RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 LOC730098B7Z3J9 87 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 LEFTY2O00292 366 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 CCP110O43303 1012 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 ZSCAN12O43309 604 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 STC2O76061 302 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 HARS2P49590 506 aaKnown RBP17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 CXCR3P49682 368 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 PITX1P78337 314 aaPredicted RBP17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 ATP11AP98196 1134 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 ZNF252P-AS1Q0IIN9 211 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 ZNF77Q15935 545 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 ACBD5Q5T8D3 534 aaPredicted RBP17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 HTR3DQ70Z44 454 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 RNF10Q8N5U6 811 aaKnown RBP17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 ADAM32Q8TC27 787 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 ADAMTS19Q8TE59 1207 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 FAM172AQ8WUF8 416 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 DEPDC1BQ8WUY9 529 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 RPGRIP1Q96KN7 1286 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 ASB2Q96Q27 587 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 TRIM7Q9C029 511 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 OSGEPQ9NPF4 335 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 GKN1Q9NS71 199 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 IGSF9Q9P2J2 1179 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 CCL26Q9Y258 94 aa17.11■□□□□ 0.33
SPTLC2-203ENST00000554901 MSI1O43347 362 aaKnown RBP17.1■□□□□ 0.33
SPTLC2-203ENST00000554901 PROSCO94903 275 aa17.1■□□□□ 0.33
SPTLC2-203ENST00000554901 APOEP02649 317 aa17.1■□□□□ 0.33
SPTLC2-203ENST00000554901 PCK1P35558 622 aa17.1■□□□□ 0.33
SPTLC2-203ENST00000554901 NOP2P46087 812 aaKnown RBP17.1■□□□□ 0.33
SPTLC2-203ENST00000554901 KCNQ1P51787 676 aa17.1■□□□□ 0.33
SPTLC2-203ENST00000554901 AIF1P55008 147 aa17.1■□□□□ 0.33
SPTLC2-203ENST00000554901 ZXDBP98169 803 aa17.1■□□□□ 0.33
SPTLC2-203ENST00000554901 NME3Q13232 169 aa17.1■□□□□ 0.33
SPTLC2-203ENST00000554901 HTR4Q13639 388 aa17.1■□□□□ 0.33
SPTLC2-203ENST00000554901 C15orf59Q2T9L4 293 aaPredicted RBP17.1■□□□□ 0.33
SPTLC2-203ENST00000554901 BPIFB1Q8TDL5 484 aa17.1■□□□□ 0.33
SPTLC2-203ENST00000554901 FCRL2Q96LA5 508 aaPredicted RBP17.1■□□□□ 0.33
SPTLC2-203ENST00000554901 SMG9Q9H0W8 520 aaKnown RBP17.1■□□□□ 0.33
SPTLC2-203ENST00000554901 PIGVQ9NUD9 493 aa17.1■□□□□ 0.33
SPTLC2-203ENST00000554901 CFAP97Q9P2B7 532 aa17.1■□□□□ 0.33
SPTLC2-203ENST00000554901 TBC1D14Q9P2M4 693 aa17.1■□□□□ 0.33
SPTLC2-203ENST00000554901 SLC12A6Q9UHW9 1150 aa17.1■□□□□ 0.33
SPTLC2-203ENST00000554901 SH3BP1Q9Y3L3 701 aa17.1■□□□□ 0.33
SPTLC2-203ENST00000554901 SPTBN5Q9NRC6 3674 aaKnown RBP17.09■□□□□ 0.33
SPTLC2-203ENST00000554901 HEPACAM2A8MVW5 462 aa17.09■□□□□ 0.33
SPTLC2-203ENST00000554901 SLC9A3R1O14745 358 aaPredicted RBP17.09■□□□□ 0.33
SPTLC2-203ENST00000554901 TFE3P19532 575 aaPredicted RBP17.09■□□□□ 0.33
SPTLC2-203ENST00000554901 HDAC4P56524 1084 aa17.09■□□□□ 0.33
SPTLC2-203ENST00000554901 FCHO2Q0JRZ9 810 aa17.09■□□□□ 0.33
SPTLC2-203ENST00000554901 CDO1Q16878 200 aa17.09■□□□□ 0.33
SPTLC2-203ENST00000554901 TANGO2Q6ICL3 276 aa17.09■□□□□ 0.33
SPTLC2-203ENST00000554901 MFSD6LQ8IWD5 586 aa17.09■□□□□ 0.33
SPTLC2-203ENST00000554901 UBE2Q2Q8WVN8 375 aa17.09■□□□□ 0.33
SPTLC2-203ENST00000554901 OTUB2Q96DC9 234 aa17.09■□□□□ 0.33
SPTLC2-203ENST00000554901 BTN2A3PQ96KV6 586 aa17.09■□□□□ 0.33
SPTLC2-203ENST00000554901 ADAM33Q9BZ11 813 aa17.09■□□□□ 0.33
SPTLC2-203ENST00000554901 WDCPQ9H6R7 721 aa17.09■□□□□ 0.33
SPTLC2-203ENST00000554901 THG1LQ9NWX6 298 aaKnown RBP17.09■□□□□ 0.33
SPTLC2-203ENST00000554901 COL6A3P12111 3177 aa17.09■□□□□ 0.33
SPTLC2-203ENST00000554901 KCNU1A8MYU2 1149 aa17.08■□□□□ 0.32
SPTLC2-203ENST00000554901 GREM1O60565 184 aa17.08■□□□□ 0.32
SPTLC2-203ENST00000554901 BMP1P13497 986 aa17.08■□□□□ 0.32
SPTLC2-203ENST00000554901 VIPR2P41587 438 aa17.08■□□□□ 0.32
SPTLC2-203ENST00000554901 SLC1A1P43005 524 aa17.08■□□□□ 0.32
SPTLC2-203ENST00000554901 SLC11A2P49281 568 aa17.08■□□□□ 0.32
SPTLC2-203ENST00000554901 ZP2Q05996 745 aa17.08■□□□□ 0.32
SPTLC2-203ENST00000554901 ARL13BQ3SXY8 428 aa17.08■□□□□ 0.32
SPTLC2-203ENST00000554901 ARHGAP29Q52LW3 1261 aa17.08■□□□□ 0.32
SPTLC2-203ENST00000554901 ZC3H12AQ5D1E8 599 aaKnown RBP17.08■□□□□ 0.32
SPTLC2-203ENST00000554901 C11orf63Q6NUN7 778 aa17.08■□□□□ 0.32
SPTLC2-203ENST00000554901 CC2D1AQ6P1N0 951 aaPredicted RBP17.08■□□□□ 0.32
SPTLC2-203ENST00000554901 PARM1Q6UWI2 310 aa17.08■□□□□ 0.32
SPTLC2-203ENST00000554901 Q6ZNB5 142 aa17.08■□□□□ 0.32
SPTLC2-203ENST00000554901 ATP6V0D2Q8N8Y2 350 aa17.08■□□□□ 0.32
SPTLC2-203ENST00000554901 FGF14Q92915 247 aa17.08■□□□□ 0.32
SPTLC2-203ENST00000554901 RNF34Q969K3 372 aa17.08■□□□□ 0.32
SPTLC2-203ENST00000554901 NTAN1Q96AB6 310 aa17.08■□□□□ 0.32
SPTLC2-203ENST00000554901 IRX2Q9BZI1 471 aaPredicted RBP17.08■□□□□ 0.32
SPTLC2-203ENST00000554901 ARHGEF38Q9NXL2 777 aa17.08■□□□□ 0.32
SPTLC2-203ENST00000554901 CALCOCO1Q9P1Z2 691 aa17.08■□□□□ 0.32
SPTLC2-203ENST00000554901 STOML2Q9UJZ1 356 aa17.08■□□□□ 0.32
SPTLC2-203ENST00000554901 TFR2Q9UP52 801 aa17.08■□□□□ 0.32
SPTLC2-203ENST00000554901 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.08■□□□□ 0.32
SPTLC2-203ENST00000554901 DUSP10Q9Y6W6 482 aa17.08■□□□□ 0.32
SPTLC2-203ENST00000554901 HELZP42694 1942 aaKnown RBP17.08■□□□□ 0.32
SPTLC2-203ENST00000554901 SYNJ2BP-COX16A0A087WUM0 186 aa17.07■□□□□ 0.32
SPTLC2-203ENST00000554901 GOLGA6L9A6NEM1 432 aa17.07■□□□□ 0.32
SPTLC2-203ENST00000554901 LRCH4O75427 683 aa17.07■□□□□ 0.32
SPTLC2-203ENST00000554901 HMBSP08397 361 aa17.07■□□□□ 0.32
SPTLC2-203ENST00000554901 PSMC3P17980 439 aa17.07■□□□□ 0.32
SPTLC2-203ENST00000554901 CORO1AP31146 461 aaKnown RBP17.07■□□□□ 0.32
SPTLC2-203ENST00000554901 SH3PXD2AQ5TCZ1 1133 aa17.07■□□□□ 0.32
SPTLC2-203ENST00000554901 VITQ6UXI7 678 aa17.07■□□□□ 0.32
SPTLC2-203ENST00000554901 PSTKQ8IV42 348 aaKnown RBP17.07■□□□□ 0.32
SPTLC2-203ENST00000554901 TPCN2Q8NHX9 752 aa17.07■□□□□ 0.32
SPTLC2-203ENST00000554901 RSPRY1Q96DX4 576 aa17.07■□□□□ 0.32
SPTLC2-203ENST00000554901 COX16Q9P0S2 106 aa17.07■□□□□ 0.32
SPTLC2-203ENST00000554901 SALL4Q9UJQ4 1053 aa17.07■□□□□ 0.32
SPTLC2-203ENST00000554901 NUMBLQ9Y6R0 609 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms