RNA–Protein interactions for RNA: ENST00000554124.2

STRN3-204, Transcript of striatin 3, humanhuman

TSL 4

Gene STRN3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-204ENST00000554124 CEP170BQ9Y4F5 1589 aaPredicted RBP4.41□□□□□ -1.7
STRN3-204ENST00000554124 MYMKA6NI61 221 aa4.41□□□□□ -1.7
STRN3-204ENST00000554124 TRIM38O00635 465 aa4.41□□□□□ -1.7
STRN3-204ENST00000554124 APOL1O14791 398 aa4.41□□□□□ -1.7
STRN3-204ENST00000554124 HNRNPDLO14979 420 aaKnown RBP4.41□□□□□ -1.7
STRN3-204ENST00000554124 AREL1O15033 823 aa4.41□□□□□ -1.7
STRN3-204ENST00000554124 THAP12O43422 761 aa4.41□□□□□ -1.7
STRN3-204ENST00000554124 TCEA3O75764 348 aa4.41□□□□□ -1.7
STRN3-204ENST00000554124 SLC11A2P49281 568 aa4.41□□□□□ -1.7
STRN3-204ENST00000554124 SP2Q02086 613 aa4.41□□□□□ -1.7
STRN3-204ENST00000554124 FHL1Q13642 323 aa4.41□□□□□ -1.7
STRN3-204ENST00000554124 DHX8Q14562 1220 aaKnown RBP4.41□□□□□ -1.7
STRN3-204ENST00000554124 ZRSR2Q15696 482 aaKnown RBP4.41□□□□□ -1.7
STRN3-204ENST00000554124 MGAT5BQ3V5L5 792 aa4.41□□□□□ -1.7
STRN3-204ENST00000554124 FAM83BQ5T0W9 1011 aa4.41□□□□□ -1.7
STRN3-204ENST00000554124 L1TD1Q5T7N2 865 aaKnown RBP4.41□□□□□ -1.7
STRN3-204ENST00000554124 C1orf228Q6PIY5 440 aa4.41□□□□□ -1.7
STRN3-204ENST00000554124 TECPR1Q7Z6L1 1165 aa4.41□□□□□ -1.7
STRN3-204ENST00000554124 MRPL10Q7Z7H8 261 aaKnown RBP4.41□□□□□ -1.7
STRN3-204ENST00000554124 CERS3Q8IU89 383 aa4.41□□□□□ -1.7
STRN3-204ENST00000554124 CELF5Q8N6W0 485 aaKnown RBP4.41□□□□□ -1.7
STRN3-204ENST00000554124 TERB1Q8NA31 727 aa4.41□□□□□ -1.7
STRN3-204ENST00000554124 PIGOQ8TEQ8 1089 aa4.41□□□□□ -1.7
STRN3-204ENST00000554124 OSCP1Q8WVF1 389 aa4.41□□□□□ -1.7
STRN3-204ENST00000554124 SOCS4Q8WXH5 440 aa4.41□□□□□ -1.7
STRN3-204ENST00000554124 CUL5Q93034 780 aa4.41□□□□□ -1.7
STRN3-204ENST00000554124 IQCDQ96DY2 449 aa4.41□□□□□ -1.7
STRN3-204ENST00000554124 RITA1Q96K30 269 aa4.41□□□□□ -1.7
STRN3-204ENST00000554124 SNX18Q96RF0 628 aa4.41□□□□□ -1.7
STRN3-204ENST00000554124 WDR12Q9GZL7 423 aaKnown RBP4.41□□□□□ -1.7
STRN3-204ENST00000554124 DHX36Q9H2U1 1008 aaKnown RBP4.41□□□□□ -1.7
STRN3-204ENST00000554124 PDGFCQ9NRA1 345 aa4.41□□□□□ -1.7
STRN3-204ENST00000554124 SACM1LQ9NTJ5 587 aa4.41□□□□□ -1.7
STRN3-204ENST00000554124 XPR1Q9UBH6 696 aa4.41□□□□□ -1.7
STRN3-204ENST00000554124 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.41□□□□□ -1.7
STRN3-204ENST00000554124 SIGLEC1Q9BZZ2 1709 aa4.41□□□□□ -1.7
STRN3-204ENST00000554124 ROCK2O75116 1388 aaKnown RBP4.4□□□□□ -1.7
STRN3-204ENST00000554124 PLEKHG1Q9ULL1 1385 aa4.4□□□□□ -1.7
STRN3-204ENST00000554124 NINLQ9Y2I6 1382 aa4.4□□□□□ -1.7
STRN3-204ENST00000554124 PIK3C2GO75747 1445 aa4.4□□□□□ -1.7
STRN3-204ENST00000554124 PYCARD-AS1I3L0S3 204 aa4.4□□□□□ -1.71
STRN3-204ENST00000554124 DSCR3O14972 297 aa4.4□□□□□ -1.71
STRN3-204ENST00000554124 CCP110O43303 1012 aa4.4□□□□□ -1.71
STRN3-204ENST00000554124 PPM1AP35813 382 aa4.4□□□□□ -1.71
STRN3-204ENST00000554124 NR4A2P43354 598 aa4.4□□□□□ -1.71
STRN3-204ENST00000554124 RPS16P62249 146 aaKnown RBP4.4□□□□□ -1.71
STRN3-204ENST00000554124 TNFAIP2Q03169 654 aa4.4□□□□□ -1.71
STRN3-204ENST00000554124 CHAF1AQ13111 956 aaPredicted RBP4.4□□□□□ -1.71
STRN3-204ENST00000554124 STK3Q13188 491 aa4.4□□□□□ -1.71
STRN3-204ENST00000554124 CTBP1Q13363 440 aa4.4□□□□□ -1.71
STRN3-204ENST00000554124 DAZAP2Q15038 168 aaPredicted RBP4.4□□□□□ -1.71
STRN3-204ENST00000554124 RABEP1Q15276 862 aa4.4□□□□□ -1.71
STRN3-204ENST00000554124 ZNF260Q3ZCT1 412 aa4.4□□□□□ -1.71
STRN3-204ENST00000554124 DEPDC1Q5TB30 811 aa4.4□□□□□ -1.71
STRN3-204ENST00000554124 USP17L6PQ6QN14 398 aa4.4□□□□□ -1.71
STRN3-204ENST00000554124 GAS2L3Q86XJ1 694 aa4.4□□□□□ -1.71
STRN3-204ENST00000554124 KRT73Q86Y46 540 aa4.4□□□□□ -1.71
STRN3-204ENST00000554124 TMEM41AQ96HV5 264 aa4.4□□□□□ -1.71
STRN3-204ENST00000554124 SNX22Q96L94 193 aa4.4□□□□□ -1.71
STRN3-204ENST00000554124 FYTTD1Q96QD9 318 aaKnown RBP4.4□□□□□ -1.71
STRN3-204ENST00000554124 WACQ9BTA9 647 aa4.4□□□□□ -1.71
STRN3-204ENST00000554124 KRTAP1-5Q9BYS1 174 aa4.4□□□□□ -1.71
STRN3-204ENST00000554124 CIPCQ9C0C6 399 aa4.4□□□□□ -1.71
STRN3-204ENST00000554124 SPRTNQ9H040 489 aaPredicted RBP4.4□□□□□ -1.71
STRN3-204ENST00000554124 XPNPEP3Q9NQH7 507 aa4.4□□□□□ -1.71
STRN3-204ENST00000554124 TM7SF3Q9NS93 570 aa4.4□□□□□ -1.71
STRN3-204ENST00000554124 TRNAU1APQ9NX07 287 aaKnown RBP4.4□□□□□ -1.71
STRN3-204ENST00000554124 ZSCAN32Q9NX65 697 aa4.4□□□□□ -1.71
STRN3-204ENST00000554124 FNIP2Q9P278 1114 aa4.4□□□□□ -1.71
STRN3-204ENST00000554124 CAPN11Q9UMQ6 739 aa4.4□□□□□ -1.71
STRN3-204ENST00000554124 RALGAPBQ86X10 1494 aa4.4□□□□□ -1.71
STRN3-204ENST00000554124 POLR1AO95602 1720 aaPredicted RBP4.4□□□□□ -1.71
STRN3-204ENST00000554124 NEXMIFQ5QGS0 1516 aa4.4□□□□□ -1.71
STRN3-204ENST00000554124 DLC1Q96QB1 1528 aa4.4□□□□□ -1.71
STRN3-204ENST00000554124 FAM135BQ49AJ0 1406 aa4.39□□□□□ -1.71
STRN3-204ENST00000554124 SCAF11Q99590 1463 aaKnown RBP4.39□□□□□ -1.71
STRN3-204ENST00000554124 F8W8V4 182 aa4.39□□□□□ -1.71
STRN3-204ENST00000554124 PSMD9O00233 223 aa4.39□□□□□ -1.71
STRN3-204ENST00000554124 SOCS2O14508 198 aa4.39□□□□□ -1.71
STRN3-204ENST00000554124 BCAR3O75815 825 aa4.39□□□□□ -1.71
STRN3-204ENST00000554124 MT-ND5P03915 603 aa4.39□□□□□ -1.71
STRN3-204ENST00000554124 TXNP10599 105 aaKnown RBP4.39□□□□□ -1.71
STRN3-204ENST00000554124 MYL4P12829 197 aa4.39□□□□□ -1.71
STRN3-204ENST00000554124 FGFR2P21802 821 aa4.39□□□□□ -1.71
STRN3-204ENST00000554124 SFPQP23246 707 aaKnown RBP eCLIP4.39□□□□□ -1.71
STRN3-204ENST00000554124 IL1R2P27930 398 aa4.39□□□□□ -1.71
STRN3-204ENST00000554124 TECP42680 631 aa4.39□□□□□ -1.71
STRN3-204ENST00000554124 MYO1EQ12965 1108 aa4.39□□□□□ -1.71
STRN3-204ENST00000554124 ZNF268Q14587 947 aaPredicted RBP4.39□□□□□ -1.71
STRN3-204ENST00000554124 PDCD2Q16342 344 aaPredicted RBP4.39□□□□□ -1.71
STRN3-204ENST00000554124 ARL13BQ3SXY8 428 aa4.39□□□□□ -1.71
STRN3-204ENST00000554124 FCRL6Q6DN72 434 aa4.39□□□□□ -1.71
STRN3-204ENST00000554124 AWAT2Q6E213 333 aa4.39□□□□□ -1.71
STRN3-204ENST00000554124 HIBCHQ6NVY1 386 aaPredicted RBP4.39□□□□□ -1.71
STRN3-204ENST00000554124 ERAP2Q6P179 960 aa4.39□□□□□ -1.71
STRN3-204ENST00000554124 YAF2Q8IY57 180 aa4.39□□□□□ -1.71
STRN3-204ENST00000554124 CCDC33Q8N5R6 958 aa4.39□□□□□ -1.71
STRN3-204ENST00000554124 NANOGP1Q8N7R0 232 aa4.39□□□□□ -1.71
STRN3-204ENST00000554124 DNAJC5GQ8N7S2 189 aa4.39□□□□□ -1.71
STRN3-204ENST00000554124 SPSB4Q96A44 273 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms