RNA–Protein interactions for RNA: ENST00000554171.1

LRFN5-204, Transcript of leucine rich repeat and fibronectin type III domain containing 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRFN5, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN5-204ENST00000554171 KRT2P35908 639 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 CLK3P49761 638 aaKnown RBP4.03□□□□□ -1.76
LRFN5-204ENST00000554171 FXR2P51116 673 aaKnown RBP eCLIP4.03□□□□□ -1.76
LRFN5-204ENST00000554171 DGKEP52429 567 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 UBE2HP62256 183 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 TRIM25Q14258 630 aaKnown RBP4.03□□□□□ -1.76
LRFN5-204ENST00000554171 PLS1Q14651 629 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 AOC3Q16853 763 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 TUSC1Q2TAM9 212 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 CFAP100Q494V2 611 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 ZSCAN25Q6NSZ9 544 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 DNAJC10Q8IXB1 793 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 PCYOX1LQ8NBM8 494 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 CEP70Q8NHQ1 597 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 CALML6Q8TD86 181 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 SLC26A7Q8TE54 656 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 SPACA9Q96E40 222 aaPredicted RBP4.03□□□□□ -1.76
LRFN5-204ENST00000554171 TRIM47Q96LD4 638 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 UBXN10Q96LJ8 280 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 ZCCHC4Q9H5U6 513 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 CCDC86Q9H6F5 360 aaKnown RBP4.03□□□□□ -1.76
LRFN5-204ENST00000554171 KAT14Q9H8E8 782 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 TMEM8AQ9HCN3 771 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.03□□□□□ -1.76
LRFN5-204ENST00000554171 NOVA2Q9UNW9 492 aaKnown RBP4.03□□□□□ -1.76
LRFN5-204ENST00000554171 DENND4BO75064 1496 aaPredicted RBP4.03□□□□□ -1.76
LRFN5-204ENST00000554171 ADCY9O60503 1353 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 A0A0G2JMP0 313 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 EFCAB8A8MWE9 144 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 PER2O15055 1255 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 AQP9O43315 295 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 TSPAN2O60636 221 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 ATP2C2O75185 946 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 CDH16O75309 829 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 BMP10O95393 424 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 QDPRP09417 244 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 SNRPA1P09661 255 aaKnown RBP4.03□□□□□ -1.76
LRFN5-204ENST00000554171 PRPS2P11908 318 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 IFNAR1P17181 557 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 ATP6V1C1P21283 382 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 IFNA8P32881 189 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 GRIA2P42262 883 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 PIP4K2AP48426 406 aaPredicted RBP4.03□□□□□ -1.76
LRFN5-204ENST00000554171 STARP49675 285 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 GDI2P50395 445 aaKnown RBP4.03□□□□□ -1.76
LRFN5-204ENST00000554171 ATXN1P54253 815 aaKnown RBP4.03□□□□□ -1.76
LRFN5-204ENST00000554171 ERVK-21P61565 698 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 RNF4P78317 190 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 C2orf54Q08AI8 447 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 PUM1Q14671 1186 aaKnown RBP eCLIP4.03□□□□□ -1.76
LRFN5-204ENST00000554171 FIGNQ5HY92 759 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 SLX4IPQ5VYV7 408 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 CAVIN1Q6NZI2 390 aaKnown RBP4.03□□□□□ -1.76
LRFN5-204ENST00000554171 MSANTD1Q6ZTZ1 278 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 BTLAQ7Z6A9 289 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 ADCK1Q86TW2 530 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 ZNF354CQ86Y25 554 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 SLC9A9Q8IVB4 645 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 MCATQ8IVS2 390 aaKnown RBP4.03□□□□□ -1.76
LRFN5-204ENST00000554171 GSTCDQ8NEC7 633 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 C17orf47Q8NEP4 570 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 HDAC10Q969S8 669 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 ATP6V1E2Q96A05 226 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 RBM4BQ9BQ04 359 aaKnown RBP4.03□□□□□ -1.76
LRFN5-204ENST00000554171 CRB3Q9BUF7 120 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 RBM4Q9BWF3 364 aaKnown RBP4.03□□□□□ -1.76
LRFN5-204ENST00000554171 TINAGL1Q9GZM7 467 aaPredicted RBP4.03□□□□□ -1.76
LRFN5-204ENST00000554171 SLC6A17Q9H1V8 727 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 RYDENQ9NUL5 291 aaKnown RBP4.03□□□□□ -1.76
LRFN5-204ENST00000554171 ZSWIM5Q9P217 1185 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 LIMD1Q9UGP4 676 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 ENTPD4Q9Y227 616 aa4.03□□□□□ -1.76
LRFN5-204ENST00000554171 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.03□□□□□ -1.76
LRFN5-204ENST00000554171 ARGFXA6NJG6 315 aa4.02□□□□□ -1.77
LRFN5-204ENST00000554171 ERVH48-1M5A8F1 160 aa4.02□□□□□ -1.77
LRFN5-204ENST00000554171 TOR1AO14656 332 aa4.02□□□□□ -1.77
LRFN5-204ENST00000554171 APOL1O14791 398 aa4.02□□□□□ -1.77
LRFN5-204ENST00000554171 BUB1BO60566 1050 aaPredicted RBP4.02□□□□□ -1.77
LRFN5-204ENST00000554171 SULT1C4O75897 302 aa4.02□□□□□ -1.77
LRFN5-204ENST00000554171 IQCF3P0C7M6 154 aa4.02□□□□□ -1.77
LRFN5-204ENST00000554171 PRKCIP41743 596 aa4.02□□□□□ -1.77
LRFN5-204ENST00000554171 SLC1A1P43005 524 aa4.02□□□□□ -1.77
LRFN5-204ENST00000554171 AIF1P55008 147 aa4.02□□□□□ -1.77
LRFN5-204ENST00000554171 ACTR1AP61163 376 aa4.02□□□□□ -1.77
LRFN5-204ENST00000554171 CREMQ03060 361 aa4.02□□□□□ -1.77
LRFN5-204ENST00000554171 PRKCQQ04759 706 aa4.02□□□□□ -1.77
LRFN5-204ENST00000554171 SPARCL1Q14515 664 aa4.02□□□□□ -1.77
LRFN5-204ENST00000554171 RPS6KA2Q15349 733 aa4.02□□□□□ -1.77
LRFN5-204ENST00000554171 SEC23BQ15437 767 aa4.02□□□□□ -1.77
LRFN5-204ENST00000554171 WDR72Q3MJ13 1102 aa4.02□□□□□ -1.77
LRFN5-204ENST00000554171 ANKRD20A2Q5SQ80 823 aa4.02□□□□□ -1.77
LRFN5-204ENST00000554171 ANKRD20A1Q5TYW2 823 aa4.02□□□□□ -1.77
LRFN5-204ENST00000554171 ANKRD20A3Q5VUR7 823 aa4.02□□□□□ -1.77
LRFN5-204ENST00000554171 SHQ1Q6PI26 577 aaKnown RBP4.02□□□□□ -1.77
LRFN5-204ENST00000554171 BHLHA15Q7RTS1 189 aaPredicted RBP4.02□□□□□ -1.77
LRFN5-204ENST00000554171 RIC3Q7Z5B4 369 aa4.02□□□□□ -1.77
LRFN5-204ENST00000554171 NECAB2Q7Z6G3 386 aa4.02□□□□□ -1.77
LRFN5-204ENST00000554171 HOMER1Q86YM7 354 aa4.02□□□□□ -1.77
LRFN5-204ENST00000554171 HPS6Q86YV9 775 aa4.02□□□□□ -1.77
LRFN5-204ENST00000554171 CAMK1DQ8IU85 385 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms