RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 MROH8Q9H579 483 aa16.71■□□□□ 0.27
TUBB3-209ENST00000555609 PPARGC1AQ9UBK2 798 aaKnown RBP16.71■□□□□ 0.27
TUBB3-209ENST00000555609 CAPN9O14815 690 aa16.71■□□□□ 0.27
TUBB3-209ENST00000555609 GLRA3O75311 464 aa16.71■□□□□ 0.27
TUBB3-209ENST00000555609 CSDE1O75534 798 aaKnown RBP16.71■□□□□ 0.27
TUBB3-209ENST00000555609 KLHL2O95198 593 aa16.71■□□□□ 0.27
TUBB3-209ENST00000555609 MYL4P12829 197 aa16.71■□□□□ 0.27
TUBB3-209ENST00000555609 INSRRP14616 1297 aa16.71■□□□□ 0.27
TUBB3-209ENST00000555609 ACADSBP45954 432 aa16.71■□□□□ 0.27
TUBB3-209ENST00000555609 PPP1R26Q5T8A7 1209 aaPredicted RBP16.71■□□□□ 0.27
TUBB3-209ENST00000555609 DPH6Q7L8W6 267 aa16.71■□□□□ 0.27
TUBB3-209ENST00000555609 SLC26A9Q7LBE3 791 aa16.71■□□□□ 0.27
TUBB3-209ENST00000555609 WDR75Q8IWA0 830 aaKnown RBP16.71■□□□□ 0.27
TUBB3-209ENST00000555609 SCUBE1Q8IWY4 988 aa16.71■□□□□ 0.27
TUBB3-209ENST00000555609 LRRC52Q8N7C0 313 aa16.71■□□□□ 0.27
TUBB3-209ENST00000555609 SLC13A1Q9BZW2 595 aa16.71■□□□□ 0.27
TUBB3-209ENST00000555609 DCDC2Q9UHG0 476 aa16.71■□□□□ 0.27
TUBB3-209ENST00000555609 MAD1L1Q9Y6D9 718 aa16.71■□□□□ 0.27
TUBB3-209ENST00000555609 PAPSS1O43252 624 aaPredicted RBP16.7■□□□□ 0.26
TUBB3-209ENST00000555609 MAP3K7O43318 606 aa16.7■□□□□ 0.26
TUBB3-209ENST00000555609 KRT36O76013 467 aa16.7■□□□□ 0.26
TUBB3-209ENST00000555609 METTL18O95568 372 aa16.7■□□□□ 0.26
TUBB3-209ENST00000555609 AOC1P19801 751 aa16.7■□□□□ 0.26
TUBB3-209ENST00000555609 GRIK3Q13003 919 aa16.7■□□□□ 0.26
TUBB3-209ENST00000555609 GSTA3Q16772 222 aa16.7■□□□□ 0.26
TUBB3-209ENST00000555609 CA9Q16790 459 aa16.7■□□□□ 0.26
TUBB3-209ENST00000555609 HSF5Q4G112 596 aaPredicted RBP16.7■□□□□ 0.26
TUBB3-209ENST00000555609 HEATR6Q6AI08 1181 aaKnown RBP16.7■□□□□ 0.26
TUBB3-209ENST00000555609 LRRC8BQ6P9F7 803 aa16.7■□□□□ 0.26
TUBB3-209ENST00000555609 STRADAQ7RTN6 431 aa16.7■□□□□ 0.26
TUBB3-209ENST00000555609 ALYREFQ86V81 257 aaKnown RBP16.7■□□□□ 0.26
TUBB3-209ENST00000555609 TTC30AQ86WT1 665 aa16.7■□□□□ 0.26
TUBB3-209ENST00000555609 KIF12Q96FN5 646 aa16.7■□□□□ 0.26
TUBB3-209ENST00000555609 PIWIL1Q96J94 861 aaKnown RBP16.7■□□□□ 0.26
TUBB3-209ENST00000555609 FAM167BQ9BTA0 163 aa16.7■□□□□ 0.26
TUBB3-209ENST00000555609 RNPEPQ9H4A4 650 aa16.7■□□□□ 0.26
TUBB3-209ENST00000555609 GPATCH2LQ9NWQ4 482 aa16.7■□□□□ 0.26
TUBB3-209ENST00000555609 PLA2G4CQ9UP65 541 aa16.7■□□□□ 0.26
TUBB3-209ENST00000555609 PTPRFP10586 1907 aa16.7■□□□□ 0.26
TUBB3-209ENST00000555609 MGAMO43451 1857 aa16.7■□□□□ 0.26
TUBB3-209ENST00000555609 SDR42E2A6NKP2 422 aa16.69■□□□□ 0.26
TUBB3-209ENST00000555609 GRAP2O75791 330 aa16.69■□□□□ 0.26
TUBB3-209ENST00000555609 DGKIO75912 1065 aa16.69■□□□□ 0.26
TUBB3-209ENST00000555609 STK10O94804 968 aaKnown RBP16.69■□□□□ 0.26
TUBB3-209ENST00000555609 GRK2P25098 689 aa16.69■□□□□ 0.26
TUBB3-209ENST00000555609 RGS7P49802 495 aa16.69■□□□□ 0.26
TUBB3-209ENST00000555609 AQP5P55064 265 aa16.69■□□□□ 0.26
TUBB3-209ENST00000555609 RAB6CQ53S08 254 aa16.69■□□□□ 0.26
TUBB3-209ENST00000555609 FAXCQ5TGI0 409 aa16.69■□□□□ 0.26
TUBB3-209ENST00000555609 TTC7BQ86TV6 843 aa16.69■□□□□ 0.26
TUBB3-209ENST00000555609 ZNF410Q86VK4 478 aa16.69■□□□□ 0.26
TUBB3-209ENST00000555609 TFB1MQ8WVM0 346 aaKnown RBP16.69■□□□□ 0.26
TUBB3-209ENST00000555609 SCG3Q8WXD2 468 aaKnown RBP16.69■□□□□ 0.26
TUBB3-209ENST00000555609 PRR11Q96HE9 360 aaPredicted RBP16.69■□□□□ 0.26
TUBB3-209ENST00000555609 ZNF668Q96K58 619 aaPredicted RBP16.69■□□□□ 0.26
TUBB3-209ENST00000555609 RAB6CQ9H0N0 254 aa16.69■□□□□ 0.26
TUBB3-209ENST00000555609 PCMTD2Q9NV79 361 aa16.69■□□□□ 0.26
TUBB3-209ENST00000555609 AKT3Q9Y243 479 aa16.69■□□□□ 0.26
TUBB3-209ENST00000555609 A0A0A0MRY4 1105 aa16.69■□□□□ 0.26
TUBB3-209ENST00000555609 HMX2A2RU54 273 aa16.69■□□□□ 0.26
TUBB3-209ENST00000555609 TSPAN1O60635 241 aa16.69■□□□□ 0.26
TUBB3-209ENST00000555609 TBX10O75333 385 aa16.69■□□□□ 0.26
TUBB3-209ENST00000555609 FKBP6O75344 327 aa16.69■□□□□ 0.26
TUBB3-209ENST00000555609 GCLCP48506 637 aaPredicted RBP16.69■□□□□ 0.26
TUBB3-209ENST00000555609 AAGABQ6PD74 315 aa16.69■□□□□ 0.26
TUBB3-209ENST00000555609 KCNT2Q6UVM3 1135 aa16.69■□□□□ 0.26
TUBB3-209ENST00000555609 ADGRG6Q86SQ4 1221 aa16.69■□□□□ 0.26
TUBB3-209ENST00000555609 FBXO16Q8IX29 292 aaPredicted RBP16.69■□□□□ 0.26
TUBB3-209ENST00000555609 SHCBP1Q8NEM2 672 aa16.69■□□□□ 0.26
TUBB3-209ENST00000555609 WDR60Q8WVS4 1066 aa16.69■□□□□ 0.26
TUBB3-209ENST00000555609 CPB2Q96IY4 423 aa16.69■□□□□ 0.26
TUBB3-209ENST00000555609 HSFY1Q96LI6 401 aa16.69■□□□□ 0.26
TUBB3-209ENST00000555609 SPATA13Q96N96 652 aa16.69■□□□□ 0.26
TUBB3-209ENST00000555609 MECRQ9BV79 373 aa16.69■□□□□ 0.26
TUBB3-209ENST00000555609 AP4E1Q9UPM8 1137 aa16.69■□□□□ 0.26
TUBB3-209ENST00000555609 SF3B1O75533 1304 aaKnown RBP eCLIP16.69■□□□□ 0.263e-6■■■■■ 137.9
TUBB3-209ENST00000555609 PEX10O60683 326 aa16.68■□□□□ 0.26
TUBB3-209ENST00000555609 OPHN1O60890 802 aa16.68■□□□□ 0.26
TUBB3-209ENST00000555609 LGALS2P05162 132 aa16.68■□□□□ 0.26
TUBB3-209ENST00000555609 ENO1P06733 434 aaKnown RBP16.68■□□□□ 0.26
TUBB3-209ENST00000555609 PGK2P07205 417 aa16.68■□□□□ 0.26
TUBB3-209ENST00000555609 ACTR3P61158 418 aa16.68■□□□□ 0.26
TUBB3-209ENST00000555609 AP2B1P63010 937 aa16.68■□□□□ 0.26
TUBB3-209ENST00000555609 NIPAL4Q0D2K0 466 aa16.68■□□□□ 0.26
TUBB3-209ENST00000555609 BST2Q10589 180 aaKnown RBP16.68■□□□□ 0.26
TUBB3-209ENST00000555609 THOC5Q13769 683 aaKnown RBP16.68■□□□□ 0.26
TUBB3-209ENST00000555609 BMPR2Q13873 1038 aa16.68■□□□□ 0.26
TUBB3-209ENST00000555609 PPP6R3Q5H9R7 873 aaPredicted RBP16.68■□□□□ 0.26
TUBB3-209ENST00000555609 SYCP2LQ5T4T6 812 aa16.68■□□□□ 0.26
TUBB3-209ENST00000555609 MROH9Q5TGP6 573 aa16.68■□□□□ 0.26
TUBB3-209ENST00000555609 TMCO4Q5TGY1 634 aa16.68■□□□□ 0.26
TUBB3-209ENST00000555609 MYLK4Q86YV6 388 aaPredicted RBP16.68■□□□□ 0.26
TUBB3-209ENST00000555609 TREML1Q86YW5 311 aa16.68■□□□□ 0.26
TUBB3-209ENST00000555609 ADGRF2Q8IZF7 708 aa16.68■□□□□ 0.26
TUBB3-209ENST00000555609 C12orf29Q8N999 325 aa16.68■□□□□ 0.26
TUBB3-209ENST00000555609 ANKRD52Q8NB46 1076 aa16.68■□□□□ 0.26
TUBB3-209ENST00000555609 RBM15BQ8NDT2 890 aaKnown RBP16.68■□□□□ 0.26
TUBB3-209ENST00000555609 PPP1R14CQ8TAE6 165 aa16.68■□□□□ 0.26
TUBB3-209ENST00000555609 HTR3CQ8WXA8 447 aa16.68■□□□□ 0.26
TUBB3-209ENST00000555609 EMID1Q96A84 441 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms