RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 GUCY2FP51841 1108 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 FKBP1BP68106 108 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 SLC6A3Q01959 620 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 TRAP1Q12931 704 aaKnown RBP3.57□□□□□ -1.84
SEC23A-207ENST00000554615 SPARCL1Q14515 664 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 PKN2Q16513 984 aaKnown RBP3.57□□□□□ -1.84
SEC23A-207ENST00000554615 ZNF658BQ4V348 819 aaPredicted RBP3.57□□□□□ -1.84
SEC23A-207ENST00000554615 BOLA3Q53S33 107 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 PIGGQ5H8A4 983 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 SPANXN3Q5MJ09 141 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 RAP1GAP2Q684P5 730 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 FAM45BPQ6NSW5 357 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 C3orf62Q6ZUJ4 267 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 TRIM42Q8IWZ5 723 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 KBTBD2Q8IY47 623 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 COLGALT2Q8IYK4 626 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 ARHGAP24Q8N264 748 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 MFSD2AQ8NA29 543 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 JOSD2Q8TAC2 188 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 FAM45AQ8TCE6 357 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 ATG4CQ96DT6 458 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 PPP1R2P1Q96PQ5 205 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 RMDN3Q96TC7 470 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 GPR22Q99680 433 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 IMPG2Q9BZV3 1241 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 CHRDQ9H2X0 955 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 MEAF6Q9HAF1 191 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 PDFQ9HBH1 243 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 PRDM5Q9NQX1 630 aaPredicted RBP3.57□□□□□ -1.84
SEC23A-207ENST00000554615 INTS9Q9NV88 658 aaKnown RBP3.57□□□□□ -1.84
SEC23A-207ENST00000554615 RBAKQ9NYW8 714 aaPredicted RBP3.57□□□□□ -1.84
SEC23A-207ENST00000554615 ANAPC5Q9UJX4 755 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 AGO1Q9UL18 857 aaKnown RBP3.57□□□□□ -1.84
SEC23A-207ENST00000554615 GOLGA6L7A0A1B0GV03 622 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 TTC24A2A3L6 582 aaPredicted RBP3.57□□□□□ -1.84
SEC23A-207ENST00000554615 MARCH6O60337 910 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 FKBP6O75344 327 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 ARHGEF15O94989 841 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 APOEP02649 317 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 FGF4P08620 206 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 FGFR4P22455 802 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 ARNTP27540 789 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 PEX3P56589 373 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 ITGA9Q13797 1035 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 STXBP2Q15833 593 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 PSMD5Q16401 504 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 UGT3A2Q3SY77 523 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 FAM160B1Q5W0V3 765 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 PRR23BQ6ZRT6 265 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 RINLQ6ZS11 566 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 CDHR3Q6ZTQ4 885 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 ACAD11Q709F0 780 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 SPNS2Q8IVW8 549 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 UNC45BQ8IWX7 931 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 KLHL7Q8IXQ5 586 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 RAVER1Q8IY67 606 aaKnown RBP3.57□□□□□ -1.84
SEC23A-207ENST00000554615 GPR65Q8IYL9 337 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 TMEM35BQ8NCS4 154 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 GSTCDQ8NEC7 633 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 JADE3Q92613 823 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 RBM15Q96T37 977 aaKnown RBP eCLIP3.57□□□□□ -1.84
SEC23A-207ENST00000554615 RTKNQ9BST9 563 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 TBC1D10AQ9BXI6 508 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 DENND2DQ9H6A0 471 aaPredicted RBP3.57□□□□□ -1.84
SEC23A-207ENST00000554615 LRRC4Q9HBW1 653 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 C1orf112Q9NSG2 853 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 ARMC1Q9NVT9 282 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 SNTG2Q9NY99 539 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 DNMT3BQ9UBC3 853 aaKnown RBP3.57□□□□□ -1.84
SEC23A-207ENST00000554615 GABBR1Q9UBS5 961 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 HACL1Q9UJ83 578 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 ANAPC7Q9UJX3 599 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 CAPN7Q9Y6W3 813 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 TTC3P53804 2025 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 COL27A1Q8IZC6 1860 aaPredicted RBP3.57□□□□□ -1.84
SEC23A-207ENST00000554615 DRGXA6NNA5 263 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 AP3B1O00203 1094 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 LUC7L3O95232 432 aaKnown RBP3.57□□□□□ -1.84
SEC23A-207ENST00000554615 NEFHP12036 1026 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 CXCR3P49682 368 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 IL9RQ01113 521 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 MAP2K1Q02750 393 aaPredicted RBP3.57□□□□□ -1.84
SEC23A-207ENST00000554615 PTPN11Q06124 597 aaPredicted RBP3.57□□□□□ -1.84
SEC23A-207ENST00000554615 FOXM1Q08050 763 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 PICALMQ13492 652 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 BAATQ14032 418 aaPredicted RBP3.57□□□□□ -1.84
SEC23A-207ENST00000554615 HIC1Q14526 733 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 CCDC153Q494R4 210 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 ACCSLQ4AC99 568 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 TDRD12Q587J7 1177 aaKnown RBP3.57□□□□□ -1.84
SEC23A-207ENST00000554615 ZC3HC1Q86WB0 502 aaKnown RBP3.57□□□□□ -1.84
SEC23A-207ENST00000554615 DNAAF5Q86Y56 855 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 LRRC49Q8IUZ0 686 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 LRRC43Q8N309 656 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 GALNT15Q8N3T1 639 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 OTUD6BQ8N6M0 293 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 PACRGLQ8N7B6 248 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 BEST2Q8NFU1 509 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 STYXQ8WUJ0 223 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 SEPT1Q8WYJ6 367 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms