RNA–Protein interactions for RNA: ENST00000553871.5

EFCAB11-204, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-204ENST00000553871 MATN1P21941 496 aa4.11□□□□□ -1.75
EFCAB11-204ENST00000553871 PAX3P23760 479 aa4.11□□□□□ -1.75
EFCAB11-204ENST00000553871 GDF5P43026 501 aa4.11□□□□□ -1.75
EFCAB11-204ENST00000553871 JAK3P52333 1124 aa4.11□□□□□ -1.75
EFCAB11-204ENST00000553871 ACTR2P61160 394 aa4.11□□□□□ -1.75
EFCAB11-204ENST00000553871 SIM1P81133 766 aaPredicted RBP4.11□□□□□ -1.75
EFCAB11-204ENST00000553871 TBRG1Q3YBR2 411 aa4.11□□□□□ -1.75
EFCAB11-204ENST00000553871 TRIM60Q495X7 471 aa4.11□□□□□ -1.75
EFCAB11-204ENST00000553871 FBXO47Q5MNV8 452 aa4.11□□□□□ -1.75
EFCAB11-204ENST00000553871 TMEM63BQ5T3F8 832 aa4.11□□□□□ -1.75
EFCAB11-204ENST00000553871 TTC22Q5TAA0 569 aa4.11□□□□□ -1.75
EFCAB11-204ENST00000553871 TBC1D3GQ6DHY5 549 aa4.11□□□□□ -1.75
EFCAB11-204ENST00000553871 TBC1D3CQ6IPX1 549 aa4.11□□□□□ -1.75
EFCAB11-204ENST00000553871 CEP85Q6P2H3 762 aa4.11□□□□□ -1.75
EFCAB11-204ENST00000553871 TMEM65Q6PI78 240 aa4.11□□□□□ -1.75
EFCAB11-204ENST00000553871 SYNE3Q6ZMZ3 975 aa4.11□□□□□ -1.75
EFCAB11-204ENST00000553871 SUGP1Q8IWZ8 645 aaKnown RBP4.11□□□□□ -1.75
EFCAB11-204ENST00000553871 TBC1D3Q8IZP1 549 aaPredicted RBP4.11□□□□□ -1.75
EFCAB11-204ENST00000553871 C12orf76Q8N812 135 aaPredicted RBP4.11□□□□□ -1.75
EFCAB11-204ENST00000553871 TERB1Q8NA31 727 aa4.11□□□□□ -1.75
EFCAB11-204ENST00000553871 OR52L2PQ8NGH6 319 aa4.11□□□□□ -1.75
EFCAB11-204ENST00000553871 SPPL3Q8TCT6 385 aa4.11□□□□□ -1.75
EFCAB11-204ENST00000553871 CSGALNACT1Q8TDX6 532 aa4.11□□□□□ -1.75
EFCAB11-204ENST00000553871 MCRS1Q96EZ8 462 aa4.11□□□□□ -1.75
EFCAB11-204ENST00000553871 PAAF1Q9BRP4 392 aa4.11□□□□□ -1.75
EFCAB11-204ENST00000553871 SAP30LQ9HAJ7 183 aa4.11□□□□□ -1.75
EFCAB11-204ENST00000553871 FOXJ2Q9P0K8 574 aa4.11□□□□□ -1.75
EFCAB11-204ENST00000553871 SH3BP4Q9P0V3 963 aa4.11□□□□□ -1.75
EFCAB11-204ENST00000553871 SLC17A6Q9P2U8 582 aa4.11□□□□□ -1.75
EFCAB11-204ENST00000553871 TLK1Q9UKI8 766 aa4.11□□□□□ -1.75
EFCAB11-204ENST00000553871 TRPC5Q9UL62 973 aaPredicted RBP4.11□□□□□ -1.75
EFCAB11-204ENST00000553871 FER1L4A9Z1Z3 1794 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 A0A087X1B8 175 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 CCDC187A0A096LP49 1063 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 GXYLT2A0PJZ3 443 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 TTC34A8MYJ7 566 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 E7EVH7 732 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 FOXN1O15353 648 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 PRAMEF2O60811 474 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 HNRNPCP07910 306 aaKnown RBP eCLIP4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 ELFN1P0C7U0 828 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 GPD1P21695 349 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 GALNSP34059 522 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 GRK5P34947 590 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 MCM2P49736 904 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 RARRES1P49788 294 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 RBM5P52756 815 aaKnown RBP eCLIP4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 KRTAP10-2P60368 255 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 CYP4F2P78329 520 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 GPC5P78333 572 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 RAE1P78406 368 aaKnown RBP4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 POU5F1BQ06416 359 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 DNASE1L3Q13609 305 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 FHL2Q14192 279 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 AAK1Q2M2I8 961 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 GALNTL6Q49A17 601 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 CC2D1BQ5T0F9 858 aaKnown RBP4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 DGAT2L7PQ6IED9 249 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 WDR93Q6P2C0 686 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 CYP26C1Q6V0L0 522 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 TRIM72Q6ZMU5 477 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 DBX2Q6ZNG2 339 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 SYT13Q7L8C5 426 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 MRGPRGQ86SM5 289 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 TMEM57Q8N5G2 664 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 CEP70Q8NHQ1 597 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 MAFAQ8NHW3 353 aaPredicted RBP4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 RILPL2Q969X0 211 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 UBXN10Q96LJ8 280 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 MECRQ9BV79 373 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 ADGRE3Q9BY15 652 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 IL17RBQ9NRM6 502 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 VPS45Q9NRW7 570 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 TMLHEQ9NVH6 421 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 SAGE1Q9NXZ1 904 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 KCND3Q9UK17 655 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 FEM1BQ9UK73 627 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 RAB21Q9UL25 225 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 ZBTB1Q9Y2K1 713 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 RRP7AQ9Y3A4 280 aaKnown RBP4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 ENTPD2Q9Y5L3 495 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 LRRFIP2Q9Y608 721 aaKnown RBP4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 COL4A3Q01955 1670 aa4.1□□□□□ -1.75
EFCAB11-204ENST00000553871 RRN3P2A6NIE6 340 aa4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 SLC38A8A6NNN8 435 aa4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 M0QYT0 321 aa4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 NKX2-8O15522 239 aa4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 FAM155BO75949 473 aa4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 JTBO76095 146 aa4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 C1RP00736 705 aa4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 ALDOAP04075 364 aaKnown RBP4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 TK1P04183 234 aa4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 SLC8A1P32418 973 aa4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 PCP4P48539 62 aa4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 CACNA2D1P54289 1103 aa4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 SOX10P56693 466 aa4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 WDR5P61964 334 aaKnown RBP4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 ZXDAP98168 799 aa4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 HOXA4Q00056 320 aaPredicted RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms