCNK3O14649 394 aa14.76□□□□□ -0.05
SLIRP-210ENST00000557431 IKBKBO14920 756 aa14.76□□□□□ -0.05
SLIRP-210ENST00000557431 CALUO43852 315 aaPredicted RBP14.76□□□□□ -0.05
SLIRP-210ENST00000557431 CBFA2T3O75081 653 aa14.76□□□□□ -0.05
SLIRP-210ENST00000557431 RDXP35241 583 aaKnown RBP14.76□□□□□ -0.05
SLIRP-210ENST00000557431 COL28A1Q2UY09 1125 aa14.76□□□□□ -0.05
SLIRP-210ENST00000557431 FAM186BQ8IYM0 893 aa14.76□□□□□ -0.05
SLIRP-210ENST00000557431 SLC4A11Q8NBS3 891 aa14.76□□□□□ -0.05
SLIRP-210ENST00000557431 RBBP8NLQ8NC74 664 aaPredicted RBP14.76□□□□□ -0.05
SLIRP-210ENST00000557431 DDI1Q8WTU0 396 aa14.76□□□□□ -0.05
SLIRP-210ENST00000557431 PRCCQ92733 491 aaPredicted RBP14.76□□□□□ -0.05
SLIRP-210ENST00000557431 TATDN2Q93075 761 aa14.76□□□□□ -0.05
SLIRP-210ENST00000557431 ULBP1Q9BZM6 244 aa14.76□□□□□ -0.05
SLIRP-210ENST00000557431 C6orf106Q9H6K1 298 aaPredicted RBP14.76□□□□□ -0.05
SLIRP-210ENST00000557431 CYP3A43Q9HB55 503 aa14.76□□□□□ -0.05
SLIRP-210ENST00000557431 PNPLA8Q9NP80 782 aa14.76□□□□□ -0.05
SLIRP-210ENST00000557431 TM7SF3Q9NS93 570 aa14.76□□□□□ -0.05
SLIRP-210ENST00000557431 ELOVL2Q9NXB9 296 aa14.76□□□□□ -0.05
SLIRP-210ENST00000557431 MARCH2Q9P0N8 246 aa14.76□□□□□ -0.05
SLIRP-210ENST00000557431 PCOLCE2Q9UKZ9 415 aa14.76□□□□□ -0.05
SLIRP-210ENST00000557431 TRAF3IP3Q9Y228 551 aa14.76□□□□□ -0.05
SLIRP-210ENST00000557431 BTBD3Q9Y2F9 522 aa14.76□□□□□ -0.05
SLIRP-210ENST00000557431 CELSR3Q9NYQ7 3312 aa14.76□□□□□ -0.05
SLIRP-210ENST00000557431 ANKRD11Q6UB99 2663 aaPredicted RBP14.76□□□□□ -0.05
SLIRP-210ENST00000557431 METTL12A8MUP2 240 aa14.75□□□□□ -0.05
SLIRP-210ENST00000557431 SYNCRIPO60506 623 aaKnown RBP14.75□□□□□ -0.05
SLIRP-210ENST00000557431 TRIM21P19474 475 aaKnown RBP14.75□□□□□ -0.05
SLIRP-210ENST00000557431 ACSL1P33121 698 aa14.75□□□□□ -0.05
SLIRP-210ENST00000557431 CSNK1EP49674 416 aaKnown RBP14.75□□□□□ -0.05
SLIRP-210ENST00000557431 PSEN1P49768 467 aa14.75□□□□□ -0.05
SLIRP-210ENST00000557431 SGSHP51688 502 aa14.75□□□□□ -0.05
SLIRP-210ENST00000557431 RAD23BP54727 409 aa14.75□□□□□ -0.05
SLIRP-210ENST00000557431 YWHAGP61981 247 aaKnown RBP eCLIP14.75□□□□□ -0.05
SLIRP-210ENST00000557431 COG7P83436 770 aa14.75□□□□□ -0.05
SLIRP-210ENST00000557431 ENPP2Q13822 863 aa14.75□□□□□ -0.05
SLIRP-210ENST00000557431 CCDC157Q569K6 752 aa14.75□□□□□ -0.05
SLIRP-210ENST00000557431 SERPINA13PQ6UXR4 307 aa14.75□□□□□ -0.05
SLIRP-210ENST00000557431 RSRC2Q7L4I2 434 aaKnown RBP14.75□□□□□ -0.05
SLIRP-210ENST00000557431 SMYD4Q8IYR2 804 aaPredicted RBP14.75□□□□□ -0.05
SLIRP-210ENST00000557431 UCMAQ8WVF2 138 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms