RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 CLUHO75153 1309 aa11.01□□□□□ -0.65
ACTN1-216ENST00000556083 A0A087X1B8 175 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 A0A1W2PQ67 120 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 PIK3CDO00329 1044 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 MYCP01106 439 aaPredicted RBP11□□□□□ -0.65
ACTN1-216ENST00000556083 CNPP09543 421 aaKnown RBP11□□□□□ -0.65
ACTN1-216ENST00000556083 YWHAQP27348 245 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 TTKP33981 857 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 NUP62P37198 522 aaPredicted RBP11□□□□□ -0.65
ACTN1-216ENST00000556083 LAMTOR4Q0VGL1 99 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 MMRN1Q13201 1228 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 RRP1BQ14684 758 aaKnown RBP11□□□□□ -0.65
ACTN1-216ENST00000556083 R3HDM1Q15032 1099 aaKnown RBP11□□□□□ -0.65
ACTN1-216ENST00000556083 ATP6AP1LQ52LC2 224 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 NT5DC1Q5TFE4 455 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 ST13P5Q8NFI4 369 aaPredicted RBP11□□□□□ -0.65
ACTN1-216ENST00000556083 MKL1Q969V6 931 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 ZNF668Q96K58 619 aaPredicted RBP11□□□□□ -0.65
ACTN1-216ENST00000556083 BDH2Q9BUT1 245 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 ASCC2Q9H1I8 757 aaPredicted RBP11□□□□□ -0.65
ACTN1-216ENST00000556083 GPAMQ9HCL2 828 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 ADAM28Q9UKQ2 775 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 FAM50BQ9Y247 325 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 E9PCH4 1651 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 CYTH3O43739 400 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 MED24O75448 989 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 CCDC159P0C7I6 412 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 IRF1P10914 325 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 KCNA3P22001 575 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 CYP2A13Q16696 494 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 INTS11Q5TA45 600 aaKnown RBP11□□□□□ -0.65
ACTN1-216ENST00000556083 FAM43BQ6ZT52 329 aaPredicted RBP11□□□□□ -0.65
ACTN1-216ENST00000556083 MAP4K3Q8IVH8 894 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 FBXO36Q8NEA4 188 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 ACTRT2Q8TDY3 377 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 ATXN2LQ8WWM7 1075 aaKnown RBP11□□□□□ -0.65
ACTN1-216ENST00000556083 CYGBQ8WWM9 190 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 DLG3Q92796 817 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 ABCC13Q9NSE7 274 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 SFMBT1Q9UHJ3 866 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 VANGL2Q9ULK5 521 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 MFHAS1Q9Y4C4 1052 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 ACTL7BQ9Y614 415 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 ADCY6O43306 1168 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 STX11O75558 287 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 PDHA1P08559 390 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 CHI3L1P36222 383 aaPredicted RBP11□□□□□ -0.65
ACTN1-216ENST00000556083 TALDO1P37837 337 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 DSG1Q02413 1049 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 GRM3Q14832 879 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 MROH9Q5TGP6 573 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 SV2AQ7L0J3 742 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 CBWD2Q8IUF1 395 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 GSPT2Q8IYD1 628 aaKnown RBP11□□□□□ -0.65
ACTN1-216ENST00000556083 ZFYVE19Q96K21 471 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 UGT2B28Q9BY64 529 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 TMEM216Q9P0N5 145 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 ARHGAP28Q9P2N2 729 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 UBA2Q9UBT2 640 aaPredicted RBP11□□□□□ -0.65
ACTN1-216ENST00000556083 PHTF1Q9UMS5 762 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 ZNF510Q9Y2H8 683 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 A0A087X0T9 212 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 CAPN15O75808 1086 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 FAM228BP0C875 321 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 PPM1AP35813 382 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 TKTL1P51854 596 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 SGCGQ13326 291 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 PGM5Q15124 567 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 GRIK4Q16099 956 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 FAM98BQ52LJ0 330 aaKnown RBP11□□□□□ -0.65
ACTN1-216ENST00000556083 ACOT1Q86TX2 421 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 RXFP2Q8WXD0 754 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 OTULINQ96BN8 352 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 PPP1R10Q96QC0 940 aaKnown RBP11□□□□□ -0.65
ACTN1-216ENST00000556083 C2orf49Q9BVC5 232 aaPredicted RBP11□□□□□ -0.65
ACTN1-216ENST00000556083 CORO2BQ9UQ03 480 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 NRCAMQ92823 1304 aa11□□□□□ -0.65
ACTN1-216ENST00000556083 CTDNEP1O95476 244 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 ASGR1P07306 291 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 RPL9P32969 192 aaKnown RBP10.99□□□□□ -0.65
ACTN1-216ENST00000556083 RARRES1P49788 294 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 TMEM119Q4V9L6 283 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 WASHC2DQ5SRD0 308 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 BHLHB9Q6PI77 547 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 ILDR2Q71H61 639 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 ACTR8Q9H981 624 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 RUVBL2Q9Y230 463 aaKnown RBP10.99□□□□□ -0.65
ACTN1-216ENST00000556083 PNMA8CA0A1B0GUJ8 204 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 HTR7P34969 479 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 TIMM50Q3ZCQ8 353 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 CCDC92Q53HC0 331 aaPredicted RBP10.99□□□□□ -0.65
ACTN1-216ENST00000556083 SLC30A9Q6PML9 568 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 IFNEQ86WN2 208 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 MCOLN2Q8IZK6 566 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 NKAPQ8N5F7 415 aaKnown RBP10.99□□□□□ -0.65
ACTN1-216ENST00000556083 DPP10Q8N608 796 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 FAM120BQ96EK7 910 aaKnown RBP10.99□□□□□ -0.65
ACTN1-216ENST00000556083 OSBPL10Q9BXB5 764 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 TMBIM4Q9HC24 238 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 ATAD3AQ9NVI7 634 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms