RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 CALCOCO1Q9P1Z2 691 aa13.21□□□□□ -0.29
SYNE2-219ENST00000555323 STOML2Q9UJZ1 356 aa13.21□□□□□ -0.29
SYNE2-219ENST00000555323 ADGRG1Q9Y653 693 aa13.21□□□□□ -0.29
SYNE2-219ENST00000555323 BTNL10A8MVZ5 291 aa13.2□□□□□ -0.3
SYNE2-219ENST00000555323 KCNU1A8MYU2 1149 aa13.2□□□□□ -0.3
SYNE2-219ENST00000555323 CHADO15335 359 aa13.2□□□□□ -0.3
SYNE2-219ENST00000555323 MSI1O43347 362 aaKnown RBP13.2□□□□□ -0.3
SYNE2-219ENST00000555323 LATS1O95835 1130 aa13.2□□□□□ -0.3
SYNE2-219ENST00000555323 SLC2A3P11169 496 aa13.2□□□□□ -0.3
SYNE2-219ENST00000555323 TFE3P19532 575 aaPredicted RBP13.2□□□□□ -0.3
SYNE2-219ENST00000555323 CXCR3P49682 368 aa13.2□□□□□ -0.3
SYNE2-219ENST00000555323 SULT1E1P49888 294 aa13.2□□□□□ -0.3
SYNE2-219ENST00000555323 VAV2P52735 878 aa13.2□□□□□ -0.3
SYNE2-219ENST00000555323 MTA1Q13330 715 aa13.2□□□□□ -0.3
SYNE2-219ENST00000555323 PIGHQ14442 188 aaPredicted RBP13.2□□□□□ -0.3
SYNE2-219ENST00000555323 PPP2R5DQ14738 602 aa13.2□□□□□ -0.3
SYNE2-219ENST00000555323 NUGGCQ68CJ6 796 aa13.2□□□□□ -0.3
SYNE2-219ENST00000555323 ZNF662Q6ZS27 426 aa13.2□□□□□ -0.3
SYNE2-219ENST00000555323 NIPA2Q8N8Q9 360 aa13.2□□□□□ -0.3
SYNE2-219ENST00000555323 ADAM32Q8TC27 787 aa13.2□□□□□ -0.3
SYNE2-219ENST00000555323 RSAD2Q8WXG1 361 aa13.2□□□□□ -0.3
SYNE2-219ENST00000555323 RFFLQ8WZ73 363 aa13.2□□□□□ -0.3
SYNE2-219ENST00000555323 WBP2Q969T9 261 aa13.2□□□□□ -0.3
SYNE2-219ENST00000555323 OTUB2Q96DC9 234 aa13.2□□□□□ -0.3
SYNE2-219ENST00000555323 CALR3Q96L12 384 aaKnown RBP13.2□□□□□ -0.3
SYNE2-219ENST00000555323 NCAPGQ9BPX3 1015 aa13.2□□□□□ -0.3
SYNE2-219ENST00000555323 TRIM7Q9C029 511 aa13.2□□□□□ -0.3
SYNE2-219ENST00000555323 TRPV5Q9NQA5 729 aa13.2□□□□□ -0.3
SYNE2-219ENST00000555323 THG1LQ9NWX6 298 aaKnown RBP13.2□□□□□ -0.3
SYNE2-219ENST00000555323 DDIT4Q9NX09 232 aa13.2□□□□□ -0.3
SYNE2-219ENST00000555323 CFAP97Q9P2B7 532 aa13.2□□□□□ -0.3
SYNE2-219ENST00000555323 TBC1D14Q9P2M4 693 aa13.2□□□□□ -0.3
SYNE2-219ENST00000555323 LCMT1Q9UIC8 334 aa13.2□□□□□ -0.3
SYNE2-219ENST00000555323 ZNF510Q9Y2H8 683 aa13.2□□□□□ -0.3
SYNE2-219ENST00000555323 SH3BP1Q9Y3L3 701 aa13.2□□□□□ -0.3
SYNE2-219ENST00000555323 MYO16Q9Y6X6 1858 aa13.2□□□□□ -0.3
SYNE2-219ENST00000555323 RCCD1A6NED2 376 aa13.19□□□□□ -0.3
SYNE2-219ENST00000555323 MYO1FO00160 1098 aa13.19□□□□□ -0.3
SYNE2-219ENST00000555323 SLC9A3R1O14745 358 aaPredicted RBP13.19□□□□□ -0.3
SYNE2-219ENST00000555323 CCR1P32246 355 aa13.19□□□□□ -0.3
SYNE2-219ENST00000555323 RDXP35241 583 aaKnown RBP13.19□□□□□ -0.3
SYNE2-219ENST00000555323 ARHGAP25P42331 645 aa13.19□□□□□ -0.3
SYNE2-219ENST00000555323 HARS2P49590 506 aaKnown RBP13.19□□□□□ -0.3
SYNE2-219ENST00000555323 HDAC4P56524 1084 aa13.19□□□□□ -0.3
SYNE2-219ENST00000555323 DEUP1Q05D60 604 aa13.19□□□□□ -0.3
SYNE2-219ENST00000555323 ZNF252P-AS1Q0IIN9 211 aa13.19□□□□□ -0.3
SYNE2-219ENST00000555323 C15orf59Q2T9L4 293 aaPredicted RBP13.19□□□□□ -0.3
SYNE2-219ENST00000555323 ARHGAP29Q52LW3 1261 aa13.19□□□□□ -0.3
SYNE2-219ENST00000555323 BRMS1LQ5PSV4 323 aa13.19□□□□□ -0.3
SYNE2-219ENST00000555323 SH3PXD2AQ5TCZ1 1133 aa13.19□□□□□ -0.3
SYNE2-219ENST00000555323 FAM217AQ8IXS0 508 aa13.19□□□□□ -0.3
SYNE2-219ENST00000555323 ADGRG2Q8IZP9 1017 aa13.19□□□□□ -0.3
SYNE2-219ENST00000555323 GJD3Q8N144 294 aa13.19□□□□□ -0.3
SYNE2-219ENST00000555323 TXLNBQ8N3L3 684 aa13.19□□□□□ -0.3
SYNE2-219ENST00000555323 ARFGAP1Q8N6T3 406 aa13.19□□□□□ -0.3
SYNE2-219ENST00000555323 ACRBPQ8NEB7 543 aa13.19□□□□□ -0.3
SYNE2-219ENST00000555323 ZNF564Q8TBZ8 553 aaPredicted RBP13.19□□□□□ -0.3
SYNE2-219ENST00000555323 OSCP1Q8WVF1 389 aa13.19□□□□□ -0.3
SYNE2-219ENST00000555323 KXD1Q9BQD3 176 aa13.19□□□□□ -0.3
SYNE2-219ENST00000555323 TRMT61BQ9BVS5 477 aaKnown RBP13.19□□□□□ -0.3
SYNE2-219ENST00000555323 LACRTQ9GZZ8 138 aa13.19□□□□□ -0.3
SYNE2-219ENST00000555323 KCNF1Q9H3M0 494 aa13.19□□□□□ -0.3
SYNE2-219ENST00000555323 WDCPQ9H6R7 721 aa13.19□□□□□ -0.3
SYNE2-219ENST00000555323 OSGEPQ9NPF4 335 aa13.19□□□□□ -0.3
SYNE2-219ENST00000555323 PIGVQ9NUD9 493 aa13.19□□□□□ -0.3
SYNE2-219ENST00000555323 ARHGEF38Q9NXL2 777 aa13.19□□□□□ -0.3
SYNE2-219ENST00000555323 CTTNBP2NLQ9P2B4 639 aa13.19□□□□□ -0.3
SYNE2-219ENST00000555323 IP6K2Q9UHH9 426 aa13.19□□□□□ -0.3
SYNE2-219ENST00000555323 PAXBP1Q9Y5B6 917 aa13.19□□□□□ -0.3
SYNE2-219ENST00000555323 UNC80Q8N2C7 3258 aa13.19□□□□□ -0.3
SYNE2-219ENST00000555323 NUP210Q8TEM1 1887 aaPredicted RBP13.19□□□□□ -0.3
SYNE2-219ENST00000555323 ARNTLO00327 626 aa13.18□□□□□ -0.3
SYNE2-219ENST00000555323 GFRA2O00451 464 aa13.18□□□□□ -0.3
SYNE2-219ENST00000555323 CCP110O43303 1012 aa13.18□□□□□ -0.3
SYNE2-219ENST00000555323 PTMAP06454 111 aaKnown RBP13.18□□□□□ -0.3
SYNE2-219ENST00000555323 PSMA2P25787 234 aa13.18□□□□□ -0.3
SYNE2-219ENST00000555323 PCK1P35558 622 aa13.18□□□□□ -0.3
SYNE2-219ENST00000555323 ATP11AP98196 1134 aa13.18□□□□□ -0.3
SYNE2-219ENST00000555323 NME3Q13232 169 aa13.18□□□□□ -0.3
SYNE2-219ENST00000555323 TDGQ13569 410 aa13.18□□□□□ -0.3
SYNE2-219ENST00000555323 ZC3H12AQ5D1E8 599 aaKnown RBP13.18□□□□□ -0.3
SYNE2-219ENST00000555323 ACBD5Q5T8D3 534 aaPredicted RBP13.18□□□□□ -0.3
SYNE2-219ENST00000555323 SND1Q7KZF4 910 aaKnown RBP eCLIP13.18□□□□□ -0.3
SYNE2-219ENST00000555323 ST13P5Q8NFI4 369 aaPredicted RBP13.18□□□□□ -0.3
SYNE2-219ENST00000555323 FAM172AQ8WUF8 416 aa13.18□□□□□ -0.3
SYNE2-219ENST00000555323 C1orf74Q96LT6 269 aa13.18□□□□□ -0.3
SYNE2-219ENST00000555323 IRX2Q9BZI1 471 aaPredicted RBP13.18□□□□□ -0.3
SYNE2-219ENST00000555323 LINC00597Q9H2U6 94 aa13.18□□□□□ -0.3
SYNE2-219ENST00000555323 FAM204AQ9H8W3 233 aa13.18□□□□□ -0.3
SYNE2-219ENST00000555323 CD320Q9NPF0 282 aa13.18□□□□□ -0.3
SYNE2-219ENST00000555323 ANAPC7Q9UJX3 599 aa13.18□□□□□ -0.3
SYNE2-219ENST00000555323 LSM7Q9UK45 103 aaKnown RBP13.18□□□□□ -0.3
SYNE2-219ENST00000555323 AGO1Q9UL18 857 aaKnown RBP13.18□□□□□ -0.3
SYNE2-219ENST00000555323 ACSL4O60488 711 aa13.17□□□□□ -0.3
SYNE2-219ENST00000555323 RNF8O76064 485 aa13.17□□□□□ -0.3
SYNE2-219ENST00000555323 ASGR2P07307 311 aa13.17□□□□□ -0.3
SYNE2-219ENST00000555323 HMBSP08397 361 aa13.17□□□□□ -0.3
SYNE2-219ENST00000555323 DESP17661 470 aa13.17□□□□□ -0.3
SYNE2-219ENST00000555323 CORO1AP31146 461 aaKnown RBP13.17□□□□□ -0.3
SYNE2-219ENST00000555323 CHKAP35790 457 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms