RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 K7ERI5 159 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 EPHB6O15197 1021 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 ASAP2O43150 1006 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 PPFIA4O75335 1185 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 TACC1O75410 805 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 MAFO75444 373 aaPredicted RBP4.79□□□□□ -1.64
SRP54-212ENST00000556992 GGPS1O95749 300 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 PGK2P07205 417 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 TUBBP07437 444 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 ADH4P08319 380 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 ZBTB48P10074 688 aaPredicted RBP4.79□□□□□ -1.64
SRP54-212ENST00000556992 TXNP10599 105 aaKnown RBP4.79□□□□□ -1.64
SRP54-212ENST00000556992 PRLRP16471 622 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 PTPN1P18031 435 aaKnown RBP4.79□□□□□ -1.64
SRP54-212ENST00000556992 SLC9A1P19634 815 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 UBA1P22314 1058 aaKnown RBP4.79□□□□□ -1.64
SRP54-212ENST00000556992 ARL2P36404 184 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 ETV4P43268 484 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 NAMPTP43490 491 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 FMO5P49326 533 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 CASP4P49662 377 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 KIF11P52732 1056 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 VAV2P52735 878 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 GPR85P60893 370 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 SP4Q02446 784 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 KLHL30Q0D2K2 578 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 BFSP1Q12934 665 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 MXD4Q14582 209 aaPredicted RBP4.79□□□□□ -1.64
SRP54-212ENST00000556992 CCL15Q16663 113 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 WHAMMP3Q1A5X7 153 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 ASTE1Q2TB18 679 aaPredicted RBP4.79□□□□□ -1.64
SRP54-212ENST00000556992 DCAF17Q5H9S7 520 aaPredicted RBP4.79□□□□□ -1.64
SRP54-212ENST00000556992 WDR78Q5VTH9 848 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 PLA2G4FQ68DD2 849 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 CCDC62Q6P9F0 684 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 RSPO2Q6UXX9 243 aaPredicted RBP4.79□□□□□ -1.64
SRP54-212ENST00000556992 TRMT1LQ7Z2T5 733 aaKnown RBP4.79□□□□□ -1.64
SRP54-212ENST00000556992 IRF2BP2Q7Z5L9 587 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 CCDC60Q8IWA6 550 aaPredicted RBP4.79□□□□□ -1.64
SRP54-212ENST00000556992 GPR135Q8IZ08 494 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 PDCL2Q8N4E4 241 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 CEP112Q8N8E3 955 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 ACRBPQ8NEB7 543 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 TRIM58Q8NG06 486 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 DEPTORQ8TB45 409 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 ZNF483Q8TF39 744 aaPredicted RBP4.79□□□□□ -1.64
SRP54-212ENST00000556992 UBE2Q2Q8WVN8 375 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 LMBR1Q8WVP7 490 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 TCP11Q8WWU5 503 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 GLG1Q92896 1179 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 JAKMIP2Q96AA8 810 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 FAM81BQ96LP2 452 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 SPATA33Q96N06 139 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 WDR24Q96S15 920 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 NAPGQ99747 312 aaPredicted RBP4.79□□□□□ -1.64
SRP54-212ENST00000556992 AARSD1Q9BTE6 412 aaKnown RBP4.79□□□□□ -1.64
SRP54-212ENST00000556992 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.79□□□□□ -1.64
SRP54-212ENST00000556992 IFIH1Q9BYX4 1025 aaKnown RBP4.79□□□□□ -1.64
SRP54-212ENST00000556992 ZDHHC5Q9C0B5 715 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 INTS2Q9H0H0 1204 aaKnown RBP4.79□□□□□ -1.64
SRP54-212ENST00000556992 PORCNQ9H237 461 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 SMARCAD1Q9H4L7 1026 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 DHX33Q9H6R0 707 aaKnown RBP4.79□□□□□ -1.64
SRP54-212ENST00000556992 GBA2Q9HCG7 927 aaPredicted RBP4.79□□□□□ -1.64
SRP54-212ENST00000556992 TXNRD2Q9NNW7 524 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 NLRC4Q9NPP4 1024 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 PLA2G3Q9NZ20 509 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 MORF4L1Q9UBU8 362 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 CDC23Q9UJX2 597 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 ZNF215Q9UL58 517 aaPredicted RBP4.79□□□□□ -1.64
SRP54-212ENST00000556992 GUCA1BQ9UMX6 200 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 JRKLQ9Y4A0 524 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 IGSF9BQ9UPX0 1349 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 WDR90Q96KV7 1748 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 MYH1P12882 1939 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 GREB1LQ9C091 1923 aaPredicted RBP4.78□□□□□ -1.64
SRP54-212ENST00000556992 ANO9A1A5B4 782 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 TMEM150BA6NC51 233 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 BTNL10A8MVZ5 291 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 BTBD19C9JJ37 291 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 ANKRD63C9JTQ0 380 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 FAM47E-STBD1D6RA91 191 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 PJA2O43164 708 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 EXTL3O43909 919 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 TLR2O60603 784 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 LDHAP00338 332 aaKnown RBP4.78□□□□□ -1.64
SRP54-212ENST00000556992 ACTN1P12814 892 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 KRT15P19012 456 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 MAPK4P31152 587 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 SOX5P35711 763 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 TCF7P36402 384 aaPredicted RBP4.78□□□□□ -1.64
SRP54-212ENST00000556992 PRKCIP41743 596 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 AP3M2P53677 418 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 MFAP3P55082 362 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 ARID5AQ03989 594 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 RAPGEF1Q13905 1077 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 TFDP1Q14186 410 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 EMC2Q15006 297 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 ACAP1Q15027 740 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 PCOLCEQ15113 449 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms