RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 GREB1Q4ZG55 1949 aa10.6□□□□□ -0.71
SRP54-208ENST00000555557 ZNF638Q14966 1978 aaKnown RBP10.6□□□□□ -0.71
SRP54-208ENST00000555557 MYO16Q9Y6X6 1858 aa10.6□□□□□ -0.71
SRP54-208ENST00000555557 SPDYE4A6NLX3 237 aa10.6□□□□□ -0.71
SRP54-208ENST00000555557 KRIT1O00522 736 aa10.6□□□□□ -0.71
SRP54-208ENST00000555557 COCHO43405 550 aa10.6□□□□□ -0.71
SRP54-208ENST00000555557 ZMYND10O75800 440 aa10.6□□□□□ -0.71
SRP54-208ENST00000555557 IL4RP24394 825 aa10.6□□□□□ -0.71
SRP54-208ENST00000555557 GABRR2P28476 465 aa10.6□□□□□ -0.71
SRP54-208ENST00000555557 MRPS25P82663 173 aaKnown RBP10.6□□□□□ -0.71
SRP54-208ENST00000555557 CYP4F8P98187 520 aa10.6□□□□□ -0.71
SRP54-208ENST00000555557 DPYSL3Q14195 570 aa10.6□□□□□ -0.71
SRP54-208ENST00000555557 NAA30Q147X3 362 aaPredicted RBP10.6□□□□□ -0.71
SRP54-208ENST00000555557 TFDP3Q5H9I0 405 aa10.6□□□□□ -0.71
SRP54-208ENST00000555557 HECTD3Q5T447 861 aa10.6□□□□□ -0.71
SRP54-208ENST00000555557 SNX30Q5VWJ9 437 aa10.6□□□□□ -0.71
SRP54-208ENST00000555557 MSANTD2Q6P1R3 559 aa10.6□□□□□ -0.71
SRP54-208ENST00000555557 TMC8Q8IU68 726 aa10.6□□□□□ -0.71
SRP54-208ENST00000555557 ELMOD1Q8N336 334 aa10.6□□□□□ -0.71
SRP54-208ENST00000555557 C12orf76Q8N812 135 aaPredicted RBP10.6□□□□□ -0.71
SRP54-208ENST00000555557 NOA1Q8NC60 698 aaKnown RBP10.6□□□□□ -0.71
SRP54-208ENST00000555557 PDZD8Q8NEN9 1154 aa10.6□□□□□ -0.71
SRP54-208ENST00000555557 OVCA2Q8WZ82 227 aa10.6□□□□□ -0.71
SRP54-208ENST00000555557 SERPINB11Q96P15 392 aa10.6□□□□□ -0.71
SRP54-208ENST00000555557 KCTD15Q96SI1 283 aaPredicted RBP10.6□□□□□ -0.71
SRP54-208ENST00000555557 CYP2S1Q96SQ9 504 aa10.6□□□□□ -0.71
SRP54-208ENST00000555557 FAM118BQ9BPY3 351 aa10.6□□□□□ -0.71
SRP54-208ENST00000555557 NACA2Q9H009 215 aa10.6□□□□□ -0.71
SRP54-208ENST00000555557 PLEKHA4Q9H4M7 779 aa10.6□□□□□ -0.71
SRP54-208ENST00000555557 ZNF576Q9H609 170 aa10.6□□□□□ -0.71
SRP54-208ENST00000555557 PCDH18Q9HCL0 1135 aa10.6□□□□□ -0.71
SRP54-208ENST00000555557 MARCH2Q9P0N8 246 aa10.6□□□□□ -0.71
SRP54-208ENST00000555557 XPO7Q9UIA9 1087 aaKnown RBP10.6□□□□□ -0.71
SRP54-208ENST00000555557 ASB3Q9Y575 518 aa10.6□□□□□ -0.71
SRP54-208ENST00000555557 hCG_1818297A0A087WSY0 165 aa10.59□□□□□ -0.71
SRP54-208ENST00000555557 A0A1W2PRU2 124 aa10.59□□□□□ -0.71
SRP54-208ENST00000555557 SLC12A8A0AV02 714 aa10.59□□□□□ -0.71
SRP54-208ENST00000555557 FAM72CH0Y354 149 aa10.59□□□□□ -0.71
SRP54-208ENST00000555557 MOCS2O96007 188 aaPredicted RBP10.59□□□□□ -0.71
SRP54-208ENST00000555557 MYL4P12829 197 aa10.59□□□□□ -0.71
SRP54-208ENST00000555557 ATP5C1P36542 298 aaKnown RBP10.59□□□□□ -0.71
SRP54-208ENST00000555557 DYNLT1P63172 113 aa10.59□□□□□ -0.71
SRP54-208ENST00000555557 DUSP6Q16828 381 aa10.59□□□□□ -0.71
SRP54-208ENST00000555557 FAM72AQ5TYM5 149 aa10.59□□□□□ -0.71
SRP54-208ENST00000555557 TXNDC8Q6A555 127 aa10.59□□□□□ -0.71
SRP54-208ENST00000555557 FAM72DQ6L9T8 149 aa10.59□□□□□ -0.71
SRP54-208ENST00000555557 FAM72BQ86X60 149 aa10.59□□□□□ -0.71
SRP54-208ENST00000555557 VN1R2Q8NFZ6 395 aa10.59□□□□□ -0.71
SRP54-208ENST00000555557 SLC22A12Q96S37 553 aa10.59□□□□□ -0.71
SRP54-208ENST00000555557 LMAN2LQ9H0V9 348 aa10.59□□□□□ -0.71
SRP54-208ENST00000555557 TRPC7Q9HCX4 862 aa10.59□□□□□ -0.71
SRP54-208ENST00000555557 OLA1Q9NTK5 396 aaKnown RBP10.59□□□□□ -0.71
SRP54-208ENST00000555557 DNMT3BQ9UBC3 853 aaKnown RBP10.59□□□□□ -0.71
SRP54-208ENST00000555557 SAE1Q9UBE0 346 aaPredicted RBP10.59□□□□□ -0.71
SRP54-208ENST00000555557 UXTQ9UBK9 157 aaPredicted RBP10.59□□□□□ -0.71
SRP54-208ENST00000555557 COL4A4P53420 1690 aaPredicted RBP10.59□□□□□ -0.71
SRP54-208ENST00000555557 CCDC195A0A1B0GUA6 201 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 DYNC1I1O14576 645 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 CREB3O43889 395 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 GOT1P17174 413 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 CCR1P32246 355 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 CCR2P41597 374 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 KCNQ1P51787 676 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 TBX4P57082 545 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 NTHL1P78549 312 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 KLF1Q13351 362 aaPredicted RBP10.58□□□□□ -0.72
SRP54-208ENST00000555557 SIX1Q15475 284 aaPredicted RBP10.58□□□□□ -0.72
SRP54-208ENST00000555557 DPYSL2Q16555 572 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 EFHC2Q5JST6 749 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 STXBP5Q5T5C0 1151 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 ZNF572Q7Z3I7 529 aaPredicted RBP10.58□□□□□ -0.72
SRP54-208ENST00000555557 RFX6Q8HWS3 928 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 KLHL7Q8IXQ5 586 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 C1orf54Q8WWF1 131 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 HAUS1Q96CS2 278 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 MRPL38Q96DV4 380 aaKnown RBP10.58□□□□□ -0.72
SRP54-208ENST00000555557 TCEAL4Q96EI5 215 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 SLC39A13Q96H72 371 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 FCRL2Q96LA5 508 aaPredicted RBP10.58□□□□□ -0.72
SRP54-208ENST00000555557 SIK2Q9H0K1 926 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 ATXN3LQ9H3M9 355 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 ASAH2Q9NR71 780 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 GKN1Q9NS71 199 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 ARHGEF38Q9NXL2 777 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 CWC15Q9P013 229 aaKnown RBP10.58□□□□□ -0.72
SRP54-208ENST00000555557 DNMT3LQ9UJW3 386 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 TLR6Q9Y2C9 796 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 R3HDM2Q9Y2K5 976 aaKnown RBP10.58□□□□□ -0.72
SRP54-208ENST00000555557 TRANK1O15050 2925 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 KCNU1A8MYU2 1149 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 CST8O60676 142 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 PAGE1O75459 146 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 OAS1P00973 400 aaKnown RBP10.58□□□□□ -0.72
SRP54-208ENST00000555557 CETN2P41208 172 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 COPS2P61201 443 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 PDK2Q15119 407 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 TAZQ16635 292 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 ARL13BQ3SXY8 428 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 PABPC1LQ4VXU2 614 aaKnown RBP10.58□□□□□ -0.72
SRP54-208ENST00000555557 ANKRD20A8PQ5CZ79 823 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms