RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 FAM84AQ96KN4 292 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 TNIP3Q96KP6 325 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 USP28Q96RU2 1077 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 C7orf25Q9BPX7 421 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 B3GNT5Q9BYG0 378 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 PANK2Q9BZ23 570 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 AGPAT3Q9NRZ7 376 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 MYOFQ9NZM1 2061 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 DEC1Q9P2X7 70 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 PILRBQ9UKJ0 227 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 MKL2Q9ULH7 1088 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 INVSQ9Y283 1065 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 NEUROG3Q9Y4Z2 214 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 TBC1D3BA6NDS4 549 aa9.17□□□□□ -0.94
VRK1-206ENST00000557222 TGFB1I1O43294 461 aa9.17□□□□□ -0.94
VRK1-206ENST00000557222 COCHO43405 550 aa9.17□□□□□ -0.94
VRK1-206ENST00000557222 ADAM23O75077 832 aa9.17□□□□□ -0.94
VRK1-206ENST00000557222 ZNF217O75362 1048 aa9.17□□□□□ -0.94
VRK1-206ENST00000557222 ABL1P00519 1130 aa9.17□□□□□ -0.94
VRK1-206ENST00000557222 SERPINF2P08697 491 aa9.17□□□□□ -0.94
VRK1-206ENST00000557222 DLATP10515 647 aaKnown RBP9.17□□□□□ -0.94
VRK1-206ENST00000557222 PDIA4P13667 645 aaKnown RBP9.17□□□□□ -0.94
VRK1-206ENST00000557222 HNRNPLP14866 589 aaKnown RBP eCLIP9.17□□□□□ -0.94
VRK1-206ENST00000557222 RDXP35241 583 aaKnown RBP9.17□□□□□ -0.94
VRK1-206ENST00000557222 PCBP4P57723 403 aaKnown RBP9.17□□□□□ -0.94
VRK1-206ENST00000557222 CEBPZQ03701 1054 aaKnown RBP9.17□□□□□ -0.94
VRK1-206ENST00000557222 EHHADHQ08426 723 aa9.17□□□□□ -0.94
VRK1-206ENST00000557222 SEMA3BQ13214 749 aa9.17□□□□□ -0.94
VRK1-206ENST00000557222 BMT2Q1RMZ1 405 aa9.17□□□□□ -0.94
VRK1-206ENST00000557222 FAM26FQ5R3K3 315 aa9.17□□□□□ -0.94
VRK1-206ENST00000557222 LYSMD4Q5XG99 296 aa9.17□□□□□ -0.94
VRK1-206ENST00000557222 UNC13DQ70J99 1090 aa9.17□□□□□ -0.94
VRK1-206ENST00000557222 PIP4P1Q86T03 277 aa9.17□□□□□ -0.94
VRK1-206ENST00000557222 ANKMY2Q8IV38 441 aa9.17□□□□□ -0.94
VRK1-206ENST00000557222 PDILTQ8N807 584 aa9.17□□□□□ -0.94
VRK1-206ENST00000557222 GATA6Q92908 595 aa9.17□□□□□ -0.94
VRK1-206ENST00000557222 HSH2DQ96JZ2 352 aa9.17□□□□□ -0.94
VRK1-206ENST00000557222 C2orf49Q9BVC5 232 aaPredicted RBP9.17□□□□□ -0.94
VRK1-206ENST00000557222 ZNF518BQ9C0D4 1074 aa9.17□□□□□ -0.94
VRK1-206ENST00000557222 XYLT2Q9H1B5 865 aa9.17□□□□□ -0.94
VRK1-206ENST00000557222 FBXO44Q9H4M3 255 aa9.17□□□□□ -0.94
VRK1-206ENST00000557222 DMAP1Q9NPF5 467 aaPredicted RBP9.17□□□□□ -0.94
VRK1-206ENST00000557222 SPHK2Q9NRA0 654 aa9.17□□□□□ -0.94
VRK1-206ENST00000557222 SMPD4Q9NXE4 827 aa9.17□□□□□ -0.94
VRK1-206ENST00000557222 BCCIPQ9P287 314 aaKnown RBP eCLIP9.17□□□□□ -0.94
VRK1-206ENST00000557222 MBD1Q9UIS9 605 aaPredicted RBP9.17□□□□□ -0.94
VRK1-206ENST00000557222 ZMIZ1Q9ULJ6 1067 aa9.17□□□□□ -0.94
VRK1-206ENST00000557222 SLC6A14Q9UN76 642 aa9.17□□□□□ -0.94
VRK1-206ENST00000557222 MTMR6Q9Y217 621 aa9.17□□□□□ -0.94
VRK1-206ENST00000557222 SH3BP1Q9Y3L3 701 aa9.17□□□□□ -0.94
VRK1-206ENST00000557222 NME7Q9Y5B8 376 aa9.17□□□□□ -0.94
VRK1-206ENST00000557222 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 PVALEFA0A1B0GWK0 134 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 TCRBV21S2A2A0A5A6 115 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 FAM221BA6H8Z2 402 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 C1QTNF9BB2RNN3 333 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 PATE3B3GLJ2 98 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 GFRA2O00451 464 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 SPTLC2O15270 562 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 TULP3O75386 442 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 C1QTNF9P0C862 333 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 P4HA1P13674 534 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 ENGP17813 658 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 TRIM21P19474 475 aaKnown RBP9.16□□□□□ -0.94
VRK1-206ENST00000557222 NTSR1P30989 418 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 PTGER3P43115 390 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 CACNA2D1P54289 1103 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 MYL6P60660 151 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 ASIC1P78348 528 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 GFPT1Q06210 699 aaPredicted RBP9.16□□□□□ -0.94
VRK1-206ENST00000557222 MESP2Q0VG99 397 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 SFSWAPQ12872 951 aaKnown RBP9.16□□□□□ -0.94
VRK1-206ENST00000557222 SLC14A1Q13336 389 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 STK38Q15208 465 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 EMC10Q5UCC4 262 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 FAM173BQ6P4H8 233 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 LINC00114Q6XXX2 140 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 HTR3DQ70Z44 454 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 UNC93AQ86WB7 457 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 C12orf40Q86WS4 652 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 TTC30AQ86WT1 665 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 TMEFF1Q8IYR6 380 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 ALDH16A1Q8IZ83 802 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 CRYBG2Q8N1P7 616 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 ZNF513Q8N8E2 541 aaPredicted RBP9.16□□□□□ -0.94
VRK1-206ENST00000557222 TERB1Q8NA31 727 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 GLIS3Q8NEA6 775 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 SCFD1Q8WVM8 642 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 HMGB4Q8WW32 186 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 RLN3Q8WXF3 142 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 CCDC127Q96BQ5 260 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 SMARCD1Q96GM5 515 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 ZNF396Q96N95 335 aaPredicted RBP9.16□□□□□ -0.94
VRK1-206ENST00000557222 DPEP3Q9H4B8 488 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 CSNK1G1Q9HCP0 422 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 TMEM74BQ9NUR3 256 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 TMEM30AQ9NV96 361 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 WDR35Q9P2L0 1181 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 CHORDC1Q9UHD1 332 aaPredicted RBP9.16□□□□□ -0.94
VRK1-206ENST00000557222 MSRB2Q9Y3D2 182 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms