RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 ALG13Q9NP73 1137 aaKnown RBP4.56□□□□□ -1.68
CHD8-212ENST00000557329 XPNPEP3Q9NQH7 507 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 ANLNQ9NQW6 1124 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 ARHGEF3Q9NR81 526 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 SERTAD4Q9NUC0 356 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 VSX1Q9NZR4 365 aaPredicted RBP4.56□□□□□ -1.68
CHD8-212ENST00000557329 KNSTRNQ9Y448 316 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 WNT6Q9Y6F9 365 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.56□□□□□ -1.68
CHD8-212ENST00000557329 CUL9Q8IWT3 2517 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 VCANP13611 3396 aa4.56□□□□□ -1.68
CHD8-212ENST00000557329 RTL9Q8NET4 1388 aa4.55□□□□□ -1.68
CHD8-212ENST00000557329 CCL15-CCL14A0A0B4J2E2 113 aa4.55□□□□□ -1.68
CHD8-212ENST00000557329 CFAP69A5D8W1 941 aa4.55□□□□□ -1.68
CHD8-212ENST00000557329 NTSR2O95665 410 aa4.55□□□□□ -1.68
CHD8-212ENST00000557329 FAM163BP0C2L3 166 aa4.55□□□□□ -1.68
CHD8-212ENST00000557329 HOXD10P28358 340 aa4.55□□□□□ -1.68
CHD8-212ENST00000557329 SLC7A1P30825 629 aa4.55□□□□□ -1.68
CHD8-212ENST00000557329 TOB1P50616 345 aaPredicted RBP4.55□□□□□ -1.68
CHD8-212ENST00000557329 PDE6CP51160 858 aa4.55□□□□□ -1.68
CHD8-212ENST00000557329 KRT17Q04695 432 aa4.55□□□□□ -1.68
CHD8-212ENST00000557329 SLC13A2Q13183 592 aa4.55□□□□□ -1.68
CHD8-212ENST00000557329 TBCCQ15814 346 aa4.55□□□□□ -1.68
CHD8-212ENST00000557329 CCL15Q16663 113 aa4.55□□□□□ -1.68
CHD8-212ENST00000557329 PARP10Q53GL7 1025 aa4.55□□□□□ -1.68
CHD8-212ENST00000557329 AARS2Q5JTZ9 985 aaKnown RBP4.55□□□□□ -1.68
CHD8-212ENST00000557329 CEP85Q6P2H3 762 aa4.55□□□□□ -1.68
CHD8-212ENST00000557329 SLC15A3Q8IY34 581 aa4.55□□□□□ -1.68
CHD8-212ENST00000557329 TDHQ8IZJ6 230 aa4.55□□□□□ -1.68
CHD8-212ENST00000557329 SDR16C5Q8N3Y7 309 aa4.55□□□□□ -1.68
CHD8-212ENST00000557329 PCSK9Q8NBP7 692 aaKnown RBP4.55□□□□□ -1.68
CHD8-212ENST00000557329 AGBL3Q8NEM8 1001 aa4.55□□□□□ -1.68
CHD8-212ENST00000557329 MAFAQ8NHW3 353 aaPredicted RBP4.55□□□□□ -1.68
CHD8-212ENST00000557329 TBC1D16Q8TBP0 767 aa4.55□□□□□ -1.68
CHD8-212ENST00000557329 U2AF1L4Q8WU68 220 aaKnown RBP4.55□□□□□ -1.68
CHD8-212ENST00000557329 CELF1Q92879 486 aaKnown RBP4.55□□□□□ -1.68
CHD8-212ENST00000557329 OPTNQ96CV9 577 aa4.55□□□□□ -1.68
CHD8-212ENST00000557329 NMD3Q96D46 503 aaKnown RBP4.55□□□□□ -1.68
CHD8-212ENST00000557329 RSPRY1Q96DX4 576 aa4.55□□□□□ -1.68
CHD8-212ENST00000557329 ZNF764Q96H86 408 aaPredicted RBP4.55□□□□□ -1.68
CHD8-212ENST00000557329 MESP1Q9BRJ9 268 aa4.55□□□□□ -1.68
CHD8-212ENST00000557329 TTYH3Q9C0H2 523 aa4.55□□□□□ -1.68
CHD8-212ENST00000557329 GLOD4Q9HC38 313 aa4.55□□□□□ -1.68
CHD8-212ENST00000557329 GEMIN8Q9NWZ8 242 aaKnown RBP4.55□□□□□ -1.68
CHD8-212ENST00000557329 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.55□□□□□ -1.68
CHD8-212ENST00000557329 NOB1Q9ULX3 412 aaKnown RBP4.55□□□□□ -1.68
CHD8-212ENST00000557329 SNED1Q8TER0 1413 aa4.55□□□□□ -1.68
CHD8-212ENST00000557329 CLRN2A0PK11 232 aa4.54□□□□□ -1.68
CHD8-212ENST00000557329 M0R3H8 397 aa4.54□□□□□ -1.68
CHD8-212ENST00000557329 MYO1FO00160 1098 aa4.54□□□□□ -1.68
CHD8-212ENST00000557329 IGLV2-14P01704 120 aa4.54□□□□□ -1.68
CHD8-212ENST00000557329 KLRC1P26715 233 aa4.54□□□□□ -1.68
CHD8-212ENST00000557329 PSMC4P43686 418 aa4.54□□□□□ -1.68
CHD8-212ENST00000557329 CLK3P49761 638 aaKnown RBP4.54□□□□□ -1.68
CHD8-212ENST00000557329 CCT8P50990 548 aa4.54□□□□□ -1.68
CHD8-212ENST00000557329 UCP3P55916 312 aa4.54□□□□□ -1.68
CHD8-212ENST00000557329 CNN3Q15417 329 aaKnown RBP4.54□□□□□ -1.68
CHD8-212ENST00000557329 SUPT20HL1Q3ZLR7 823 aa4.54□□□□□ -1.68
CHD8-212ENST00000557329 C4orf46Q504U0 113 aa4.54□□□□□ -1.68
CHD8-212ENST00000557329 CC2D1BQ5T0F9 858 aaKnown RBP4.54□□□□□ -1.68
CHD8-212ENST00000557329 DENND2CQ68D51 928 aa4.54□□□□□ -1.68
CHD8-212ENST00000557329 APOBEC3FQ8IUX4 373 aaKnown RBP4.54□□□□□ -1.68
CHD8-212ENST00000557329 ZNF34Q8IZ26 560 aa4.54□□□□□ -1.68
CHD8-212ENST00000557329 IL31RAQ8NI17 732 aa4.54□□□□□ -1.68
CHD8-212ENST00000557329 PPP1R35Q8TAP8 253 aa4.54□□□□□ -1.68
CHD8-212ENST00000557329 LRTOMTQ8WZ04 291 aa4.54□□□□□ -1.68
CHD8-212ENST00000557329 RFKQ969G6 155 aa4.54□□□□□ -1.68
CHD8-212ENST00000557329 ZNF668Q96K58 619 aaPredicted RBP4.54□□□□□ -1.68
CHD8-212ENST00000557329 DEFB118Q96PH6 123 aa4.54□□□□□ -1.68
CHD8-212ENST00000557329 PPP1R9BQ96SB3 815 aa4.54□□□□□ -1.68
CHD8-212ENST00000557329 DEFB129Q9H1M3 183 aa4.54□□□□□ -1.68
CHD8-212ENST00000557329 DHX36Q9H2U1 1008 aaKnown RBP4.54□□□□□ -1.68
CHD8-212ENST00000557329 SMOC2Q9H3U7 446 aa4.54□□□□□ -1.68
CHD8-212ENST00000557329 ZMAT3Q9HA38 289 aaKnown RBP4.54□□□□□ -1.68
CHD8-212ENST00000557329 AFF4Q9UHB7 1163 aaKnown RBP4.54□□□□□ -1.68
CHD8-212ENST00000557329 RIPOR2Q9Y4F9 1068 aa4.54□□□□□ -1.68
CHD8-212ENST00000557329 RANBP2P49792 3224 aaKnown RBP4.53□□□□□ -1.68
CHD8-212ENST00000557329 LAMA3Q16787 3333 aa4.53□□□□□ -1.68
CHD8-212ENST00000557329 SH3TC1Q8TE82 1336 aa4.53□□□□□ -1.68
CHD8-212ENST00000557329 PSMD9O00233 223 aa4.53□□□□□ -1.68
CHD8-212ENST00000557329 QSOX1O00391 747 aa4.53□□□□□ -1.68
CHD8-212ENST00000557329 PRPF3O43395 683 aaKnown RBP4.53□□□□□ -1.68
CHD8-212ENST00000557329 JTBO76095 146 aa4.53□□□□□ -1.68
CHD8-212ENST00000557329 SGPL1O95470 568 aa4.53□□□□□ -1.68
CHD8-212ENST00000557329 NR2F6P10588 404 aa4.53□□□□□ -1.68
CHD8-212ENST00000557329 FOSL2P15408 326 aa4.53□□□□□ -1.68
CHD8-212ENST00000557329 PRKAR1BP31321 381 aa4.53□□□□□ -1.68
CHD8-212ENST00000557329 DGKEP52429 567 aa4.53□□□□□ -1.68
CHD8-212ENST00000557329 LILRA4P59901 499 aa4.53□□□□□ -1.68
CHD8-212ENST00000557329 RPS8P62241 208 aaKnown RBP4.53□□□□□ -1.68
CHD8-212ENST00000557329 DLGAP5Q15398 846 aa4.53□□□□□ -1.68
CHD8-212ENST00000557329 TAF7Q15545 349 aaPredicted RBP4.53□□□□□ -1.68
CHD8-212ENST00000557329 SLC10A5Q5PT55 438 aa4.53□□□□□ -1.68
CHD8-212ENST00000557329 CERCAMQ5T4B2 595 aa4.53□□□□□ -1.68
CHD8-212ENST00000557329 ARHGAP40Q5TG30 622 aa4.53□□□□□ -1.68
CHD8-212ENST00000557329 RNF220Q5VTB9 566 aa4.53□□□□□ -1.68
CHD8-212ENST00000557329 MZT2AQ6P582 158 aa4.53□□□□□ -1.68
CHD8-212ENST00000557329 TSHZ1Q6ZSZ6 1077 aa4.53□□□□□ -1.68
CHD8-212ENST00000557329 CCDC149Q6ZUS6 474 aa4.53□□□□□ -1.68
CHD8-212ENST00000557329 SLC29A4Q7RTT9 530 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms