RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 LRFN1Q9P244 771 aa5.83□□□□□ -1.48
SCFD1-211ENST00000554437 CCDC187A0A096LP49 1063 aa5.82□□□□□ -1.48
SCFD1-211ENST00000554437 TMEM232C9JQI7 657 aa5.82□□□□□ -1.48
SCFD1-211ENST00000554437 MASP2O00187 686 aa5.82□□□□□ -1.48
SCFD1-211ENST00000554437 CTIFO43310 598 aaKnown RBP5.82□□□□□ -1.48
SCFD1-211ENST00000554437 MBPP02686 304 aaPredicted RBP5.82□□□□□ -1.48
SCFD1-211ENST00000554437 CYP2D6P10635 497 aa5.82□□□□□ -1.48
SCFD1-211ENST00000554437 CYP2A6P11509 494 aaPredicted RBP5.82□□□□□ -1.48
SCFD1-211ENST00000554437 KLRK1P26718 216 aa5.82□□□□□ -1.48
SCFD1-211ENST00000554437 AKT1P31749 480 aa5.82□□□□□ -1.48
SCFD1-211ENST00000554437 GALNT1Q10472 559 aaPredicted RBP5.82□□□□□ -1.48
SCFD1-211ENST00000554437 BLMHQ13867 455 aa5.82□□□□□ -1.48
SCFD1-211ENST00000554437 CCDC38Q502W7 563 aa5.82□□□□□ -1.48
SCFD1-211ENST00000554437 CC2D1BQ5T0F9 858 aaKnown RBP5.82□□□□□ -1.48
SCFD1-211ENST00000554437 MSANTD2Q6P1R3 559 aa5.82□□□□□ -1.48
SCFD1-211ENST00000554437 TICAM2Q86XR7 235 aa5.82□□□□□ -1.48
SCFD1-211ENST00000554437 C16orf71Q8IYS4 520 aaPredicted RBP5.82□□□□□ -1.48
SCFD1-211ENST00000554437 NRSN1Q8IZ57 195 aa5.82□□□□□ -1.48
SCFD1-211ENST00000554437 NTN5Q8WTR8 489 aaPredicted RBP5.82□□□□□ -1.48
SCFD1-211ENST00000554437 WDR60Q8WVS4 1066 aa5.82□□□□□ -1.48
SCFD1-211ENST00000554437 DPF1Q92782 380 aa5.82□□□□□ -1.48
SCFD1-211ENST00000554437 KAZALD1Q96I82 304 aa5.82□□□□□ -1.48
SCFD1-211ENST00000554437 ARPC5LQ9BPX5 153 aa5.82□□□□□ -1.48
SCFD1-211ENST00000554437 RXFP3Q9NSD7 469 aa5.82□□□□□ -1.48
SCFD1-211ENST00000554437 SCAF8Q9UPN6 1271 aaKnown RBP5.82□□□□□ -1.48
SCFD1-211ENST00000554437 WIPF3A6NGB9 483 aa5.81□□□□□ -1.48
SCFD1-211ENST00000554437 SYT5O00445 386 aa5.81□□□□□ -1.48
SCFD1-211ENST00000554437 FCHO1O14526 889 aa5.81□□□□□ -1.48
SCFD1-211ENST00000554437 CER1O95813 267 aa5.81□□□□□ -1.48
SCFD1-211ENST00000554437 CSTBP04080 98 aaKnown RBP5.81□□□□□ -1.48
SCFD1-211ENST00000554437 ATF7P17544 494 aaPredicted RBP5.81□□□□□ -1.48
SCFD1-211ENST00000554437 WDR5P61964 334 aaKnown RBP5.81□□□□□ -1.48
SCFD1-211ENST00000554437 CCDC174Q6PII3 467 aa5.81□□□□□ -1.48
SCFD1-211ENST00000554437 TMED8Q6PL24 325 aaPredicted RBP5.81□□□□□ -1.48
SCFD1-211ENST00000554437 RANBP10Q6VN20 620 aa5.81□□□□□ -1.48
SCFD1-211ENST00000554437 SLC22A17Q8WUG5 538 aa5.81□□□□□ -1.48
SCFD1-211ENST00000554437 HIC2Q96JB3 615 aa5.81□□□□□ -1.48
SCFD1-211ENST00000554437 C5orf34Q96MH7 638 aa5.81□□□□□ -1.48
SCFD1-211ENST00000554437 RMDN3Q96TC7 470 aa5.81□□□□□ -1.48
SCFD1-211ENST00000554437 TP63Q9H3D4 680 aaPredicted RBP5.81□□□□□ -1.48
SCFD1-211ENST00000554437 ABHD10Q9NUJ1 306 aa5.81□□□□□ -1.48
SCFD1-211ENST00000554437 DACT1Q9NYF0 836 aa5.81□□□□□ -1.48
SCFD1-211ENST00000554437 PCDHB7Q9Y5E2 793 aa5.81□□□□□ -1.48
SCFD1-211ENST00000554437 M0QZQ0 153 aa5.8□□□□□ -1.48
SCFD1-211ENST00000554437 TRIM38O00635 465 aa5.8□□□□□ -1.48
SCFD1-211ENST00000554437 SLC3A2P08195 630 aaKnown RBP5.8□□□□□ -1.48
SCFD1-211ENST00000554437 MATN1P21941 496 aa5.8□□□□□ -1.48
SCFD1-211ENST00000554437 DUSP1P28562 367 aa5.8□□□□□ -1.48
SCFD1-211ENST00000554437 SERPINF1P36955 418 aa5.8□□□□□ -1.48
SCFD1-211ENST00000554437 TRAPPC10P48553 1259 aa5.8□□□□□ -1.48
SCFD1-211ENST00000554437 SLC14A1Q13336 389 aa5.8□□□□□ -1.48
SCFD1-211ENST00000554437 CBFBQ13951 182 aa5.8□□□□□ -1.48
SCFD1-211ENST00000554437 CNGA3Q16281 694 aa5.8□□□□□ -1.48
SCFD1-211ENST00000554437 ACSM6Q6P461 480 aa5.8□□□□□ -1.48
SCFD1-211ENST00000554437 ZNF66Q6ZN08 573 aa5.8□□□□□ -1.48
SCFD1-211ENST00000554437 OR52L2PQ8NGH6 319 aa5.8□□□□□ -1.48
SCFD1-211ENST00000554437 MORC4Q8TE76 937 aa5.8□□□□□ -1.48
SCFD1-211ENST00000554437 DDB2Q92466 427 aa5.8□□□□□ -1.48
SCFD1-211ENST00000554437 LTV1Q96GA3 475 aaPredicted RBP5.8□□□□□ -1.48
SCFD1-211ENST00000554437 EFHD1Q9BUP0 239 aa5.8□□□□□ -1.48
SCFD1-211ENST00000554437 KATNAL1Q9BW62 490 aa5.8□□□□□ -1.48
SCFD1-211ENST00000554437 PRDM16Q9HAZ2 1276 aa5.8□□□□□ -1.48
SCFD1-211ENST00000554437 UBE2J1Q9Y385 318 aaPredicted RBP5.8□□□□□ -1.48
SCFD1-211ENST00000554437 SPATA31A1Q5TZJ5 1347 aa5.79□□□□□ -1.48
SCFD1-211ENST00000554437 TTC34A8MYJ7 566 aa5.79□□□□□ -1.48
SCFD1-211ENST00000554437 ACKR2O00590 384 aa5.79□□□□□ -1.48
SCFD1-211ENST00000554437 RPP40O75818 363 aaKnown RBP5.79□□□□□ -1.48
SCFD1-211ENST00000554437 RNF8O76064 485 aa5.79□□□□□ -1.48
SCFD1-211ENST00000554437 ITGA2BP08514 1039 aa5.79□□□□□ -1.48
SCFD1-211ENST00000554437 GYS1P13807 737 aa5.79□□□□□ -1.48
SCFD1-211ENST00000554437 MPGP29372 298 aa5.79□□□□□ -1.48
SCFD1-211ENST00000554437 SRSF4Q08170 494 aaKnown RBP5.79□□□□□ -1.48
SCFD1-211ENST00000554437 KRT72Q14CN4 511 aa5.79□□□□□ -1.48
SCFD1-211ENST00000554437 PFKFB3Q16875 520 aaPredicted RBP5.79□□□□□ -1.48
SCFD1-211ENST00000554437 FAM83BQ5T0W9 1011 aa5.79□□□□□ -1.48
SCFD1-211ENST00000554437 ATPAF1Q5TC12 328 aaPredicted RBP5.79□□□□□ -1.48
SCFD1-211ENST00000554437 C8orf58Q8NAV2 365 aa5.79□□□□□ -1.48
SCFD1-211ENST00000554437 AKAP1Q92667 903 aaKnown RBP eCLIP5.79□□□□□ -1.48
SCFD1-211ENST00000554437 EID2BQ96D98 161 aa5.79□□□□□ -1.48
SCFD1-211ENST00000554437 MCRS1Q96EZ8 462 aa5.79□□□□□ -1.48
SCFD1-211ENST00000554437 PAAF1Q9BRP4 392 aa5.79□□□□□ -1.48
SCFD1-211ENST00000554437 ADARB2Q9NS39 739 aaKnown RBP5.79□□□□□ -1.48
SCFD1-211ENST00000554437 MAFFQ9ULX9 164 aa5.79□□□□□ -1.48
SCFD1-211ENST00000554437 HEMK1Q9Y5R4 338 aaPredicted RBP5.79□□□□□ -1.48
SCFD1-211ENST00000554437 LATS1O95835 1130 aa5.78□□□□□ -1.48
SCFD1-211ENST00000554437 CERS1P27544 350 aa5.78□□□□□ -1.48
SCFD1-211ENST00000554437 CHKAP35790 457 aa5.78□□□□□ -1.48
SCFD1-211ENST00000554437 VPS41P49754 854 aa5.78□□□□□ -1.48
SCFD1-211ENST00000554437 C21orf58P58505 322 aa5.78□□□□□ -1.48
SCFD1-211ENST00000554437 FOXF2Q12947 444 aa5.78□□□□□ -1.48
SCFD1-211ENST00000554437 KPNB1Q14974 876 aaKnown RBP5.78□□□□□ -1.48
SCFD1-211ENST00000554437 PDCD2Q16342 344 aaPredicted RBP5.78□□□□□ -1.48
SCFD1-211ENST00000554437 BTBD16Q32M84 506 aa5.78□□□□□ -1.48
SCFD1-211ENST00000554437 TUBB8Q3ZCM7 444 aa5.78□□□□□ -1.48
SCFD1-211ENST00000554437 CEP78Q5JTW2 689 aa5.78□□□□□ -1.48
SCFD1-211ENST00000554437 ANKRD40Q6AI12 368 aa5.78□□□□□ -1.48
SCFD1-211ENST00000554437 MIS18BP1Q6P0N0 1132 aa5.78□□□□□ -1.48
SCFD1-211ENST00000554437 KLHL17Q6TDP4 642 aa5.78□□□□□ -1.48
SCFD1-211ENST00000554437 C16orf89Q6UX73 402 aa5.78□□□□□ -1.48
SCFD1-211ENST00000554437 TRABD2AQ86V40 505 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms