RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 ZNF487B1APH4 448 aa15.07■□□□□ 0
SHMT2-210ENST00000553950 TBX10O75333 385 aa15.07■□□□□ 0
SHMT2-210ENST00000553950 IGLV3-27P01718 113 aa15.07■□□□□ 0
SHMT2-210ENST00000553950 KRT1P04264 644 aa15.07■□□□□ 0
SHMT2-210ENST00000553950 FOSL2P15408 326 aa15.07■□□□□ 0
SHMT2-210ENST00000553950 PRLRP16471 622 aa15.07■□□□□ 0
SHMT2-210ENST00000553950 HDCP19113 662 aa15.07■□□□□ 0
SHMT2-210ENST00000553950 FSHRP23945 695 aa15.07■□□□□ 0
SHMT2-210ENST00000553950 WEE1P30291 646 aa15.07■□□□□ 0
SHMT2-210ENST00000553950 HARS2P49590 506 aaKnown RBP15.07■□□□□ 0
SHMT2-210ENST00000553950 COPS2P61201 443 aa15.07■□□□□ 0
SHMT2-210ENST00000553950 SLC7A9P82251 487 aa15.07■□□□□ 0
SHMT2-210ENST00000553950 CYP4F8P98187 520 aa15.07■□□□□ 0
SHMT2-210ENST00000553950 PDK2Q15119 407 aa15.07■□□□□ 0
SHMT2-210ENST00000553950 HABP4Q5JVS0 413 aaKnown RBP15.07■□□□□ 0
SHMT2-210ENST00000553950 DNTTIP2Q5QJE6 756 aaKnown RBP15.07■□□□□ 0
SHMT2-210ENST00000553950 ATAT1Q5SQI0 421 aa15.07■□□□□ 0
SHMT2-210ENST00000553950 GPR158Q5T848 1215 aa15.07■□□□□ 0
SHMT2-210ENST00000553950 FAM131BQ86XD5 332 aa15.07■□□□□ 0
SHMT2-210ENST00000553950 MIB1Q86YT6 1006 aa15.07■□□□□ 0
SHMT2-210ENST00000553950 MICALL1Q8N3F8 863 aa15.07■□□□□ 0
SHMT2-210ENST00000553950 KIAA1958Q8N8K9 716 aa15.07■□□□□ 0
SHMT2-210ENST00000553950 EXD1Q8NHP7 514 aa15.07■□□□□ 0
SHMT2-210ENST00000553950 PBKQ96KB5 322 aa15.07■□□□□ 0
SHMT2-210ENST00000553950 BTN2A3PQ96KV6 586 aa15.07■□□□□ 0
SHMT2-210ENST00000553950 WDR24Q96S15 920 aa15.07■□□□□ 0
SHMT2-210ENST00000553950 WDR6Q9NNW5 1121 aaKnown RBP15.07■□□□□ 0
SHMT2-210ENST00000553950 COX16Q9P0S2 106 aa15.07■□□□□ 0
SHMT2-210ENST00000553950 RCOR3Q9P2K3 495 aaPredicted RBP15.07■□□□□ 0
SHMT2-210ENST00000553950 SNX12Q9UMY4 172 aa15.07■□□□□ 0
SHMT2-210ENST00000553950 ARHGAP26Q9UNA1 814 aa15.07■□□□□ 0
SHMT2-210ENST00000553950 AP4E1Q9UPM8 1137 aa15.07■□□□□ 0
SHMT2-210ENST00000553950 ZNF510Q9Y2H8 683 aa15.07■□□□□ 0
SHMT2-210ENST00000553950 CDH23Q9H251 3354 aa15.06■□□□□ 0
SHMT2-210ENST00000553950 LINC01565O15544 149 aa15.06■□□□□ 0
SHMT2-210ENST00000553950 GJC1P36383 396 aa15.06■□□□□ 0
SHMT2-210ENST00000553950 RBM10P98175 930 aaKnown RBP15.06■□□□□ 0
SHMT2-210ENST00000553950 EIF4EBP2Q13542 120 aaPredicted RBP15.06■□□□□ 0
SHMT2-210ENST00000553950 ERMARDQ5T6L9 678 aa15.06■□□□□ 0
SHMT2-210ENST00000553950 SYCE2Q6PIF2 218 aa15.06■□□□□ 0
SHMT2-210ENST00000553950 ADAM32Q8TC27 787 aa15.06■□□□□ 0
SHMT2-210ENST00000553950 SLC39A13Q96H72 371 aa15.06■□□□□ 0
SHMT2-210ENST00000553950 FAM161BQ96MY7 647 aa15.06■□□□□ 0
SHMT2-210ENST00000553950 HAPLN3Q96S86 360 aa15.06■□□□□ 0
SHMT2-210ENST00000553950 NAP1L3Q99457 506 aaPredicted RBP15.06■□□□□ 0
SHMT2-210ENST00000553950 DDX50Q9BQ39 737 aaKnown RBP15.06■□□□□ 0
SHMT2-210ENST00000553950 SNRNP25Q9BV90 132 aaKnown RBP15.06■□□□□ 0
SHMT2-210ENST00000553950 TLR10Q9BXR5 811 aa15.06■□□□□ 0
SHMT2-210ENST00000553950 ZWILCHQ9H900 591 aa15.06■□□□□ 0
SHMT2-210ENST00000553950 PRDM16Q9HAZ2 1276 aa15.06■□□□□ 0
SHMT2-210ENST00000553950 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.06■□□□□ 0
SHMT2-210ENST00000553950 ARHGEF38Q9NXL2 777 aa15.06■□□□□ 0
SHMT2-210ENST00000553950 GDE1Q9NZC3 331 aa15.06■□□□□ 0
SHMT2-210ENST00000553950 PCSK1NQ9UHG2 260 aa15.06■□□□□ 0
SHMT2-210ENST00000553950 SFMBT1Q9UHJ3 866 aa15.06■□□□□ 0
SHMT2-210ENST00000553950 ZFP37Q9Y6Q3 630 aaPredicted RBP15.06■□□□□ 0
SHMT2-210ENST00000553950 KIF26AQ9ULI4 1882 aaPredicted RBP15.06■□□□□ 0
SHMT2-210ENST00000553950 DOCK8Q8NF50 2099 aa15.05■□□□□ 0
SHMT2-210ENST00000553950 C2orf78A6NCI8 922 aa15.05■□□□□ -0
SHMT2-210ENST00000553950 KCNK3O14649 394 aa15.05■□□□□ -0
SHMT2-210ENST00000553950 MSI1O43347 362 aaKnown RBP15.05■□□□□ -0
SHMT2-210ENST00000553950 ATP1A1P05023 1023 aaKnown RBP15.05■□□□□ -0
SHMT2-210ENST00000553950 TCF3P15923 654 aa15.05■□□□□ -0
SHMT2-210ENST00000553950 TFE3P19532 575 aaPredicted RBP15.05■□□□□ -0
SHMT2-210ENST00000553950 SLC11A2P49281 568 aa15.05■□□□□ -0
SHMT2-210ENST00000553950 PGFP49763 221 aa15.05■□□□□ -0
SHMT2-210ENST00000553950 TAS2R40P59535 323 aa15.05■□□□□ -0
SHMT2-210ENST00000553950 PITX1P78337 314 aaPredicted RBP15.05■□□□□ -0
SHMT2-210ENST00000553950 KRT81Q14533 505 aa15.05■□□□□ -0
SHMT2-210ENST00000553950 TEAD2Q15562 447 aa15.05■□□□□ -0
SHMT2-210ENST00000553950 DPYSL2Q16555 572 aa15.05■□□□□ -0
SHMT2-210ENST00000553950 SLC5A9Q2M3M2 681 aa15.05■□□□□ -0
SHMT2-210ENST00000553950 PAPD7Q5XG87 772 aaKnown RBP15.05■□□□□ -0
SHMT2-210ENST00000553950 TXNDC8Q6A555 127 aa15.05■□□□□ -0
SHMT2-210ENST00000553950 EP400NLQ6ZTU2 488 aa15.05■□□□□ -0
SHMT2-210ENST00000553950 CMTM8Q8IZV2 173 aa15.05■□□□□ -0
SHMT2-210ENST00000553950 ARFGAP1Q8N6T3 406 aa15.05■□□□□ -0
SHMT2-210ENST00000553950 C12orf76Q8N812 135 aaPredicted RBP15.05■□□□□ -0
SHMT2-210ENST00000553950 ARL14EPQ8N8R7 260 aaPredicted RBP15.05■□□□□ -0
SHMT2-210ENST00000553950 MAB21L3Q8N8X9 362 aa15.05■□□□□ -0
SHMT2-210ENST00000553950 SMRP1Q8NCR6 262 aa15.05■□□□□ -0
SHMT2-210ENST00000553950 AZIN2Q96A70 460 aa15.05■□□□□ -0
SHMT2-210ENST00000553950 FCRL2Q96LA5 508 aaPredicted RBP15.05■□□□□ -0
SHMT2-210ENST00000553950 EPAS1Q99814 870 aa15.05■□□□□ -0
SHMT2-210ENST00000553950 ZNF670Q9BS34 389 aa15.05■□□□□ -0
SHMT2-210ENST00000553950 TKTL2Q9H0I9 626 aa15.05■□□□□ -0
SHMT2-210ENST00000553950 CLEC1BQ9P126 229 aa15.05■□□□□ -0
SHMT2-210ENST00000553950 RNF14Q9UBS8 474 aa15.05■□□□□ -0
SHMT2-210ENST00000553950 CD207Q9UJ71 328 aa15.05■□□□□ -0
SHMT2-210ENST00000553950 NUDT5Q9UKK9 219 aa15.05■□□□□ -0
SHMT2-210ENST00000553950 FZD10Q9ULW2 581 aa15.05■□□□□ -0
SHMT2-210ENST00000553950 SAR1BQ9Y6B6 198 aa15.05■□□□□ -0
SHMT2-210ENST00000553950 DOCK4Q8N1I0 1966 aa15.05■□□□□ -0
SHMT2-210ENST00000553950 LRRD1A4D1F6 860 aa15.04■□□□□ -0
SHMT2-210ENST00000553950 H3BRJ5 948 aa15.04■□□□□ -0
SHMT2-210ENST00000553950 ENC1O14682 589 aa15.04■□□□□ -0
SHMT2-210ENST00000553950 DDX3YO15523 660 aaKnown RBP15.04■□□□□ -0
SHMT2-210ENST00000553950 ZRANB2O95218 330 aaKnown RBP eCLIP15.04■□□□□ -0
SHMT2-210ENST00000553950 RARAP10276 462 aa15.04■□□□□ -0
SHMT2-210ENST00000553950 PTPN7P35236 360 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms