RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 PCDHB2Q9Y5E7 798 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 DNMT1P26358 1616 aaKnown RBP9.05□□□□□ -0.96
SYNE3-205ENST00000557275 SH2B2O14492 632 aaPredicted RBP9.05□□□□□ -0.96
SYNE3-205ENST00000557275 CLOCKO15516 846 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 STK4Q13043 487 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 COASYQ13057 564 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 RASA2Q15283 850 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 ZFP69Q49AA0 526 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 PACS1Q6VY07 963 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 SLC44A2Q8IWA5 706 aaPredicted RBP9.05□□□□□ -0.96
SYNE3-205ENST00000557275 SUCLG2Q96I99 432 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 C1QTNF7Q9BXJ2 289 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 METTL5Q9NRN9 209 aaKnown RBP9.05□□□□□ -0.96
SYNE3-205ENST00000557275 USP21Q9UK80 565 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 SNX7Q9UNH6 387 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 PLCL2Q9UPR0 1127 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 PCCAP05165 728 aaPredicted RBP9.05□□□□□ -0.96
SYNE3-205ENST00000557275 SKIV2L2P42285 1042 aaKnown RBP9.05□□□□□ -0.96
SYNE3-205ENST00000557275 GTF2IP78347 998 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 DHRSXQ8N5I4 330 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 COA7Q96BR5 231 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 TEKT5Q96M29 485 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 TCF7L2Q9NQB0 619 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 ATXN2Q99700 1313 aaKnown RBP9.05□□□□□ -0.96
SYNE3-205ENST00000557275 PSMC5P62195 406 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 SLC34A1Q06495 639 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 PRKAA1Q13131 559 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 PLET1Q6UQ28 207 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 FEM1BQ9UK73 627 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 FAM50BQ9Y247 325 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 KPNA3O00505 521 aaPredicted RBP9.05□□□□□ -0.96
SYNE3-205ENST00000557275 POU1F1P28069 291 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 PEX6Q13608 980 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 PLCZ1Q86YW0 608 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 SYTL1Q8IYJ3 562 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 NSUN7Q8NE18 718 aaKnown RBP9.05□□□□□ -0.96
SYNE3-205ENST00000557275 MND1Q9BWT6 205 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 PRDM16Q9HAZ2 1276 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 ZNF222Q9UK12 451 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 ABCB11O95342 1321 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 RGSL1A5PLK6 1076 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 PRLP01236 227 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 THRBP10828 461 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 CPB1P15086 417 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 HSD3B2P26439 372 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 GALNTL6Q49A17 601 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 ARHGAP15Q53QZ3 475 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 RASGEF1AQ8N9B8 481 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 AGPAT1Q99943 283 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 PTPRKQ15262 1439 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 TAF5LO75529 589 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 PTGS2P35354 604 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 SPDYCQ5MJ68 293 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 COLGALT2Q8IYK4 626 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 ZNF557Q8N988 423 aaPredicted RBP9.05□□□□□ -0.96
SYNE3-205ENST00000557275 UBDO15205 165 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 PRLRP16471 622 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 CEBPAP49715 358 aaPredicted RBP9.05□□□□□ -0.96
SYNE3-205ENST00000557275 GRSF1Q12849 480 aaKnown RBP eCLIP9.05□□□□□ -0.96
SYNE3-205ENST00000557275 NR1D2Q14995 579 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 DGKDQ16760 1214 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 LONRF1Q17RB8 773 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 MDH1BQ5I0G3 518 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 KCNH4Q9UQ05 1017 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 SHOC2Q9UQ13 582 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 C4orf46Q504U0 113 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 GTF3C2Q8WUA4 911 aaPredicted RBP9.05□□□□□ -0.96
SYNE3-205ENST00000557275 SDK1Q7Z5N4 2213 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 NOS1APO75052 506 aaPredicted RBP9.04□□□□□ -0.96
SYNE3-205ENST00000557275 SIN3BO75182 1162 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 SRP54P61011 504 aaKnown RBP9.04□□□□□ -0.96
SYNE3-205ENST00000557275 EMC1Q8N766 993 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 PDGFCQ9NRA1 345 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 THAP1Q9NVV9 213 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 PSME2Q9UL46 239 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 KDM5CP41229 1560 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 OR6A2O95222 327 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 CHRM3P20309 590 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 MYL6P60660 151 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 CHERPQ8IWX8 916 aaKnown RBP9.04□□□□□ -0.96
SYNE3-205ENST00000557275 ZNF302Q9NR11 478 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 AGO2Q9UKV8 859 aaKnown RBP9.04□□□□□ -0.96
SYNE3-205ENST00000557275 CASZ1Q86V15 1759 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 PDE8BO95263 885 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 GCLMP48507 274 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 HKDC1Q2TB90 917 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 ZNF394Q53GI3 561 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 SLC13A5Q86YT5 568 aaPredicted RBP9.04□□□□□ -0.96
SYNE3-205ENST00000557275 BORCS5Q969J3 196 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 PCDHGA3Q9Y5H0 932 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 MAGEB2O15479 319 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 EPB42P16452 691 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 OSTNP61366 133 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 GRIK3Q13003 919 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 FAM187BQ17R55 369 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 ERMARDQ5T6L9 678 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.04□□□□□ -0.96
SYNE3-205ENST00000557275 DHX40Q8IX18 779 aaKnown RBP9.04□□□□□ -0.96
SYNE3-205ENST00000557275 KLHL23Q8NBE8 558 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 SLC25A23Q9BV35 468 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms