RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 C7P10643 843 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 CORO1AP31146 461 aaKnown RBP6.92□□□□□ -1.3
SLIRP-203ENST00000554074 PTGER3P43115 390 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 FMO5P49326 533 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 TKTL1P51854 596 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 MFAP3P55082 362 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 IRX4P78413 519 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 PDE4CQ08493 712 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 CETN1Q12798 172 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 EFEMP1Q12805 493 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 EIF4HQ15056 248 aaKnown RBP6.92□□□□□ -1.3
SLIRP-203ENST00000554074 STILQ15468 1287 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 TRIP4Q15650 581 aaPredicted RBP6.92□□□□□ -1.3
SLIRP-203ENST00000554074 DUOXA1Q1HG43 343 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 GOLGA7BQ2TAP0 167 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 PKDCCQ504Y2 493 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 TRIM61Q5EBN2 209 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 N4BP2L1Q5TBK1 243 aaPredicted RBP6.92□□□□□ -1.3
SLIRP-203ENST00000554074 LCLAT1Q6UWP7 414 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 TOGARAM2Q6ZUX3 1019 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 RSRC2Q7L4I2 434 aaKnown RBP6.92□□□□□ -1.3
SLIRP-203ENST00000554074 BHLHA9Q7RTU4 235 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 PGBD3Q8N328 593 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 RBBP8NLQ8NC74 664 aaPredicted RBP6.92□□□□□ -1.3
SLIRP-203ENST00000554074 CEP76Q8TAP6 659 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 IPO4Q8TEX9 1081 aaKnown RBP6.92□□□□□ -1.3
SLIRP-203ENST00000554074 UCMAQ8WVF2 138 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 PIGKQ92643 395 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 EEF2KMTQ96G04 330 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 PIWIL1Q96J94 861 aaKnown RBP6.92□□□□□ -1.3
SLIRP-203ENST00000554074 CNTNAP3BQ96NU0 1288 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 ACOX2Q99424 681 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 NUSAP1Q9BXS6 441 aaKnown RBP6.92□□□□□ -1.3
SLIRP-203ENST00000554074 CNTNAP3Q9BZ76 1288 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 ULBP1Q9BZM6 244 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 LRRC4Q9HBW1 653 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 ZDHHC4Q9NPG8 344 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 CNGB3Q9NQW8 809 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 CALCOCO1Q9P1Z2 691 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 THAP10Q9P2Z0 257 aaPredicted RBP6.92□□□□□ -1.3
SLIRP-203ENST00000554074 HESX1Q9UBX0 185 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 RASAL2Q9UJF2 1139 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 PILRBQ9UKJ0 227 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 NUDT5Q9UKK9 219 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 TSPAN16Q9UKR8 245 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 AGO1Q9UL18 857 aaKnown RBP6.92□□□□□ -1.3
SLIRP-203ENST00000554074 HBS1LQ9Y450 684 aaKnown RBP6.92□□□□□ -1.3
SLIRP-203ENST00000554074 NFE2L3Q9Y4A8 694 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 CEP295Q9C0D2 2601 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 PTPRBP23467 1997 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 DOCK4Q8N1I0 1966 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 SLC12A8A0AV02 714 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 TRIM49BA6NDI0 452 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 PATE3B3GLJ2 98 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 O00370 1275 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 TIMM44O43615 452 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 GNA14O95837 355 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 IGLV3-19P01714 112 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 CYBBP04839 570 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 SERPINF2P08697 491 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 CEACAM1P13688 526 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 NDUFV2P19404 249 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 PTMSP20962 102 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 HARS2P49590 506 aaKnown RBP6.91□□□□□ -1.3
SLIRP-203ENST00000554074 NOVA1P51513 510 aaKnown RBP6.91□□□□□ -1.3
SLIRP-203ENST00000554074 MARSP56192 900 aaKnown RBP6.91□□□□□ -1.3
SLIRP-203ENST00000554074 UBE2HP62256 183 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 GCNT1Q02742 428 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 RPL6Q02878 288 aaKnown RBP6.91□□□□□ -1.3
SLIRP-203ENST00000554074 ZNF33AQ06730 810 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 ADIGQ0VDE8 80 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 STARD3Q14849 445 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 CNGA2Q16280 664 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 GEN1Q17RS7 908 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 MPPE1Q53F39 396 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 MPP7Q5T2T1 576 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 SMYD5Q6GMV2 418 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 KIAA1211LQ6NV74 962 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 TTI2Q6NXR4 508 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 MSANTD2Q6P1R3 559 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 ANKS1BQ7Z6G8 1248 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 DENND1CQ8IV53 801 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 TMEFF1Q8IYR6 380 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 FRMD1Q8N878 549 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 LMO3Q8TAP4 145 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 SLC35F5Q8WV83 523 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 IRGQQ8WZA9 623 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 P2RY11Q96G91 374 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 ZNF419Q96HQ0 510 aaPredicted RBP6.91□□□□□ -1.3
SLIRP-203ENST00000554074 MRGPRX1Q96LB2 322 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 NT5C1BQ96P26 610 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 CAPN10Q9HC96 672 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 ABCC13Q9NSE7 274 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 TMEM74BQ9NUR3 256 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 PLK2Q9NYY3 685 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 USP36Q9P275 1121 aaKnown RBP6.91□□□□□ -1.3
SLIRP-203ENST00000554074 MAN1B1Q9UKM7 699 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 ANGPTL2Q9UKU9 493 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms